PMC Links for GEO Profiles (Select 117103461) - PMC

Select item 105700431.

Recovery of protein synthesis to assay DNA repair activity in transcribed genes in living cells and tissues

Melanie van der Woude, Carlota Davó-Martínez, Karen L Thijssen, Wim Vermeulen, Hannes Lans

Nucleic Acids Res. 2023 Oct 13; 51(18): e93. Published online 2023 Jul 31. doi: 10.1093/nar/gkad642

PMCID:: PMC10570043

Select item 101131562.

The DREAM complex functions as conserved master regulator of somatic DNA-repair capacities

Arturo Bujarrabal-Dueso, Georg Sendtner, David H. Meyer, Georgia Chatzinikolaou, Kalliopi Stratigi, George A. Garinis, Björn Schumacher

Nat Struct Mol Biol. 2023; 30(4): 475–488. Published online 2023 Mar 23. doi: 10.1038/s41594-023-00942-8

PMCID:: PMC10113156

Abstract Article PDF–13M

Select item 90207163.

A modified TurboID approach identifies tissue-specific centriolar components in C. elegans

Elisabeth Holzer, Cornelia Rumpf-Kienzl, Sebastian Falk, Alexander Dammermann

PLoS Genet. 2022 Apr; 18(4): e1010150. Published online 2022 Apr 20. doi: 10.1371/journal.pgen.1010150

Correction in:: PLoS Genet. 2023 Feb; 19(2): e1010645.

PMCID:: PMC9020716

Abstract Article PDF–2.0M

Select item 81928554.

C. elegans survival assays to discern global and transcription-coupled nucleotide excision repair

Melanie van der Woude, Hannes Lans

STAR Protoc. 2021 Jun 18; 2(2): 100586. Published online 2021 Jun 8. doi: 10.1016/j.xpro.2021.100586

PMCID:: PMC8192855

Abstract Article PDF–2.4M

Select item 79951765.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 76112186.

Elongation factor ELOF1 drives transcription-coupled repair and prevents genome instability

Marit E Geijer, Di Zhou, Kathiresan Selvam, Barbara Steurer, Chirantani Mukherjee, Bastiaan Evers, Simona Cugusi, Marvin van Toorn, Melanie van der Woude, Roel C. Janssens, Yannick P Kok, Wenzhi Gong, Anja Raams, Calvin SY Lo, Joyce HG Lebbink, Bart Geverts, Dalton A Plummer, Karel Bezstarosti, Arjan F Theil, Richard Mitter, Adriaan B Houtsmuller, Wim Vermeulen, Jeroen AA Demmers, Shisheng Li, Marcel ATM van Vugt, Hannes Lans, René Bernards, Jesper Q Svejstrup, Arnab Ray Chaudhuri, John J Wyrick, Jurgen A Marteijn

Nat Cell Biol. Author manuscript; available in PMC 2021 Dec 9.

Published in final edited form as: Nat Cell Biol. 2021 Jun; 23(6): 608–619. Published online 2021 Jun 9. doi: 10.1038/s41556-021-00692-z

Correction in:: Nat Cell Biol. 2021 Jul; 23(7): 809.

PMCID:: PMC7611218

Abstract Article PDF–6.8M

Select item 75902387.

Nucleotide Excision Repair, XPA-1, and Translesion Synthesis Complex, POLZ-1 and REV-1, are Critical for Interstrand Crosslink Repair in C. elegans Germ Cells

Sinae Oh, Woori Bae, Mohammad A. Alfhili, Myon Hee Lee

Biochemistry. Author manuscript; available in PMC 2021 Sep 29.

Published in final edited form as: Biochemistry. 2020 Sep 29; 59(38): 3554–3561. Published online 2020 Sep 18. doi: 10.1021/acs.biochem.0c00719

PMCID:: PMC7590238

Abstract Article PDF–1.6M

Select item 62165908.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 57661649.

Systematic analysis of DNA crosslink repair pathways during development and aging in Caenorhabditis elegans

David M. Wilson, III, Matthias Rieckher, Ashley B. Williams, Björn Schumacher

Nucleic Acids Res. 2017 Sep 19; 45(16): 9467–9480. Published online 2017 Jul 29. doi: 10.1093/nar/gkx660

PMCID:: PMC5766164

Abstract Article PDF–6.5M

Select item 488682110.

A C. elegans homolog for the UV-hypersensitivity syndrome disease gene UVSSA

Vipin Babu, Björn Schumacher

DNA Repair (Amst) Author manuscript; available in PMC 2016 Nov 1.

Published in final edited form as: DNA Repair (Amst). 2016 May; 41: 8–15. Published online 2016 Mar 25. doi: 10.1016/j.dnarep.2016.03.008

PMCID:: PMC4886821

Abstract Article PDF–1.4M

Select item 478147111.

DNA repair.

Nigel O'Neil, Ann Rose

WormBook. 2006 : 1–12. Published online 2006 Jan 13. doi: 10.1895/wormbook.1.54.1

PMCID:: PMC4781471

Abstract Article

Select item 366481212.

Active transcriptomic and proteomic reprogramming in the C. elegans nucleotide excision repair mutant xpa-1

Katarzyna D. Arczewska, Gisele G. Tomazella, Jessica M. Lindvall, Henok Kassahun, Silvia Maglioni, Alessandro Torgovnick, Johan Henriksson, Olli Matilainen, Bryce J. Marquis, Bryant C. Nelson, Pawel Jaruga, Eshrat Babaie, Carina I. Holmberg, Thomas R. Bürglin, Natascia Ventura, Bernd Thiede, Hilde Nilsen

Nucleic Acids Res. 2013 May; 41(10): 5368–5381. Published online 2013 Apr 10. doi: 10.1093/nar/gkt225