PMC Links for GEO Profiles (Select 117129859) - PMC

Select item 83311831.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951762.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 76151173.

DNSN-1 recruits GINS for CMG helicase assembly during DNA replication initiation in C. elegans

Yisui Xia, Remi Sonneville, Michael Jenkyn-Bedford, Liqin Ji, Constance Alabert, Ye Hong, Joseph T.P. Yeeles, Karim P.M. Labib

Science. Author manuscript; available in PMC 2023 Sep 23.

Published in final edited form as: Science. 2023 Aug 17; 381(6664): eadi4932. Published online 2023 Aug 17. doi: 10.1126/science.adi4932

PMCID:: PMC7615117

Abstract Article PDF–3.2M

Select item 62165904.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 54101695.

CUL-2^LRR-1 and UBXN-3/FAF1 drive replisome disassembly during DNA replication termination and mitosis

Remi Sonneville, Sara Priego Moreno, Axel Knebel, Clare Johnson, C. James Hastie, Anton Gartner, Agnieszka Gambus, Karim Labib

Nat Cell Biol. Author manuscript; available in PMC 2017 Oct 3.

Published in final edited form as: Nat Cell Biol. 2017 May; 19(5): 468–479. Published online 2017 Apr 3. doi: 10.1038/ncb3500

PMCID:: PMC5410169

Abstract Article PDF–2.6M

Select item 49426126.

The RNA-binding protein repertoire of Arabidopsis thaliana

Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring

Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766

PMCID:: PMC4942612

Abstract Article PDF–1.2M

Select item 40337757.

PAR-4/LKB1 regulates DNA replication during asynchronous division of the early C. elegans embryo

Laura Benkemoun, Catherine Descoteaux, Nicolas T. Chartier, Lionel Pintard, Jean-Claude Labbé

J Cell Biol. 2014 May 26; 205(4): 447–455. doi: 10.1083/jcb.201312029

PMCID:: PMC4033775

Abstract Article PDF–1.9M

Select item 31020778.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 30579239.

Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network

Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal

Nat Methods. Author manuscript; available in PMC 2011 Mar 15.

Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279

PMCID:: PMC3057923

Abstract Article PDF–3.0M

Select item 278742810.

A Genomewide RNAi Screen for Genes That Affect the Stability, Distribution and Function of P Granules in Caenorhabditis elegans

Dustin L. Updike, Susan Strome

Genetics. 2009 Dec; 183(4): 1397–1419. doi: 10.1534/genetics.109.110171

PMCID:: PMC2787428

Abstract Article PDF–6.6M

Select item 259647811.

A protein domain-based interactome network for C. elegans early embryogenesis

Mike Boxem, Zoltan Maliga, Niels Klitgord, Na Li, Irma Lemmens, Miyeko Mana, Lorenzo de Lichtervelde, Joram D. Mul, Diederik van de Peut, Maxime Devos, Nicolas Simonis, Muhammed A. Yildirim, Murat Cokol, Huey-Ling Kao, Anne-Sophie de Smet, Haidong Wang, Anne-Lore Schlaitz, Tong Hao, Stuart Milstein, Changyu Fan, Mike Tipsword, Kevin Drew, Matilde Galli, Kahn Rhrissorrakrai, David Drechsel, Daphne Koller, Frederick P. Roth, Lilia M. Iakoucheva, A. Keith Dunker, Richard Bonneau, Kristin C. Gunsalus, David E. Hill, Fabio Piano, Jan Tavernier, Sander van den Heuvel, Anthony A. Hyman, Marc Vidal

Cell. Author manuscript; available in PMC 2009 Aug 8.

Published in final edited form as: Cell. 2008 Aug 8; 134(3): 534–545. doi: 10.1016/j.cell.2008.07.009

Correction in:: volume 151 on page 1633

PMCID:: PMC2596478

Abstract Article PDF–4.0M

Select item 206388512.

Excess Mcm2–7 license dormant origins of replication that can be used under conditions of replicative stress

Anna M. Woodward, Thomas Göhler, M. Gloria Luciani, Maren Oehlmann, Xinquan Ge, Anton Gartner, Dean A. Jackson, J. Julian Blow

J Cell Biol. 2006 Jun 5; 173(5): 673–683. doi: 10.1083/jcb.200602108

PMCID:: PMC2063885

Abstract Article PDF–2.7M

Select item 108828913.

Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression

Julius Halaschek-Wiener, Jaswinder S. Khattra, Sheldon McKay, Anatoli Pouzyrev, Jeff M. Stott, George S. Yang, Robert A. Holt, Steven J.M. Jones, Marco A. Marra, Angela R. Brooks-Wilson, Donald L. Riddle

Genome Res. 2005 May; 15(5): 603–615. doi: 10.1101/gr.3274805

PMCID:: PMC1088289

Abstract Article PDF–632K

Select item 21269214.

Genome-Wide RNAi of C. elegans Using the Hypersensitive rrf-3 Strain Reveals Novel Gene Functions

Femke Simmer, Celine Moorman, Alexander M van der Linden, Ewart Kuijk, Peter V.E van den Berghe, Ravi S Kamath, Andrew G Fraser, Julie Ahringer, Ronald H. A Plasterk

PLoS Biol. 2003 Oct; 1(1): e12. Published online 2003 Oct 13. doi: 10.1371/journal.pbio.0000012

PMCID:: PMC212692

Abstract Article PDF–140K

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