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Items: 11

1.
A modified TurboID approach identifies tissue-specific centriolar components in C. elegans
Elisabeth Holzer, Cornelia Rumpf-Kienzl, Sebastian Falk, Alexander Dammermann
PLoS Genet. 2022 Apr; 18(4): e1010150. Published online 2022 Apr 20. doi: 10.1371/journal.pgen.1010150
Correction in:
PLoS Genet. 2023 Feb; 19(2): e1010645.
PMCID:
PMC9020716
AbstractArticlePDF–2.0M
2.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
3.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
4.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
5.
Translational Control of the Oogenic Program by Components of OMA Ribonucleoprotein Particles in Caenorhabditis elegans
Caroline A. Spike, Donna Coetzee, Yuichi Nishi, Tugba Guven-Ozkan, Marieke Oldenbroek, Ikuko Yamamoto, Rueyling Lin, David Greenstein
Genetics. 2014 Dec; 198(4): 1513–1533. Published online 2014 Sep 26. doi: 10.1534/genetics.114.168823
PMCID:
PMC4256769
AbstractArticlePDF–9.4M
6.
SH3 interactome conserves general function over specific form
Xiaofeng Xin, David Gfeller, Jackie Cheng, Raffi Tonikian, Lin Sun, Ailan Guo, Lianet Lopez, Alevtina Pavlenco, Adenrele Akintobi, Yingnan Zhang, Jean-François Rual, Bridget Currell, Somasekar Seshagiri, Tong Hao, Xinping Yang, Yun A Shen, Kourosh Salehi-Ashtiani, Jingjing Li, Aaron T Cheng, Dryden Bouamalay, Adrien Lugari, David E Hill, Mark L Grimes, David G Drubin, Barth D Grant, Marc Vidal, Charles Boone, Sachdev S Sidhu, Gary D Bader
Mol Syst Biol. 2013; 9: 652. Published online 2013 Apr 2. doi: 10.1038/msb.2013.9
PMCID:
PMC3658277
AbstractArticlePDF–2.3M
7.
Phylogenetic and Molecular Characterization of the Splicing Factor RBM4
Chia-Chen Lu, Tz-Hao Chen, Jhe-Rong Wu, Hung-Hsi Chen, Hsin-Yi Yu, Woan-Yuh Tarn
PLoS One. 2013; 8(3): e59092. Published online 2013 Mar 19. doi: 10.1371/journal.pone.0059092
PMCID:
PMC3602429
AbstractArticlePDF–4.2M
8.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
9.
Empirically-controlled mapping of the Caenorhabditis elegans protein-protein interactome network
Nicolas Simonis, Jean-François Rual, Anne-Ruxandra Carvunis, Murat Tasan, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Julie M Sahalie, Kavitha Venkatesan, Fana Gebreab, Sebiha Cevik, Niels Klitgord, Changyu Fan, Pascal Braun, Ning Li, Nono Ayivi-Guedehoussou, Elizabeth Dann, Nicolas Bertin, David Szeto, Amélie Dricot, Muhammed A Yildirim, Chenwei Lin, Anne-Sophie de Smet, Huey-Ling Kao, Christophe Simon, Alex Smolyar, Jin Sook Ahn, Muneesh Tewari, Mike Boxem, Stuart Milstein, Haiyuan Yu, Matija Dreze, Jean Vandenhaute, Kristin C Gunsalus, Michael E Cusick, David E Hill, Jan Tavernier, Frederick P Roth, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2011 Mar 15.
Published in final edited form as: Nat Methods. 2009 Jan; 6(1): 47–54. doi: 10.1038/nmeth.1279
PMCID:
PMC3057923
AbstractArticlePDF–3.0M
10.
Shifted Transversal Design smart-pooling for high coverage interactome mapping
Xiaofeng Xin, Jean-François Rual, Tomoko Hirozane-Kishikawa, David E. Hill, Marc Vidal, Charles Boone, Nicolas Thierry-Mieg
Genome Res. 2009 Jul; 19(7): 1262–1269. doi: 10.1101/gr.090019.108
PMCID:
PMC2704426
AbstractArticlePDF–855K
11.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M

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