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Items: 17

1.
The S. cerevisiae m6A-reader Pho92 promotes timely meiotic recombination by controlling key methylated transcripts
Jérémy Scutenaire, Damien Plassard, Mélody Matelot, Tommaso Villa, Julie Zumsteg, Domenico Libri, Bertrand Séraphin
Nucleic Acids Res. 2023 Jan 25; 51(2): 517–535. Published online 2022 Aug 8. doi: 10.1093/nar/gkac640
PMCID:
PMC9881176
AbstractArticlePDF–7.3M
2.
Pairwise and higher order genetic interactions during the evolution of a tRNA
Júlia Domingo, Guillaume Diss, Ben Lehner
Nature. Author manuscript; available in PMC 2018 Nov 30.
Published in final edited form as: Nature. 2018 Jun; 558(7708): 117–121. Published online 2018 May 30. doi: 10.1038/s41586-018-0170-7
PMCID:
PMC6193533
AbstractArticlePDF–5.2M
3.
Multi-environment fitness landscapes of a tRNA gene
Chuan Li, Jianzhi Zhang
Nat Ecol Evol. Author manuscript; available in PMC 2018 Oct 23.
Published in final edited form as: Nat Ecol Evol. 2018 Jun; 2(6): 1025–1032. Published online 2018 Apr 23. doi: 10.1038/s41559-018-0549-8
PMCID:
PMC5966336
AbstractArticlePDF–751K
4.
The fitness landscape of a tRNA gene
Chuan Li, Wenfeng Qian, Calum J. Maclean, Jianzhi Zhang
Science. Author manuscript; available in PMC 2016 Jun 6.
Published in final edited form as: Science. 2016 May 13; 352(6287): 837–840. Published online 2016 Apr 14. doi: 10.1126/science.aae0568
PMCID:
PMC4894649
AbstractArticlePDF–1020K
5.
Target selection by natural and redesigned PUF proteins
Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens
Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112
PMCID:
PMC4703012
AbstractArticlePDF–1.3M
6.
A Comprehensive tRNA Deletion Library Unravels the Genetic Architecture of the tRNA Pool
Zohar Bloom-Ackermann, Sivan Navon, Hila Gingold, Ruth Towers, Yitzhak Pilpel, Orna Dahan
PLoS Genet. 2014 Jan; 10(1): e1004084. Published online 2014 Jan 16. doi: 10.1371/journal.pgen.1004084
PMCID:
PMC3894157
AbstractArticlePDF–1.3M
7.
tRNA genes rapidly change in evolution to meet novel translational demands
Avihu H Yona, Zohar Bloom-Ackermann, Idan Frumkin, Victor Hanson-Smith, Yoav Charpak-Amikam, Qinghua Feng, Jef D Boeke, Orna Dahan, Yitzhak Pilpel
eLife. 2013; 2: e01339. Published online 2013 Dec 20. doi: 10.7554/eLife.01339
PMCID:
PMC3868979
AbstractArticlePDF–2.7M
8.
A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes
Yatendra Kumar, Purnima Bhargava
BMC Genomics. 2013; 14: 402. Published online 2013 Jun 17. doi: 10.1186/1471-2164-14-402
PMCID:
PMC3698015
AbstractArticlePDF–1.3M
9.
Retrotransposition is associated with genome instability during chronological aging
Patrick H. Maxwell, William C. Burhans, M. Joan Curcio
Proc Natl Acad Sci U S A. 2011 Dec 20; 108(51): 20376–20381. Published online 2011 Oct 20. doi: 10.1073/pnas.1100271108
PMCID:
PMC3251071
AbstractArticlePDF–849K
10.
GtRNAdb: a database of transfer RNA genes detected in genomic sequence
Patricia P. Chan, Todd M. Lowe
Nucleic Acids Res. 2009 Jan; 37(Database issue): D93–D97. Published online 2008 Nov 4. doi: 10.1093/nar/gkn787
PMCID:
PMC2686519
AbstractArticlePDF–6.1M
11.
Eukaryotic Wobble Uridine Modifications Promote a Functionally Redundant Decoding System
Marcus J. O. Johansson, Anders Esberg, Bo Huang, Glenn R. Björk, Anders S. Byström
Mol Cell Biol. 2008 May; 28(10): 3301–3312. Published online 2008 Mar 10. doi: 10.1128/MCB.01542-07
PMCID:
PMC2423140
AbstractArticlePDF–1.1M
12.
Deletion of a Single-Copy Trna Affects Microtubule Function in Saccharomyces Cerevisiae
R. A. Reijo, D. S. Cho, T. C. Huffaker
Genetics. 1993 Dec; 135(4): 955–962. doi: 10.1093/genetics/135.4.955
PMCID:
PMC1205756
SummaryPDF–3.1M
13.
A Rare Trna-Arg(ccu) That Regulates Ty1 Element Ribosomal Frameshifting Is Essential for Ty1 Retrotransposition in Saccharomyces Cerevisiae
K. Kawakami, S. Pande, B. Faiola, D. P. Moore, J. D. Boeke, P. J. Farabaugh, J. N. Strathern, Y. Nakamura, D. J. Garfinkel
Genetics. 1993 Oct; 135(2): 309–320. doi: 10.1093/genetics/135.2.309
PMCID:
PMC1205637
SummaryPDF–4.1M
14.
Ty Element-Induced Temperature-Sensitive Mutations of Saccharomyces Cerevisiae
K. Kawakami, B. K. Shafer, D. J. Garfinkel, J. N. Strathern, Y. Nakamura
Genetics. 1992 Aug; 131(4): 821–832. doi: 10.1093/genetics/131.4.821
PMCID:
PMC1205095
SummaryPDF–5.8M
15.
Translational Accuracy during Exponential, Postdiauxic, and Stationary Growth Phases in Saccharomyces cerevisiae
Guillaume Stahl, Samia N. Ben Salem, Lifeng Chen, Bing Zhao, Philip J. Farabaugh
Eukaryot Cell. 2004 Apr; 3(2): 331–338. doi: 10.1128/EC.3.2.331-338.2004
PMCID:
PMC387642
AbstractArticlePDF–435K
16.
tRNA genes and retroelements in the yeast genome.
J Hani, H Feldmann
Nucleic Acids Res. 1998 Feb 1; 26(3): 689–696. doi: 10.1093/nar/26.3.689
PMCID:
PMC147333
SummaryPDF–313K
17.
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
T M Lowe, S R Eddy
Nucleic Acids Res. 1997 Mar 1; 25(5): 955–964. doi: 10.1093/nar/25.5.955
PMCID:
PMC146525
SummaryPDF–106K

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