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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107096522.

The separation pin distinguishes the pro– and anti–recombinogenic functions of Saccharomyces cerevisiae Srs2

Aviv Meir, Vivek B. Raina, Carly E. Rivera, Léa Marie, Lorraine S. Symington, Eric C. Greene

Nat Commun. 2023; 14: 8144. Published online 2023 Dec 8. doi: 10.1038/s41467-023-43918-4

PMCID:: PMC10709652

Abstract Article PDF–3.8M

Select item 107001383.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 104802144.

The COMPASS subunit Spp1 protects nascent DNA at the Tus/Ter replication fork barrier by limiting DNA availability to nucleases

Nagham Ghaddar, Yves Corda, Pierre Luciano, Martina Galli, Ylli Doksani, Vincent Géli

Nat Commun. 2023; 14: 5430. Published online 2023 Sep 5. doi: 10.1038/s41467-023-41100-4

PMCID:: PMC10480214

Abstract Article PDF–2.4M

Select item 102333685.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 96296216.

Comprehensive characterization of the Hsp70 interactome reveals novel client proteins and interactions mediated by posttranslational modifications

Nitika, Bo Zheng, Linhao Ruan, Jake T. Kline, Siddhi Omkar, Jacek Sikora, Mara Texeira Torres, Yuhao Wang, Jade E. Takakuwa, Romain Huguet, Cinzia Klemm, Verónica A. Segarra, Matthew J. Winters, Peter M. Pryciak, Peter H. Thorpe, Kazuo Tatebayashi, Rong Li, Luca Fornelli, Andrew W. Truman

PLoS Biol. 2022 Oct; 20(10): e3001839. Published online 2022 Oct 21. doi: 10.1371/journal.pbio.3001839

PMCID:: PMC9629621

Abstract Article PDF–3.4M

Select item 92098117.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 87489888.

Mechanism for inverted-repeat recombination induced by a replication fork barrier

Léa Marie, Lorraine S. Symington

Nat Commun. 2022; 13: 32. Published online 2022 Jan 10. doi: 10.1038/s41467-021-27443-w

PMCID:: PMC8748988

Abstract Article PDF–24M

Select item 85710639.

Systems-level effects of allosteric perturbations to a model molecular switch

Tina Perica, Christopher J. P. Mathy, Jiewei Xu, Gwendolyn M. Jang, Yang Zhang, Robyn Kaake, Noah Ollikainen, Hannes Braberg, Danielle L. Swaney, David G. Lambright, Mark J. S. Kelly, Nevan J. Krogan, Tanja Kortemme

Nature. Author manuscript; available in PMC 2022 May 1.

Published in final edited form as: Nature. 2021 Nov; 599(7883): 152–157. Published online 2021 Oct 13. doi: 10.1038/s41586-021-03982-6

PMCID:: PMC8571063

Abstract Article PDF–2.7M

Select item 811502410.

Physical and genetic assays for the study of DNA joint molecules metabolism and multi-invasion-induced rearrangements in S. cerevisiae

Aurèle Piazza, Pallavi Rajput, Wolf-Dietrich Heyer

Methods Mol Biol. Author manuscript; available in PMC 2022 Jan 1.

Published in final edited form as: Methods Mol Biol. 2021; 2153: 535–554. doi: 10.1007/978-1-0716-0644-5_36

PMCID:: PMC8115024

Abstract Article PDF–1.6M

Select item 803282711.

Smc5/6 functions with Sgs1-Top3-Rmi1 to complete chromosome replication at natural pause sites

Sumedha Agashe, Chinnu Rose Joseph, Teresa Anne Clarisse Reyes, Demis Menolfi, Michele Giannattasio, Anja Waizenegger, Barnabas Szakal, Dana Branzei

Nat Commun. 2021; 12: 2111. Published online 2021 Apr 8. doi: 10.1038/s41467-021-22217-w

PMCID:: PMC8032827

Abstract Article PDF–2.9M

Select item 773679812.

Interstitial telomere sequences disrupt break-induced replication and drive formation of ectopic telomeres

Elizabeth A Stivison, Kati J Young, Lorraine S Symington

Nucleic Acids Res. 2020 Dec 16; 48(22): 12697–12710. Published online 2020 Dec 2. doi: 10.1093/nar/gkaa1081

PMCID:: PMC7736798

Abstract Article PDF–994K

Select item 738635413.

DNA HELICASE MPH1^FANCM ENSURES MEIOTIC RECOMBINATION BETWEEN PARENTAL CHROMOSOMES BY DISSOCIATING PRECOCIOUS DISPLACEMENT LOOPS

Rima Sandhu, Francisco Monge Neria, Jesus Monge Neria, Xiangyu Chen, Nancy M. Hollingsworth, G. Valentin Börner

Dev Cell. Author manuscript; available in PMC 2021 May 18.

Published in final edited form as: Dev Cell. 2020 May 18; 53(4): 458–472.e5. Published online 2020 May 7. doi: 10.1016/j.devcel.2020.04.010

PMCID:: PMC7386354

Abstract Article PDF–3.1M

Select item 731142414.

Rad9/53BP1 promotes DNA repair via crossover recombination by limiting the Sgs1 and Mph1 helicases

Matteo Ferrari, Chetan C. Rawal, Samuele Lodovichi, Maria Y. Vietri, Achille Pellicioli

Nat Commun. 2020; 11: 3181. Published online 2020 Jun 23. doi: 10.1038/s41467-020-16997-w

PMCID:: PMC7311424

Abstract Article PDF–1.5M

Select item 714568315.

Inactivation of folylpolyglutamate synthetase Met7 results in genome instability driven by an increased dUTP/dTTP ratio

Tobias T Schmidt, Sushma Sharma, Gloria X Reyes, Anna Kolodziejczak, Tina Wagner, Brian Luke, Anders Hofer, Andrei Chabes, Hans Hombauer

Nucleic Acids Res. 2020 Jan 10; 48(1): 264–277. Published online 2019 Oct 24. doi: 10.1093/nar/gkz1006

PMCID:: PMC7145683

Abstract Article PDF–3.9M

Select item 708593216.

Transfer of the Septin Ring to Cytokinetic Remnants in ER stress Directs Age-Sensitive Cell Cycle Re-entry

Jesse T. Chao, Francisco Piña, Masayuki Onishi, Yifat Cohen, Ya-Shiuan Lai, Maya Schuldiner, Maho Niwa

Dev Cell. Author manuscript; available in PMC 2020 Oct 21.

Published in final edited form as: Dev Cell. 2019 Oct 21; 51(2): 173–191.e5. Published online 2019 Sep 26. doi: 10.1016/j.devcel.2019.08.017

PMCID:: PMC7085932

Abstract Article PDF–2.5M

Select item 671577417.

Network Rewiring of Homologous Recombination Enzymes during Mitotic Proliferation and Meiosis

Philipp Wild, Aitor Susperregui, Ilaria Piazza, Christian Dörig, Ashwini Oke, Meret Arter, Miyuki Yamaguchi, Alexander T. Hilditch, Karla Vuina, Ki Choi Chan, Tatiana Gromova, James E. Haber, Jennifer C. Fung, Paola Picotti, Joao Matos

Mol Cell. 2019 Aug 22; 75(4): 859–874.e4. doi: 10.1016/j.molcel.2019.06.022

PMCID:: PMC6715774

Abstract Article

Select item 670744718.

Role of the Srs2–Rad51 Interaction Domain in Crossover Control in Saccharomyces cerevisiae

Shirin S. Jenkins, Steven Gore, Xiaoge Guo, Jie Liu, Christopher Ede, Xavier Veaute, Sue Jinks-Robertson, Stephen C. Kowalczykowski, Wolf-Dietrich Heyer

Genetics. 2019 Aug; 212(4): 1133–1145. Published online 2019 May 29. doi: 10.1534/genetics.119.302337