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Items: 1 to 20 of 22

1.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
2.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
3.
Genome-wide imaging screen uncovers molecular determinants of arsenite-induced protein aggregation and toxicity
Stefanie Andersson, Antonia Romero, Joana Isabel Rodrigues, Sansan Hua, Xinxin Hao, Therese Jacobson, Vivien Karl, Nathalie Becker, Arghavan Ashouri, Sebastien Rauch, Thomas Nyström, Beidong Liu, Markus J. Tamás
J Cell Sci. 2021 Jun 1; 134(11): jcs258338. Published online 2021 Jun 4. doi: 10.1242/jcs.258338
PMCID:
PMC8214759
AbstractArticle
4.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
5.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
6.
Interrogation of γ-tubulin alleles using high-resolution fitness measurements reveals a distinct cytoplasmic function in spindle alignment
Kristian Shulist, Eric Yen, Susanne Kaitna, Allen Leary, Alexandra Decterov, Debarun Gupta, Jackie Vogel
Sci Rep. 2017; 7: 11398. Published online 2017 Sep 12. doi: 10.1038/s41598-017-11789-7
Correction in:
Sci Rep. 2018; 8: 2513.
PMCID:
PMC5595808
AbstractArticlePDF–5.9M
7.
A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis
Vasso Makrantoni, Adam Ciesiolka, Conor Lawless, Josefin Fernius, Adele Marston, David Lydall, Michael J. R. Stark
G3 (Bethesda) 2017 Sep; 7(9): 3203–3215. Published online 2017 Jul 28. doi: 10.1534/g3.117.300089
PMCID:
PMC5592945
AbstractArticlePDF–1.7M
8.
Disentangling genetic and epigenetic determinants of ultrafast adaptation
Arne B Gjuvsland, Enikö Zörgö, Jeevan KA Samy, Simon Stenberg, Ibrahim H Demirsoy, Francisco Roque, Ewa Maciaszczyk‐Dziubinska, Magdalena Migocka, Elisa Alonso‐Perez, Martin Zackrisson, Robert Wysocki, Markus J Tamás, Inge Jonassen, Stig W Omholt, Jonas Warringer
Mol Syst Biol. 2016 Dec; 12(12): 892. Published online 2016 Dec 15. doi: 10.15252/msb.20166951
PMCID:
PMC5199126
AbstractArticlePDF–767K
9.
Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae
Dimitris Kyriakou, Emmanouil Stavrou, Panayiota Demosthenous, Georgia Angelidou, Bryan-Joseph San Luis, Charles Boone, Vasilis J. Promponas, Antonis Kirmizis
BMC Biol. 2016; 14: 106. Published online 2016 Dec 7. doi: 10.1186/s12915-016-0325-7
PMCID:
PMC5142380
AbstractArticlePDF–1.2M
10.
Target selection by natural and redesigned PUF proteins
Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens
Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112
PMCID:
PMC4703012
AbstractArticlePDF–1.3M
11.
A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes
Anders Bergström, Jared T. Simpson, Francisco Salinas, Benjamin Barré, Leopold Parts, Amin Zia, Alex N. Nguyen Ba, Alan M. Moses, Edward J. Louis, Ville Mustonen, Jonas Warringer, Richard Durbin, Gianni Liti
Mol Biol Evol. 2014 Apr; 31(4): 872–888. Published online 2014 Jan 14. doi: 10.1093/molbev/msu037
PMCID:
PMC3969562
AbstractArticlePDF–887K
12.
Oxidative Stress and Replication-Independent DNA Breakage Induced by Arsenic in Saccharomyces cerevisiae
Ireneusz Litwin, Tomasz Bocer, Dorota Dziadkowiec, Robert Wysocki
PLoS Genet. 2013 Jul; 9(7): e1003640. Published online 2013 Jul 25. doi: 10.1371/journal.pgen.1003640
PMCID:
PMC3723488
AbstractArticlePDF–6.6M
13.
Saccharomyces cerevisiae Genetics Predicts Candidate Therapeutic Genetic Interactions at the Mammalian Replication Fork
Derek M. van Pel, Peter C. Stirling, Sean W. Minaker, Payal Sipahimalani, Philip Hieter
G3 (Bethesda) 2013 Feb; 3(2): 273–282. Published online 2013 Feb 1. doi: 10.1534/g3.112.004754
PMCID:
PMC3564987
AbstractArticlePDF–2.3M
14.
Novel Channel Enzyme Fusion Proteins Confer Arsenate Resistance
Binghua Wu, Jie Song, Eric Beitz
J Biol Chem. 2010 Dec 17; 285(51): 40081–40087. Published online 2010 Oct 14. doi: 10.1074/jbc.M110.184457
PMCID:
PMC3000990
AbstractArticlePDF–1.5M
15.
A Vacuolar Arsenite Transporter Necessary for Arsenic Tolerance in the Arsenic Hyperaccumulating Fern Pteris vittata Is Missing in Flowering Plants
Emily Indriolo, GunNam Na, Danielle Ellis, David E. Salt, Jo Ann Banks
Plant Cell. 2010 Jun; 22(6): 2045–2057. Published online 2010 Jun 8. doi: 10.1105/tpc.109.069773
PMCID:
PMC2910956
AbstractArticlePDF–853K
16.
Mitogen-Activated Protein Kinase Hog1 Mediates Adaptation to G1 Checkpoint Arrest during Arsenite and Hyperosmotic Stress
Iwona Migdal, Yulia Ilina, Markus J. Tamás, Robert Wysocki
Eukaryot Cell. 2008 Aug; 7(8): 1309–1317. Published online 2008 Jun 13. doi: 10.1128/EC.00038-08
PMCID:
PMC2519783
AbstractArticlePDF–904K
17.
The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast
Michael Thorsen, Yujun Di, Carolina Tängemo, Montserrat Morillas, Doryaneh Ahmadpour, Charlotte Van der Does, Annemarie Wagner, Erik Johansson, Johan Boman, Francesc Posas, Robert Wysocki, Markus J. Tamás
Mol Biol Cell. 2006 Oct; 17(10): 4400–4410. doi: 10.1091/mbc.E06-04-0315
PMCID:
PMC1635360
AbstractArticlePDF–1.4M
18.
Large-scale identification of yeast integral membrane protein interactions
John P. Miller, Russell S. Lo, Asa Ben-Hur, Cynthia Desmarais, Igor Stagljar, William Stafford Noble, Stanley Fields
Proc Natl Acad Sci U S A. 2005 Aug 23; 102(34): 12123–12128. Published online 2005 Aug 10. doi: 10.1073/pnas.0505482102
PMCID:
PMC1189342
AbstractArticlePDF–653K
19.
A Two-Hybrid Screen of the Yeast Proteome for Hsp90 Interactors Uncovers a Novel Hsp90 Chaperone Requirement in the Activity of a Stress-Activated Mitogen-Activated Protein Kinase, Slt2p (Mpk1p)
Stefan H. Millson, Andrew W. Truman, Victoria King, Chrisostomos Prodromou, Laurence H. Pearl, Peter W. Piper
Eukaryot Cell. 2005 May; 4(5): 849–860. doi: 10.1128/EC.4.5.849-860.2005
PMCID:
PMC1140089
AbstractArticlePDF–322K
20.
Integrating phenotypic and expression profiles to map arsenic-response networks
Astrid C Haugen, Ryan Kelley, Jennifer B Collins, Charles J Tucker, Changchun Deng, Cynthia A Afshari, J Martin Brown, Trey Ideker, Bennett Van Houten
Genome Biol. 2004; 5(12): R95. Published online 2004 Nov 29. doi: 10.1186/gb-2004-5-12-r95
PMCID:
PMC545798
AbstractArticlePDF–821K

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