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Items: 1 to 20 of 23

1.
Impaired OTUD7A-dependent Ankyrin regulation mediates neuronal dysfunction in mouse and human models of the 15q13.3 microdeletion syndrome
Brianna K. Unda, Leon Chalil, Sehyoun Yoon, Savannah Kilpatrick, Courtney Irwin, Sansi Xing, Nadeem Murtaza, Anran Cheng, Chad Brown, Alexandria Afonso, Elizabeth McCready, Gabriel M. Ronen, Jennifer Howe, Aurélie Caye-Eude, Alain Verloes, Brad W. Doble, Laurence Faivre, Antonio Vitobello, Stephen W. Scherer, Yu Lu, Peter Penzes, Karun K. Singh
Mol Psychiatry. 2023; 28(4): 1747–1769. Published online 2023 Jan 6. doi: 10.1038/s41380-022-01937-5
PMCID:
PMC10208958
AbstractArticlePDF–7.0M
2.
The cell adhesion molecule Sdk1 shapes assembly of a retinal circuit that detects localized edges
Pierre-Luc Rochon, Catherine Theriault, Aline Giselle Rangel Olguin, Arjun Krishnaswamy
eLife. 2021; 10: e70870. Published online 2021 Sep 21. doi: 10.7554/eLife.70870
PMCID:
PMC8514235
AbstractArticlePDF–7.9M
3.
The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas
Quanxin Wang, Song-Lin Ding, Yang Li, Josh Royall, David Feng, Phil Lesnar, Nile Graddis, Maitham Naeemi, Benjamin Facer, Anh Ho, Tim Dolbeare, Brandon Blanchard, Nick Dee, Wayne Wakeman, Karla E. Hirokawa, Aaron Szafer, Susan M. Sunkin, Seung Wook Oh, Amy Bernard, John W. Phillips, Michael Hawrylycz, Christof Koch, Hongkui Zeng, Julie A. Harris, Lydia Ng
Cell. Author manuscript; available in PMC 2021 May 26.
Published in final edited form as: Cell. 2020 May 14; 181(4): 936–953.e20. Published online 2020 May 7. doi: 10.1016/j.cell.2020.04.007
PMCID:
PMC8152789
AbstractArticlePDF–3.0M
4.
Expression and Roles of the Immunoglobulin Superfamily Recognition Molecule Sidekick1 in Mouse Retina
Masahito Yamagata, Joshua R. Sanes
Front Mol Neurosci. 2018; 11: 485. Published online 2019 Jan 9. doi: 10.3389/fnmol.2018.00485
PMCID:
PMC6333872
AbstractArticlePDF–15M
5.
Architecture of cell–cell adhesion mediated by sidekicks
Hua Tang, Haishuang Chang, Yue Dong, Luqiang Guo, Xiangyi Shi, Yichun Wu, Ying Huang, Yongning He
Proc Natl Acad Sci U S A. 2018 Sep 11; 115(37): 9246–9251. Published online 2018 Aug 27. doi: 10.1073/pnas.1801810115
PMCID:
PMC6140505
AbstractArticlePDF–1.4M
6.
Reporter–nanobody fusions (RANbodies) as versatile, small, sensitive immunohistochemical reagents
Masahito Yamagata, Joshua R. Sanes
Proc Natl Acad Sci U S A. 2018 Feb 27; 115(9): 2126–2131. Published online 2018 Feb 13. doi: 10.1073/pnas.1722491115
PMCID:
PMC5834735
AbstractArticlePDF–1.8M
7.
A dual-strategy expression screen for candidate connectivity labels in the developing thalamus
Olivia Bibollet-Bahena, Tatsuya Okafuji, Karsten Hokamp, Guy Tear, Kevin J. Mitchell
PLoS One. 2017; 12(5): e0177977. Published online 2017 May 30. doi: 10.1371/journal.pone.0177977
PMCID:
PMC5448750
AbstractArticlePDF–113M
8.
Diverse Central Projection Patterns of Retinal Ganglion Cells
Emily Martersteck, Karla E. Hirokawa, Mariah Evarts, Amy Bernard, Xin Duan, Yang Li, Lydia Ng, Seung W. Oh, Benjamin Ouellette, Joshua J. Royall, Michelle Stoecklin, Quanxin Wang, Hongkui Zeng, Joshua R. Sanes, Julie A. Harris
Cell Rep. Author manuscript; available in PMC 2017 Mar 18.
Published in final edited form as: Cell Rep. 2017 Feb 21; 18(8): 2058–2072. doi: 10.1016/j.celrep.2017.01.075
PMCID:
PMC5357325
AbstractArticlePDF–3.3M
9.
Molecular basis of sidekick-mediated cell-cell adhesion and specificity
Kerry M Goodman, Masahito Yamagata, Xiangshu Jin, Seetha Mannepalli, Phinikoula S Katsamba, Göran Ahlsén, Alina P Sergeeva, Barry Honig, Joshua R Sanes, Lawrence Shapiro
eLife. 2016; 5: e19058. Published online 2016 Sep 19. doi: 10.7554/eLife.19058
PMCID:
PMC5045292
AbstractArticlePDF–4.6M
10.
An extracellular biochemical screen reveals that FLRTs and Unc5s mediate neuronal subtype recognition in the retina
Jasper J Visser, Yolanda Cheng, Steven C Perry, Andrew Benjamin Chastain, Bayan Parsa, Shatha S Masri, Thomas A Ray, Jeremy N Kay, Woj M Wojtowicz
eLife. 2015; 4: e08149. Published online 2015 Dec 2. doi: 10.7554/eLife.08149
PMCID:
PMC4737655
AbstractArticlePDF–4.2M
11.
Genetic Method for Labeling Electrically Coupled Cells: Application to Retina
Mu Qiao, Joshua R. Sanes
Front Mol Neurosci. 2015; 8: 81. Published online 2016 Jan 7. doi: 10.3389/fnmol.2015.00081
PMCID:
PMC4703850
AbstractArticlePDF–7.6M
12.
Spatiotemporal regulation of GLI target genes in the mammalian limb bud
Jordan P. Lewandowski, Fang Du, Shilu Zhang, Marian B. Powell, Kristin N. Falkenstein, Hongkai Ji, Steven A. Vokes
Dev Biol. Author manuscript; available in PMC 2016 Oct 1.
Published in final edited form as: Dev Biol. 2015 Oct 1; 406(1): 92–103. Published online 2015 Jul 31. doi: 10.1016/j.ydbio.2015.07.022
PMCID:
PMC4587286
AbstractArticlePDF–2.0M
13.
SIDEKICK 2 DIRECTS FORMATION OF A RETINAL CIRCUIT THAT DETECTS DIFFERENTIAL MOTION
Arjun Krishnaswamy, Masahito Yamagata, Xin Duan, Y. Kate Hong, Joshua R. Sanes
Nature. Author manuscript; available in PMC 2016 Feb 27.
Published in final edited form as: Nature. 2015 Aug 27; 524(7566): 466–470. Published online 2015 Aug 19. doi: 10.1038/nature14682
PMCID:
PMC4552609
AbstractArticlePDF–2.7M
14.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
15.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
16.
Identification of genes expressed preferentially in the developing peripheral margin of the optic cup
Jeffrey M. Trimarchi, Seo-Hee Cho, Constance L. Cepko
Dev Dyn. Author manuscript; available in PMC 2010 Aug 5.
Published in final edited form as: Dev Dyn. 2009 Sep; 238(9): 2327–2329. doi: 10.1002/dvdy.21973
PMCID:
PMC2916742
AbstractArticlePDF–8.5M
17.
Synaptic Localization and Function of Sidekick Recognition Molecules Require MAGI Scaffolding Proteins
Masahito Yamagata, Joshua R. Sanes
J Neurosci. 2010 Mar 10; 30(10): 3579–3588. doi: 10.1523/JNEUROSCI.6319-09.2010
PMCID:
PMC2863080
AbstractArticlePDF–1.8M
18.
PlexinA1 signaling directs sensory axon segregation in the developing spinal cord: a role for proprioceptive axon exclusion in cutaneous afferent organization
Yutaka Yoshida, Barbara Han, Monica Mendelsohn, Thomas M. Jessell
Neuron. Author manuscript; available in PMC 2007 Dec 7.
Published in final edited form as: Neuron. 2006 Dec 7; 52(5): 775–788. doi: 10.1016/j.neuron.2006.10.032
PMCID:
PMC1847564
AbstractArticlePDF–6.8M
19.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
20.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M

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