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Select item 108762121.

Organelle proteomic profiling reveals lysosomal heterogeneity in association with longevity

Yong Yu, Shihong M Gao, Youchen Guan, Pei-Wen Hu, Qinghao Zhang, Jiaming Liu, Bentian Jing, Qian Zhao, David M Sabatini, Monther Abu-Remaileh, Sung Yun Jung, Meng C Wang

eLife. 2024; 13: e85214. Published online 2024 Jan 19. doi: 10.7554/eLife.85214

PMCID:: PMC10876212

Article PDF–5.9M

Select item 106917502.

Sensitized piRNA reporter identifies multiple RNA processing factors involved in piRNA-mediated gene silencing

Jordan S Brown, Donglei Zhang, Olivia Gaylord, Wenjun Chen, Heng-Chi Lee

Genetics. 2023 Aug; 224(4): iyad095. Published online 2023 May 20. doi: 10.1093/genetics/iyad095

PMCID:: PMC10691750

Article PDF–2.4M

Select item 106176263.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Article

Select item 105208894.

AKIR-1 regulates proteasome subcellular function in Caenorhabditis elegans

Johanna Pispa, Elisa Mikkonen, Leena Arpalahti, Congyu Jin, Carmen Martínez-Fernández, Julián Cerón, Carina I. Holmberg

iScience. 2023 Oct 20; 26(10): 107886. Published online 2023 Sep 11. doi: 10.1016/j.isci.2023.107886

PMCID:: PMC10520889

Article PDF–3.9M

Select item 101746855.

Multiple antagonist calcium-dependent mechanisms control CaM kinase-1 subcellular localization in a C. elegans thermal nociceptor

Domenica Ippolito, Dominique A Glauser

eLife. 2023; 12: e85260. Published online 2023 May 11. doi: 10.7554/eLife.85260

PMCID:: PMC10174685

Article PDF–1.7M

Select item 94378486.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Article PDF–2.0M

Select item 86359767.

Ca²⁺/CaM binding to CaMKI promotes IMA-3 importin binding and nuclear translocation in sensory neurons to control behavioral adaptation

Domenica Ippolito, Saurabh Thapliyal, Dominique A Glauser

eLife. 2021; 10: e71443. Published online 2021 Nov 12. doi: 10.7554/eLife.71443

PMCID:: PMC8635976

Article PDF–3.2M

Select item 85017798.

The nuclear ubiquitin ligase adaptor SPOP is a conserved regulator of C9orf72 dipeptide toxicity

Carley Snoznik, Valentina Medvedeva, Jelena Mojsilovic-Petrovic, Paige Rudich, James Oosten, Robert G. Kalb, Todd Lamitina

Proc Natl Acad Sci U S A. 2021 Oct 5; 118(40): e2104664118. Published online 2021 Sep 30. doi: 10.1073/pnas.2104664118

PMCID:: PMC8501779

Article PDF–1.5M

Select item 84467939.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Article PDF–1.6M

Select item 833118310.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Article PDF–8.5M

Select item 799517611.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Article PDF–1.0M

Select item 682736812.

Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules

Elisabeth A. Marnik, J. Heath Fuqua, Catherine S. Sharp, Jesse D. Rochester, Emily L. Xu, Sarah E. Holbrook, Dustin L. Updike

Genetics. 2019 Nov; 213(3): 923–939. Published online 2019 Sep 10. doi: 10.1534/genetics.119.302670

PMCID:: PMC6827368

Article PDF–4.0M

Select item 682614513.

The conserved histone chaperone LIN‐53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans

Stefanie Müthel, Bora Uyar, Mei He, Anne Krause, Burcu Vitrinel, Selman Bulut, Djordje Vasiljevic, Iris Marchal, Stefan Kempa, Altuna Akalin, Baris Tursun

Aging Cell. 2019 Dec; 18(6): e13012. Published online 2019 Aug 9. doi: 10.1111/acel.13012

PMCID:: PMC6826145

Article PDF–3.0M

Select item 668505814.

Functional Dissection of C. elegans bZip-Protein CEBP-1 Reveals Novel Structural Motifs Required for Axon Regeneration and Nuclear Import

Rose Aria Malinow, Phoenix Ying, Thijs Koorman, Mike Boxem, Yishi Jin, Kyung Won Kim

Front Cell Neurosci. 2019; 13: 348. Published online 2019 Jul 31. doi: 10.3389/fncel.2019.00348

PMCID:: PMC6685058

Article PDF–3.7M

Select item 630629815.

Size scaling of nucleolus in Caenorhabditis elegans embryos

Tian-Hsiang Ma, Po-Hsiang Chen, Bertrand Chin-Ming Tan, Szecheng J. Lo

Biomed J. 2018 Oct; 41(5): 333–336. Published online 2018 Nov 6. doi: 10.1016/j.bj.2018.07.003

PMCID:: PMC6306298

Article PDF–648K

Select item 621659016.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Article PDF–1.4M

Select item 494261217.

The RNA-binding protein repertoire of Arabidopsis thaliana

Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring

Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766

PMCID:: PMC4942612

Article PDF–1.2M

Select item 485068718.

A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes

Olivier Zugasti, Nishant Thakur, Jérôme Belougne, Barbara Squiban, C. Léopold Kurz, Julien Soulé, Shizue Omi, Laurent Tichit, Nathalie Pujol, Jonathan J. Ewbank

BMC Biol. 2016; 14: 35. Published online 2016 Apr 29. doi: 10.1186/s12915-016-0256-3