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Select item 109424671.

Mitochondrial Raf1 Regulates Glutamine Catabolism

Ronald L. Shanderson, Ian D. Ferguson, Zurab Siprashvili, Luca Ducoli, Albert M. Li, Weili Miao, Suhas Srinivasan, Mary Grace Velasco, Yang Li, Jiangbin Ye, Paul A. Khavari

Version 1. bioRxiv. Preprint. 2024 Mar 9. doi: 10.1101/2024.03.08.581297

PMCID:: PMC10942467

Abstract Article PDF–6.5M

Select item 99806762.

CircDHRS3 inhibits prostate cancer cell proliferation and metastasis through the circDHRS3/miR-421/MEIS2 axis

Xiyu Dai, Xinan Chen, Wensun Chen, Yuxi Ou, Yiling Chen, Siqi Wu, Quan Zhou, Chen Yang, Limin Zhang, Haowen Jiang

Epigenetics. 2023; 18(1): 2178802. Published online 2023 Feb 25. doi: 10.1080/15592294.2023.2178802

PMCID:: PMC9980676

Abstract Article PDF–4.5M

Select item 93383133.

HSF1 phosphorylation establishes an active chromatin state via the TRRAP–TIP60 complex and promotes tumorigenesis

Mitsuaki Fujimoto, Ryosuke Takii, Masaki Matsumoto, Mariko Okada, Keiich I. Nakayama, Ryuichiro Nakato, Katsunori Fujiki, Katsuhiko Shirahige, Akira Nakai

Nat Commun. 2022; 13: 4355. Published online 2022 Jul 29. doi: 10.1038/s41467-022-32034-4

PMCID:: PMC9338313

Abstract Article PDF–2.8M

Select item 91197364.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 81650305.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 80744166.

Inhibition of retinoic acid receptor α phosphorylation represses the progression of triple-negative breast cancer via transactivating miR-3074-5p to target DHRS3

Siyue Lou, Hang Gao, Huanwu Hong, Zhihui Zhu, Huajun Zhao

J Exp Clin Cancer Res. 2021; 40: 141. Published online 2021 Apr 26. doi: 10.1186/s13046-021-01941-7

PMCID:: PMC8074416

Abstract Article PDF–8.8M

Select item 59989827.

Retinoic acid signaling promotes the cytoskeletal rearrangement of embryonic epicardial cells

Suya Wang, Jianshi Yu, Jace W. Jones, Keely Pierzchalski, Maureen A. Kane, Paul A. Trainor, José Xavier-Neto, Alexander R. Moise

FASEB J. 2018 Jul; 32(7): 3765–3781. Published online 2018 Feb 15. doi: 10.1096/fj.201701038R

PMCID:: PMC5998982

Abstract Article

Select item 59478608.

Hippo signaling plays an essential role in cell state transitions during cardiac fibroblast development

Yang Xiao, Matthew C. Hill, Min Zhang, Thomas J. Martin, Yuka Morikawa, Suya Wang, Alexander R. Moise, Joshua D. Wythe, James F. Martin

Dev Cell. Author manuscript; available in PMC 2019 Apr 23.

Published in final edited form as: Dev Cell. 2018 Apr 23; 45(2): 153–169.e6. doi: 10.1016/j.devcel.2018.03.019

PMCID:: PMC5947860

Abstract Article PDF–2.5M

Select item 55316119.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 549522510.

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing

Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown

Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114

PMCID:: PMC5495225

Abstract Article PDF–1.3M

Select item 539258011.

The antagonistically bifunctional retinoid oxidoreductase complex is required for maintenance of all-trans-retinoic acid homeostasis

Olga V. Belyaeva, Mark K. Adams, Lizhi Wu, Natalia Y. Kedishvili

J Biol Chem. 2017 Apr 7; 292(14): 5884–5897. Published online 2017 Feb 22. doi: 10.1074/jbc.M117.776914

PMCID:: PMC5392580

Abstract Article PDF–2.4M

Select item 403153812.

The Retinaldehyde Reductase Activity of DHRS3 Is Reciprocally Activated by Retinol Dehydrogenase 10 to Control Retinoid Homeostasis

Mark K. Adams, Olga V. Belyaeva, Lizhi Wu, Natalia Y. Kedishvili

J Biol Chem. 2014 May 23; 289(21): 14868–14880. Published online 2014 Apr 14. doi: 10.1074/jbc.M114.552257

PMCID:: PMC4031538

Abstract Article PDF–2.1M

Select item 383478813.

The retinaldehyde reductase DHRS3 is essential for preventing the formation of excess retinoic acid during embryonic development

Sara E. Billings, Keely Pierzchalski, Naomi E. Butler Tjaden, Xiao-Yan Pang, Paul A. Trainor, Maureen A. Kane, Alexander R. Moise

FASEB J. 2013 Dec; 27(12): 4877–4889. doi: 10.1096/fj.13-227967

PMCID:: PMC3834788

Abstract Article

Select item 317805914.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 315107815.

p53-inducible DHRS3 Is an Endoplasmic Reticulum Protein Associated with Lipid Droplet Accumulation

Chad Deisenroth, Yoko Itahana, Laura Tollini, Aiwen Jin, Yanping Zhang

J Biol Chem. 2011 Aug 12; 286(32): 28343–28356. Published online 2011 Jun 9. doi: 10.1074/jbc.M111.254227

PMCID:: PMC3151078

Abstract Article PDF–7.3M

Select item 289674416.

The SDR (Short-Chain Dehydrogenase/Reductase and Related Enzymes) Nomenclature Initiative

Bengt Persson, James E. Bray, Elspeth Bruford, Stephen L. Dellaporta, Angelo D. Favia, Roser Gonzalez Duarte, Hans Jörnvall, Yvonne Kallberg, Kathryn L. Kavanagh, Natalia Kedishvili, Michael Kisiela, Edmund Maser, Rebekka Mindnich, Sandra Orchard, Trevor M. Penning, Janet M. Thornton, Jerzy Adamski, Udo Oppermann

Chem Biol Interact. Author manuscript; available in PMC 2010 Jul 5.

Published in final edited form as: Chem Biol Interact. 2009 Mar 16; 178(1-3): 94–98. Published online 2008 Nov 5. doi: 10.1016/j.cbi.2008.10.040

PMCID:: PMC2896744

Abstract Article PDF–57K

Select item 289646417.

Personalized Smoking Cessation: Interactions between Nicotine Dose, Dependence and Quit-Success Genotype Score

Jed E Rose, Frédérique M Behm, Tomas Drgon, Catherine Johnson, George R Uhl

Mol Med. 2010 Jul-Aug; 16(7-8): 247–253. Published online 2010 Mar 17. doi: 10.2119/molmed.2009.00159

Correction in:: Mol Med. 2012; 18(1): 729.

PMCID:: PMC2896464

Abstract Article PDF–2.4M

Select item 274230218.

Gene Expression Profiling of Papillary Thyroid Carcinoma Identifies Transcripts Correlated with BRAF Mutational Status and Lymph Node Metastasis

Gisele Oler, Cléber P. Camacho, Flávio C. Hojaij, Pedro Michaluart, Jr., Gregory J. Riggins, Janete M. Cerutti

Clin Cancer Res. Author manuscript; available in PMC 2009 Sep 11.

Published in final edited form as: Clin Cancer Res. 2008 Aug 1; 14(15): 4735–4742. doi: 10.1158/1078-0432.CCR-07-4372

PMCID:: PMC2742302

Abstract Article PDF–2.3M

Select item 268304719.

Ubiquitin-mediated proteolysis of HuR by heat shock

Kotb Abdelmohsen, Subramanya Srikantan, Xiaoling Yang, Ashish Lal, Hyeon Ho Kim, Yuki Kuwano, Stefanie Galban, Kevin G Becker, Davida Kamara, Rafael de Cabo, Myriam Gorospe

EMBO J. 2009 May 6; 28(9): 1271–1282. Published online 2009 Mar 26. doi: 10.1038/emboj.2009.67

PMCID:: PMC2683047

Abstract Article PDF–1.4M

Select item 180207720.

Mapping of transcription start sites of human retina expressed genes

Valeria Roni, Ronald Carpio, Bernd Wissinger

BMC Genomics. 2007; 8: 42. Published online 2007 Feb 7. doi: 10.1186/1471-2164-8-42

PMCID:: PMC1802077

Abstract Article PDF–578K

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