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Items: 1 to 20 of 50

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
3.
Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site
Rosemary A Bayne, Uma Jayachandran, Aleksandra Kasprowicz, Stefan Bresson, David Tollervey, Edward W J Wallace, Atlanta G Cook
Nucleic Acids Res. 2022 Mar 21; 50(5): 2923–2937. Published online 2021 Jul 24. doi: 10.1093/nar/gkab615
PMCID:
PMC8934651
AbstractArticlePDF–4.4M
4.
Blocking phosphatidylglycerol degradation in yeast defective in cardiolipin remodeling results in a new model of the Barth syndrome cellular phenotype
Paulína Káňovičová, Petra Čermáková, Dominika Kubalová, Lenka Bábelová, Petra Veselá, Martin Valachovič, Jakub Zahumenský, Anton Horváth, Jan Malínský, Mária Balážová
J Biol Chem. 2022 Jan; 298(1): 101462. Published online 2021 Dec 2. doi: 10.1016/j.jbc.2021.101462
PMCID:
PMC8728584
AbstractArticlePDF–2.7M
5.
Assembly of the complexes of oxidative phosphorylation triggers the remodeling of cardiolipin
Yang Xu, Murari Anjaneyulu, Alec Donelian, Wenxi Yu, Miriam L. Greenberg, Mindong Ren, Edward Owusu-Ansah, Michael Schlame
Proc Natl Acad Sci U S A. 2019 Jun 4; 116(23): 11235–11240. Published online 2019 May 20. doi: 10.1073/pnas.1900890116
PMCID:
PMC6561273
AbstractArticlePDF–1.0M
6.
Ethanolamine ameliorates mitochondrial dysfunction in cardiolipin-deficient yeast cells
Writoban Basu Ball, Charli D. Baker, John K. Neff, Gabriel L. Apfel, Kim A. Lagerborg, Gašper Žun, Uroš Petrovič, Mohit Jain, Vishal M. Gohil
J Biol Chem. 2018 Jul 13; 293(28): 10870–10883. Published online 2018 Jun 4. doi: 10.1074/jbc.RA118.004014
PMCID:
PMC6052229
AbstractArticlePDF–2.2M
7.
Decreasing cytosolic translation is beneficial to yeast and human Tafazzin-deficient cells
Maxence de Taffin de Tilques, Jean-Paul Lasserre, François Godard, Elodie Sardin, Marine Bouhier, Marina Le Guedard, Roza Kucharczyk, Patrice X. Petit, Eric Testet, Jean-Paul di Rago, Déborah Tribouillard-Tanvier
Microb Cell. 2018 May 7; 5(5): 220–232. Published online 2018 Feb 18. doi: 10.15698/mic2018.05.629
PMCID:
PMC5961916
AbstractArticlePDF–1.2M
8.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
9.
INA complex liaises the F1Fo-ATP synthase membrane motor modules
Nataliia Naumenko, Marcel Morgenstern, Robert Rucktäschel, Bettina Warscheid, Peter Rehling
Nat Commun. 2017; 8: 1237. Published online 2017 Nov 1. doi: 10.1038/s41467-017-01437-z
PMCID:
PMC5665977
AbstractArticlePDF–1.9M
10.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
11.
Architecture and dynamics of overlapped RNA regulatory networks
Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens
RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117
PMCID:
PMC5648032
AbstractArticlePDF–6.6M
12.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
13.
Lipidomics Characterization of Biosynthetic and Remodeling Pathways of Cardiolipins in Genetically and Nutritionally Manipulated Yeast Cells
Yulia Y. Tyurina, Wenjia Lou, Feng Qu, Vladimir A Tyurin, Dariush Mohammadyani, Jenney Liu, Maik Hüttemann, Michael A. Frasso, Peter Wipf, Hülya Bayir, Miriam. L. Greenberg, Valerian E. Kagan
ACS Chem Biol. Author manuscript; available in PMC 2017 Aug 31.
Published in final edited form as: ACS Chem Biol. 2017 Jan 20; 12(1): 265–281. Published online 2016 Dec 16. doi: 10.1021/acschembio.6b00995
PMCID:
PMC5578713
AbstractArticlePDF–1.4M
14.
Loss of tafazzin in yeast leads to increased oxidative stress during respiratory growth
Shuliang Chen, Quan He, Miriam L. Greenberg
Mol Microbiol. Author manuscript; available in PMC 2017 Aug 31.
Published in final edited form as: Mol Microbiol. 2008 May; 68(4): 1061–1072. doi: 10.1111/j.1365-2958.2008.06216.x
PMCID:
PMC5578708
AbstractArticlePDF–715K
15.
Overexpression of mitochondrial oxodicarboxylate carrier (ODC1) preserves oxidative phosphorylation in a yeast model of Barth syndrome
Maxence de Taffin de Tilques, Déborah Tribouillard-Tanvier, Emmanuel Tétaud, Eric Testet, Jean-Paul di Rago, Jean-Paul Lasserre
Dis Model Mech. 2017 Apr 1; 10(4): 439–450. doi: 10.1242/dmm.027540
PMCID:
PMC5399564
AbstractArticle
16.
The Basis for Acyl Specificity in the Tafazzin Reaction
Michael Schlame, Yang Xu, Mindong Ren
J Biol Chem. 2017 Mar 31; 292(13): 5499–5506. Published online 2017 Feb 15. doi: 10.1074/jbc.M116.769182
PMCID:
PMC5392692
AbstractArticlePDF–1.0M
17.
Ribosome-Associated Mba1 Escorts Cox2 from Insertion Machinery to Maturing Assembly Intermediates
Isotta Lorenzi, Silke Oeljeklaus, Christin Ronsör, Bettina Bareth, Bettina Warscheid, Peter Rehling, Sven Dennerlein
Mol Cell Biol. 2016 Nov 15; 36(22): 2782–2793. Prepublished online 2016 Aug 22. Published online 2016 Oct 28. doi: 10.1128/MCB.00361-16
PMCID:
PMC5086520
AbstractArticlePDF–2.4M
18.
Misregulation of a DDHD Domain-containing Lipase Causes Mitochondrial Dysfunction in Yeast
Pradeep Kumar Yadav, Ram Rajasekharan
J Biol Chem. 2016 Aug 26; 291(35): 18562–18581. Published online 2016 Jul 8. doi: 10.1074/jbc.M116.733378
PMCID:
PMC5000100
AbstractArticlePDF–3.4M
19.
Mechanism for Remodeling of the Acyl Chain Composition of Cardiolipin Catalyzed by Saccharomyces cerevisiae Tafazzin
Masato Abe, Yui Hasegawa, Masahide Oku, Yoshiki Sawada, Eriko Tanaka, Yasuyoshi Sakai, Hideto Miyoshi
J Biol Chem. 2016 Jul 22; 291(30): 15491–15502. Published online 2016 Jun 6. doi: 10.1074/jbc.M116.718510
PMCID:
PMC4957036
AbstractArticlePDF–1.2M
20.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M

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