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Items: 1 to 20 of 35

1.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
2.
Epigenetic regulation of white adipose tissue plasticity and energy metabolism by nucleosome binding HMGN proteins
Ravikanth Nanduri, Takashi Furusawa, Alexei Lobanov, Bing He, Carol Xie, Kimia Dadkhah, Michael C. Kelly, Oksana Gavrilova, Frank J. Gonzalez, Michael Bustin
Nat Commun. 2022; 13: 7303. Published online 2022 Nov 26. doi: 10.1038/s41467-022-34964-5
PMCID:
PMC9701217
AbstractArticlePDF–7.4M
3.
The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3
Laura Sánchez-Bellver, Andrea Férriz-Gordillo, Marc Carrillo-Pz, Laura Rabanal, Francesc R. Garcia-Gonzalo, Gemma Marfany
Int J Mol Sci. 2022 Oct; 23(20): 12527. Published online 2022 Oct 19. doi: 10.3390/ijms232012527
PMCID:
PMC9603860
AbstractArticlePDF–3.4M
4.
HMGN2 represses gene transcription via interaction with transcription factors Lef-1 and Pitx2 during amelogenesis
Steven Eliason, Dan Su, Flavia Pinho, Zhao Sun, Zichao Zhang, Xiao Li, Mason Sweat, Shankar R. Venugopalan, Bing He, Michael Bustin, Brad A. Amendt
J Biol Chem. 2022 Sep; 298(9): 102295. Published online 2022 Jul 21. doi: 10.1016/j.jbc.2022.102295
PMCID:
PMC9418915
AbstractArticlePDF–3.4M
5.
The regulatory effect of acetylation of HMGN2 and H3K27 on pyocyanin‐induced autophagy in macrophages by affecting Ulk1 transcription
Yu Du, Hongjun Guo, Lijuan Guo, Junming Miao, Hongyu Ren, Keyun Liu, Laibin Ren, Jinchen He, Xiaoying Wang, Junli Chen, Jingyu Li, Yi Wang, Ji Wang, Ning Huang
J Cell Mol Med. 2021 Aug; 25(15): 7524–7537. Published online 2021 Jul 18. doi: 10.1111/jcmm.16788
PMCID:
PMC8335688
AbstractArticlePDF–1.8M
6.
High-mobility group nucleosomal binding domain 2 protects against microcephaly by maintaining global chromatin accessibility during corticogenesis
Xue-Ling Gao, Wen-Jia Tian, Bofeng Liu, Jingyi Wu, Wei Xie, Qin Shen
J Biol Chem. 2020 Jan 10; 295(2): 468–480. Published online 2019 Nov 7. doi: 10.1074/jbc.RA119.010616
PMCID:
PMC6956539
AbstractArticlePDF–4.2M
7.
HMGN2 regulates non‐tuberculous mycobacteria survival via modulation of M1 macrophage polarization
Xinyuan Wang, Shanze Chen, Hongyu Ren, Junli Chen, Jingyu Li, Yi Wang, Yuanqi Hua, Xiaoying Wang, Ning Huang
J Cell Mol Med. 2019 Dec; 23(12): 7985–7998. Published online 2019 Oct 9. doi: 10.1111/jcmm.14599
PMCID:
PMC6850944
AbstractArticlePDF–1.9M
8.
Plasticity in the Glucagon Interactome Reveals Novel Proteins That Regulate Glucagon Secretion in α-TC1-6 Cells
Farzad Asadi, Savita Dhanvantari
Front Endocrinol (Lausanne) 2018; 9: 792. Published online 2019 Jan 18. doi: 10.3389/fendo.2018.00792
PMCID:
PMC6346685
AbstractArticlePDF–3.6M
9.
Binding of HMGN proteins to cell specific enhancers stabilizes cell identity
Bing He, Tao Deng, Iris Zhu, Takashi Furusawa, Shaofei Zhang, Wei Tang, Yuri Postnikov, Stefan Ambs, Caiyi Cherry Li, Ferenc Livak, David Landsman, Michael Bustin
Nat Commun. 2018; 9: 5240. Published online 2018 Dec 7. doi: 10.1038/s41467-018-07687-9
PMCID:
PMC6286339
AbstractArticlePDF–5.2M
10.
Interplay between H1 and HMGN epigenetically regulates OLIG1&2 expression and oligodendrocyte differentiation
Tao Deng, Yuri Postnikov, Shaofei Zhang, Lillian Garrett, Lore Becker, Ildikó Rácz, Sabine M. Hölter, Wolfgang Wurst, Helmut Fuchs, Valerie Gailus-Durner, Martin Hrabe de Angelis, Michael Bustin
Nucleic Acids Res. 2017 Apr 7; 45(6): 3031–3045. Published online 2016 Dec 6. doi: 10.1093/nar/gkw1222
PMCID:
PMC5389484
AbstractArticlePDF–6.6M
11.
HMGN proteins modulate chromatin regulatory sites and gene expression during activation of naïve B cells
Shaofei Zhang, Iris Zhu, Tao Deng, Takashi Furusawa, Mark Rochman, Melanie S. Vacchio, Remy Bosselut, Arito Yamane, Rafael Casellas, David Landsman, Michael Bustin
Nucleic Acids Res. 2016 Sep 6; 44(15): 7144–7158. Published online 2016 Apr 25. doi: 10.1093/nar/gkw323
PMCID:
PMC5009722
AbstractArticlePDF–5.7M
12.
Functional compensation among HMGN variants modulates the DNase I hypersensitive sites at enhancers
Tao Deng, Z. Iris Zhu, Shaofei Zhang, Yuri Postnikov, Di Huang, Marion Horsch, Takashi Furusawa, Johannes Beckers, Jan Rozman, Martin Klingenspor, Oana Amarie, Jochen Graw, Birgit Rathkolb, Eckhard Wolf, Thure Adler, Dirk H. Busch, Valérie Gailus-Durner, Helmut Fuchs, Martin Hrabě de Angelis, Arjan van der Velde, Lino Tessarollo, Ivan Ovcherenko, David Landsman, Michael Bustin
Genome Res. 2015 Sep; 25(9): 1295–1308. doi: 10.1101/gr.192229.115
PMCID:
PMC4561489
AbstractArticlePDF–940K
13.
A high resolution spatiotemporal atlas of gene expression of the developing mouse brain
Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones
Neuron. Author manuscript; available in PMC 2015 Jul 16.
Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033
PMCID:
PMC4319559
AbstractArticlePDF–3.0M
14.
A multi-resource data integration approach: identification of candidate genes regulating cell proliferation during neocortical development
Cynthia M. Vied, Florian Freudenberg, Yuting Wang, Alexandre A. S. F. Raposo, David Feng, Richard S. Nowakowski
Front Neurosci. 2014; 8: 257. Published online 2014 Aug 21. doi: 10.3389/fnins.2014.00257
PMCID:
PMC4139594
AbstractArticlePDF–8.4M
15.
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data
Gautier Koscielny, Gagarine Yaikhom, Vivek Iyer, Terrence F. Meehan, Hugh Morgan, Julian Atienza-Herrero, Andrew Blake, Chao-Kung Chen, Richard Easty, Armida Di Fenza, Tanja Fiegel, Mark Grifiths, Alan Horne, Natasha A. Karp, Natalja Kurbatova, Jeremy C. Mason, Peter Matthews, Darren J. Oakley, Asfand Qazi, Jack Regnart, Ahmad Retha, Luis A. Santos, Duncan J. Sneddon, Jonathan Warren, Henrik Westerberg, Robert J. Wilson, David G. Melvin, Damian Smedley, Steve D. M. Brown, Paul Flicek, William C. Skarnes, Ann-Marie Mallon, Helen Parkinson
Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D802–D809. Published online 2013 Nov 3. doi: 10.1093/nar/gkt977
PMCID:
PMC3964955
AbstractArticlePDF–5.7M
16.
Evaluation of TRAP-sequencing technology with a versatile conditional mouse model
Mike Hupe, Minerva Xueting Li, Karin Gertow Gillner, Ralf H. Adams, Jan M. Stenman
Nucleic Acids Res. 2014 Jan; 42(2): e14. Published online 2013 Oct 26. doi: 10.1093/nar/gkt995
PMCID:
PMC3902954
AbstractArticlePDF–18M
17.
A model for the molecular underpinnings of tooth defects in Axenfeld–Rieger syndrome
Xiao Li, Shankar R. Venugopalan, Huojun Cao, Flavia O. Pinho, Michael L. Paine, Malcolm L. Snead, Elena V. Semina, Brad A. Amendt
Hum Mol Genet. 2014 Jan 1; 23(1): 194–208. Published online 2013 Aug 23. doi: 10.1093/hmg/ddt411
PMCID:
PMC3857954
AbstractArticlePDF–2.1M
18.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
19.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
20.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M

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