PMC Links for GEO Profiles (Select 125323322) - PMC

Eirene Markenscoff-Papadimitriou, Fadya Binyameen, Sean Whalen, James Price, Kenneth Lim, Athena R. Ypsilanti, Rinaldo Catta-Preta, Emily Ling-Lin Pai, Xin Mu, Duan Xu, Katherine S. Pollard, Alex S. Nord, Matthew W. State, John L. Rubenstein

Cell Rep. Author manuscript; available in PMC 2022 Sep 26.

Published in final edited form as: Cell Rep. 2021 Dec 7; 37(10): 110089. doi: 10.1016/j.celrep.2021.110089

PMCID:: PMC9512081

Abstract Article PDF–2.6M

Select item 87633174.

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1–CoREST interactome during embryonic stem cell differentiation

Claire E. Barnes, David M. English, Megan Broderick, Mark O. Collins, Shaun M. Cowley

Mol Omics. 2022 Jan 17; 18(1): 31–44. Published online 2021 Oct 14. doi: 10.1039/d1mo00236h

PMCID:: PMC8763317

Abstract Article

Select item 87286015.

POGZ promotes homology‐directed DNA repair in an HP1‐dependent manner

John Heath, Estelle Simo Cheyou, Steven Findlay, Vincent M Luo, Edgar Pinedo Carpio, Jeesan Lee, Billel Djerir, Xiaoru Chen, Théo Morin, Benjamin Lebeau, Martin Karam, Halil Bagci, Damien Grapton, Josie Ursini‐Siegel, Jean‐Francois Côté, Michael Witcher, Stéphane Richard, Alexandre Maréchal, Alexandre Orthwein

EMBO Rep. 2022 Jan 5; 23(1): e51041. Published online 2021 Nov 10. doi: 10.15252/embr.202051041

PMCID:: PMC8728601

Abstract Article PDF–3.2M

Select item 76829926.

Altered hippocampal-prefrontal communication during anxiety-related avoidance in mice deficient for the autism-associated gene Pogz

Margaret M Cunniff, Eirene Markenscoff-Papadimitriou, Julia Ostrowski, John LR Rubenstein, Vikaas Singh Sohal

eLife. 2020; 9: e54835. Published online 2020 Nov 6. doi: 10.7554/eLife.54835

PMCID:: PMC7682992

Abstract Article PDF–1012K

Select item 76731237.

Pogz deficiency leads to transcription dysregulation and impaired cerebellar activity underlying autism-like behavior in mice

Reut Suliman-Lavie, Ben Title, Yahel Cohen, Nanako Hamada, Maayan Tal, Nitzan Tal, Galya Monderer-Rothkoff, Bjorg Gudmundsdottir, Kristbjorn O. Gudmundsson, Jonathan R. Keller, Guo-Jen Huang, Koh-ichi Nagata, Yosef Yarom, Sagiv Shifman

Nat Commun. 2020; 11: 5836. Published online 2020 Nov 17. doi: 10.1038/s41467-020-19577-0

Correction in:: Nat Commun. 2021; 12: 3874.

PMCID:: PMC7673123

Abstract Article PDF–6.1M

Select item 73019668.

POGZ Is Required for Silencing Mouse Embryonic β-like Hemoglobin and Human Fetal Hemoglobin Expression

Bjorg Gudmundsdottir, Kristbjorn O. Gudmundsson, Kimberly D. Klarmann, Satyendra K. Singh, Lei Sun, Shweta Singh, Yang Du, Vincenzo Coppola, Luke Stockwin, Nhu Nguyen, Lino Tessarollo, Leifur Thorsteinsson, Olafur E. Sigurjonsson, Sveinn Gudmundsson, Thorunn Rafnar, John F. Tisdale, Jonathan R. Keller

Cell Rep. Author manuscript; available in PMC 2020 Jun 18.

Published in final edited form as: Cell Rep. 2018 Jun 12; 23(11): 3236–3248. doi: 10.1016/j.celrep.2018.05.043

PMCID:: PMC7301966

Abstract Article PDF–2.2M

Select item 70442949.

Pathogenic POGZ mutation causes impaired cortical development and reversible autism-like phenotypes

Kensuke Matsumura, Kaoru Seiriki, Shota Okada, Masashi Nagase, Shinya Ayabe, Ikuko Yamada, Tamio Furuse, Hirotoshi Shibuya, Yuka Yasuda, Hidenaga Yamamori, Michiko Fujimoto, Kazuki Nagayasu, Kana Yamamoto, Kohei Kitagawa, Hiroki Miura, Nanaka Gotoda-Nishimura, Hisato Igarashi, Misuzu Hayashida, Masayuki Baba, Momoka Kondo, Shigeru Hasebe, Kosei Ueshima, Atsushi Kasai, Yukio Ago, Atsuko Hayata-Takano, Norihito Shintani, Tokuichi Iguchi, Makoto Sato, Shun Yamaguchi, Masaru Tamura, Shigeharu Wakana, Atsushi Yoshiki, Ayako M. Watabe, Hideyuki Okano, Kazuhiro Takuma, Ryota Hashimoto, Hitoshi Hashimoto, Takanobu Nakazawa

Nat Commun. 2020; 11: 859. Published online 2020 Feb 26. doi: 10.1038/s41467-020-14697-z

PMCID:: PMC7044294

Abstract Article PDF–8.1M

Select item 497177210.

TBR1 regulates autism risk genes in the developing neocortex

James H. Notwell, Whitney E. Heavner, Siavash Fazel Darbandi, Sol Katzman, William L. McKenna, Christian F. Ortiz-Londono, David Tastad, Matthew J. Eckler, John L.R. Rubenstein, Susan K. McConnell, Bin Chen, Gill Bejerano

Genome Res. 2016 Aug; 26(8): 1013–1022. doi: 10.1101/gr.203612.115

PMCID:: PMC4971772

Abstract Article PDF–769K

Select item 488925111.

Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression

Lori Borgal, Markus M. Rinschen, Claudia Dafinger, Valérie I. Liebrecht, Hinrich Abken, Thomas Benzing, Bernhard Schermer

Cell Cycle. 2016; 15(8): 1034–1045. Published online 2016 Feb 26. doi: 10.1080/15384101.2016.1152429

PMCID:: PMC4889251

Abstract Article PDF–1.1M

Select item 445871112.

Functional Proteomic Analysis of Repressive Histone Methyltransferase Complexes Reveals ZNF518B as a G9A Regulator

Verena K. Maier, Caitlin M. Feeney, Jordan E. Taylor, Amanda L. Creech, Jana W. Qiao, Attila Szanto, Partha P. Das, Nicholas Chevrier, Catherine Cifuentes-Rojas, Stuart H. Orkin, Steven A. Carr, Jacob D. Jaffe, Philipp Mertins, Jeannie T. Lee

Mol Cell Proteomics. 2015 Jun; 14(6): 1435–1446. Published online 2015 Feb 13. doi: 10.1074/mcp.M114.044586

PMCID:: PMC4458711

Abstract Article PDF–2.6M

Select item 431955913.

A high resolution spatiotemporal atlas of gene expression of the developing mouse brain

Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones

Neuron. Author manuscript; available in PMC 2015 Jul 16.

Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033

PMCID:: PMC4319559

Abstract Article PDF–3.0M

Select item 407349414.

The Central Role of EED in the Orchestration of Polycomb Group Complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Anastasia K. Yocum, Yong Li, Wei Chen, Xuhong Cao, Xia Jiang, Arun Dahiya, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui S. Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan

Nat Commun. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Nat Commun. 2014; 5: 3127. doi: 10.1038/ncomms4127

PMCID:: PMC4073494

Abstract Article PDF–2.1M

Select item 374619815.

A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal

Alessia Gagliardi, Nicholas P Mullin, Zi Ying Tan, Douglas Colby, Anastasia I Kousa, Florian Halbritter, Jason T Weiss, Anastasia Felker, Karel Bezstarosti, Rebecca Favaro, Jeroen Demmers, Silvia K Nicolis, Simon R Tomlinson, Raymond A Poot, Ian Chambers

EMBO J. 2013 Aug 14; 32(16): 2231–2247. Published online 2013 Jul 26. doi: 10.1038/emboj.2013.161

PMCID:: PMC3746198

Abstract Article PDF–2.9M

Select item 343984516.

A Genome-Wide Screen to Identify Transcription Factors Expressed in Pelvic Ganglia of the Lower Urinary Tract

Carrie B. Wiese, Sara Ireland, Nicole L. Fleming, Jing Yu, M. Todd Valerius, Kylie Georgas, Han Sheng Chiu, Jane Brennan, Jane Armstrong, Melissa H. Little, Andrew P. McMahon, E. Michelle Southard-Smith

Front Neurosci. 2012; 6: 130. Published online 2012 Sep 12. doi: 10.3389/fnins.2012.00130

PMCID:: PMC3439845

Abstract Article PDF–1.4M

Select item 330776217.

Functional Consequences of Necdin Nucleocytoplasmic Localization

Anat Lavi-Itzkovitz, Marianna Tcherpakov, Zehava Levy, Shalev Itzkovitz, Francoise Muscatelli, Mike Fainzilber

PLoS One. 2012; 7(3): e33786. Published online 2012 Mar 19. doi: 10.1371/journal.pone.0033786

PMCID:: PMC3307762

Abstract Article PDF–780K

Select item 317805918.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 309339519.

RAD21 Cooperates with Pluripotency Transcription Factors in the Maintenance of Embryonic Stem Cell Identity

Anja Nitzsche, Maciej Paszkowski-Rogacz, Filomena Matarese, Eva M. Janssen-Megens, Nina C. Hubner, Herbert Schulz, Ingrid de Vries, Li Ding, Norbert Huebner, Matthias Mann, Hendrik G. Stunnenberg, Frank Buchholz

PLoS One. 2011; 6(5): e19470. Published online 2011 May 12. doi: 10.1371/journal.pone.0019470

PMCID:: PMC3093395

Abstract Article PDF–1.0M

Select item 302253420.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

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