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Items: 1 to 20 of 31

1.
Functional genomic landscape of cancer-intrinsic evasion of killing by T cells
Keith A. Lawson, Cristovão M. Sousa, Xiaoyu Zhang, Eiru Kim, Rummy Akthar, Joseph J. Caumanns, Yuxi Yao, Nicholas Mikolajewicz, Catherine Ross, Kevin R. Brown, Abdelrahman Abou Zid, Zi Peng Fan, Shirley Hui, Jordan A. Krall, Donald M. Simons, Chloe J. Slater, Victor De Jesus, Lujia Tang, Richa Singh, Joshua E. Goldford, Sarah Martin, Qian Huang, Elizabeth A. Francis, Andrea Habsid, Ryan Climie, David Tieu, Jiarun Wei, Ren Li, Amy Hin Yan Tong, Michael Aregger, Katherine S. Chan, Hong Han, Xiaowei Wang, Patricia Mero, John H. Brumell, Antonio Finelli, Laurie Ailles, Gary Bader, Gromoslaw A. Smolen, Gillian A. Kingsbury, Traver Hart, Charles Kung, Jason Moffat
Nature. Author manuscript; available in PMC 2022 Apr 18.
Published in final edited form as: Nature. 2020 Oct; 586(7827): 120–126. Published online 2020 Sep 23. doi: 10.1038/s41586-020-2746-2
PMCID:
PMC9014559
AbstractArticlePDF–6.6M
2.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
3.
NF‐Y‐dependent regulation of glutamate receptor 4 expression and cell survival in cells of the oligodendrocyte lineage
Ghazala Begum, Masahiro Otsu, Usman Ahmed, Zubair Ahmed, Adam Stevens, Daniel Fulton
Glia. 2018 Sep; 66(9): 1896–1914. Published online 2018 Apr 27. doi: 10.1002/glia.23446
PMCID:
PMC6220837
AbstractArticlePDF–4.2M
4.
miR-30 Family microRNAs Regulate Myogenic Differentiation and Provide Negative Feedback on the microRNA Pathway
Martin G. Guess, Kristen K. B. Barthel, Brooke C. Harrison, Leslie A. Leinwand
PLoS One. 2015; 10(2): e0118229. Published online 2015 Feb 17. doi: 10.1371/journal.pone.0118229
PMCID:
PMC4331529
AbstractArticlePDF–2.2M
5.
A high resolution spatiotemporal atlas of gene expression of the developing mouse brain
Carol L. Thompson, Lydia Ng, Vilas Menon, Salvador Martinez, Chang-Kyu Lee, Katie Glattfelder, Susan M. Sunkin, Alex Henry, Christopher Lau, Chinh Dang, Raquel Garcia-Lopez, Almudena Martinez-Ferre, Ana Pombero, John L.R. Rubenstein, Wayne B. Wakeman, John Hohmann, Nick Dee, Andrew J. Sodt, Rob Young, Kimberly Smith, Thuc-Nghi Nguyen, Jolene Kidney, Leonard Kuan, Andreas Jeromin, Ajamete Kaykas, Jeremy Miller, Damon Page, Geri Orta, Amy Bernard, Zackery Riley, Simon Smith, Paul Wohnoutka, Mike Hawrylycz, Luis Puelles, Allan R. Jones
Neuron. Author manuscript; available in PMC 2015 Jul 16.
Published in final edited form as: Neuron. 2014 Jul 16; 83(2): 309–323. Published online 2014 Jun 19. doi: 10.1016/j.neuron.2014.05.033
PMCID:
PMC4319559
AbstractArticlePDF–3.0M
6.
Histone-fold domain protein NF-Y promotes chromatin accessibility for cell type-specific master transcription factors
Andrew J. Oldfield, Pengyi Yang, Amanda E Conway, Senthilkumar Cinghu, Johannes M. Freudenberg, Sailu Yellaboina, Raja Jothi
Mol Cell. Author manuscript; available in PMC 2015 Sep 4.
Published in final edited form as: Mol Cell. 2014 Sep 4; 55(5): 708–722. Published online 2014 Aug 14. doi: 10.1016/j.molcel.2014.07.005
PMCID:
PMC4157648
AbstractArticlePDF–1.8M
7.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
8.
Inactivation of CBF/NF-Y in postnatal liver causes hepatocellular degeneration, lipid deposition, and endoplasmic reticulum stress
Rong Luo, Sherry A. Klumpp, Milton J. Finegold, Sankar N. Maity
Sci Rep. 2011; 1: 136. Published online 2011 Nov 1. doi: 10.1038/srep00136
PMCID:
PMC3216617
AbstractArticlePDF–986K
9.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
10.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
11.
Characterization of the mouse CP27 promoter and NF-Y mediated gene regulation
Xianghong Luan, Yoshihiro Ito, Youbin Zhang, Thomas G. H. Diekwisch
Gene. Author manuscript; available in PMC 2011 Jul 15.
Published in final edited form as: Gene. 2010 Jul 15; 460(1-2): 8–19. Published online 2010 Apr 11. doi: 10.1016/j.gene.2010.03.014
PMCID:
PMC2892892
AbstractArticlePDF–2.3M
12.
Peli1 facilitates TRIF-dependent Toll-like receptor signaling and proinflammatory cytokine production
Mikyoung Chang, Wei Jin, Shao-Cong Sun
Nat Immunol. Author manuscript; available in PMC 2010 Apr 1.
Published in final edited form as: Nat Immunol. 2009 Oct; 10(10): 1089–1095. Published online 2009 Sep 6. doi: 10.1038/ni.1777
PMCID:
PMC2748822
AbstractArticlePDF–4.3M
13.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K
14.
Bone Morphogenetic Protein 2 Mediates Dentin Sialophosphoprotein Expression and Odontoblast Differentiation via NF-Y Signaling
Shuo Chen, Jelica Gluhak-Heinrich, Marcos Martinez, Tong Li, Yimin Wu, Hui-Hsiu Chuang, Lei Chen, Juan Dong, Isabel Gay, Mary MacDougall
J Biol Chem. 2008 Jul 11; 283(28): 19359–19370. doi: 10.1074/jbc.M709492200
PMCID:
PMC2443643
AbstractArticlePDF–787K
15.
In Cultured Oligodendrocytes the A/B-type hnRNP CBF-A Accompanies MBP mRNA Bound to mRNA Trafficking Sequences
Chandrasekhar S. Raju, Christian Göritz, Ylva Nord, Ola Hermanson, Carmen López-Iglesias, Neus Visa, Goncalo Castelo-Branco, Piergiorgio Percipalle
Mol Biol Cell. 2008 Jul; 19(7): 3008–3019. doi: 10.1091/mbc.E07-10-1083
PMCID:
PMC2441654
AbstractArticlePDF–2.8M
16.
High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount in situ hybridization
Toshiyuki Yoshikawa, Yulan Piao, Jinhui Zhong, Ryo Matoba, Mark G. Carter, Yuxia Wang, Ilya Goldberg, Minoru S.H. Ko
Gene Expr Patterns. Author manuscript; available in PMC 2007 Apr 10.
Published in final edited form as: Gene Expr Patterns. 2006 Jan; 6(2): 213–224. Published online 2005 Dec 1. doi: 10.1016/j.modgep.2005.06.003
PMCID:
PMC1850761
AbstractArticlePDF–1.0M
17.
Identification of the transcription factors NF-YA and NF-YB as factors A and B that bound to the promoter of the major histocompatibility complex class II gene I-A beta.
A Celada, S R McKercher, R A Maki
Biochem J. 1996 Aug 1; 317(Pt 3): 771–777. doi: 10.1042/bj3170771
PMCID:
PMC1217551
SummaryPDF–461K
18.
Subunits of the Heterotrimeric Transcription Factor NF-Y Are Imported into the Nucleus by Distinct Pathways Involving Importin β and Importin 13
Joerg Kahle, Matthias Baake, Detlef Doenecke, Werner Albig
Mol Cell Biol. 2005 Jul; 25(13): 5339–5354. doi: 10.1128/MCB.25.13.5339-5354.2005
PMCID:
PMC1157003
AbstractArticlePDF–978K
19.
Transcriptional modulation of the pre-implantation embryo-specific Rnf35 gene by the Y-box protein NF-Y/CBF
Chiu-Jung Huang, Shinn-Chih Wu, Kong-Bung Choo
Biochem J. 2005 Apr 15; 387(Pt 2): 367–375. Prepublished online 2004 Nov 1. Published online 2005 Apr 5. doi: 10.1042/BJ20041364
PMCID:
PMC1134964
AbstractArticlePDF–392K
20.
Co-evolution from yeast to mouse: cDNA cloning of the two NF-Y (CP-1/CBF) subunits.
R Hooft van Huijsduijnen, X Y Li, D Black, H Matthes, C Benoist, D Mathis
EMBO J. 1990 Oct; 9(10): 3119–3127. doi: 10.1002/j.1460-2075.1990.tb07509.x
PMCID:
PMC552040
SummaryPage BrowsePDF–2.0M

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