PMC Links for GEO Profiles (Select 12614359) - PMC

Yujiro Naito, Shohei Koyama, Kentaro Masuhiro, Takashi Hirai, Takeshi Uenami, Takako Inoue, Akio Osa, Hirotomo Machiyama, Go Watanabe, Nicolas Sax, Jordan Villa, Yumi Kinugasa-Katayama, Satoshi Nojima, Moto Yaga, Yuki Hosono, Daisuke Okuzaki, Shingo Satoh, Takeshi Tsuda, Yoshimitsu Nakanishi, Yasuhiko Suga, Takayoshi Morita, Kiyoharu Fukushima, Masayuki Nishide, Takayuki Shiroyama, Kotaro Miyake, Kota Iwahori, Haruhiko Hirata, Izumi Nagatomo, Yukihiro Yano, Motohiro Tamiya, Toru Kumagai, Norihiko Takemoto, Hidenori Inohara, Sho Yamasaki, Kazuo Yamashita, Taiki Aoshi, Esra A. Akbay, Naoki Hosen, Yasushi Shintani, Hyota Takamatsu, Masahide Mori, Yoshito Takeda, Atsushi Kumanogoh

Sci Adv. 2023 May; 9(20): eade0718. Published online 2023 May 19. doi: 10.1126/sciadv.ade0718

PMCID:: PMC10198637

Abstract Article PDF–2.1M

Select item 89539494.

Identifying Function Determining Residues in Neuroimmune Semaphorin 4A

Svetlana P. Chapoval, Mariah Lee, Aaron Lemmer, Oluwaseyi Ajayi, Xiulan Qi, Andrew F. Neuwald, Achsah D. Keegan

Int J Mol Sci. 2022 Mar; 23(6): 3024. Published online 2022 Mar 11. doi: 10.3390/ijms23063024

PMCID:: PMC8953949

Abstract Article PDF–2.8M

Select item 81650305.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 75550026.

Semaphorin4A-Plexin D1 Axis Induces Th2 and Th17 While Represses Th1 Skewing in an Autocrine Manner

Tiago Carvalheiro, Carlos Rafael-Vidal, Beatriz Malvar-Fernandez, Ana P. Lopes, Jose M. Pego-Reigosa, Timothy R. D. J. Radstake, Samuel Garcia

Int J Mol Sci. 2020 Sep; 21(18): 6965. Published online 2020 Sep 22. doi: 10.3390/ijms21186965

PMCID:: PMC7555002

Abstract Article PDF–1.3M

Select item 70689647.

Sema4A is implicated in the acceleration of Th17 cell-mediated neuroinflammation in the effector phase

Toru Koda, Akiko Namba, Makoto Kinoshita, Yuji Nakatsuji, Tomoyuki Sugimoto, Kaori Sakakibara, Satoru Tada, Mikito Shimizu, Kazuya Yamashita, Kazushiro Takata, Teruyuki Ishikura, Syo Murata, Shohei Beppu, Atsushi Kumanogoh, Hideki Mochizuki, Tatsusada Okuno

J Neuroinflammation. 2020; 17: 82. Published online 2020 Mar 13. doi: 10.1186/s12974-020-01757-w

PMCID:: PMC7068964

Abstract Article PDF–1.0M

Select item 70090208.

Semaphorin4A and H-ferritin utilize Tim-1 on human oligodendrocytes: A novel neuro-immune axis

Brian Chiou, Elisabeth Lucassen, Michael Sather, Asha Kallianpur, James Connor

Glia. Author manuscript; available in PMC 2020 Feb 10.

Published in final edited form as: Glia. 2018 Jul; 66(7): 1317–1330. Published online 2018 Feb 19. doi: 10.1002/glia.23313

PMCID:: PMC7009020

Abstract Article PDF–1.8M

Select item 67906189.

Induction of Inflammation and Fibrosis by Semaphorin 4A in Systemic Sclerosis

Tiago Carvalheiro, Alsya J. Affandi, Beatriz Malvar‐Fernández, Ilse Dullemond, Marta Cossu, Andrea Ottria, Jorre S. Mertens, Barbara Giovannone, Femke Bonte‐Mineur, Marc R. Kok, Wioleta Marut, Kris A. Reedquist, Timothy R. Radstake, Samuel García

Arthritis Rheumatol. 2019 Oct; 71(10): 1711–1722. Published online 2019 Aug 27. doi: 10.1002/art.40915

PMCID:: PMC6790618

Abstract Article PDF–1.2M

Select item 659091910.

Semaphorin 4A Stabilizes Human Regulatory T Cell Phenotype via Plexin B1

Svetlana P. Chapoval, Molly Hritzo, Xiulan Qi, Luca Tamagnone, Amit Golding, Achsah D. Keegan

Immunohorizons. Author manuscript; available in PMC 2020 Feb 1.

Published in final edited form as: Immunohorizons. 2019 Feb; 3(2): 71–87. doi: 10.4049/immunohorizons.1800026

PMCID:: PMC6590919

Abstract Article PDF–1.8M

Select item 610808311.

On variants and disease-causing mutations: Case studies of a SEMA4A variant identified in inherited blindness

Laura Bryant, Olga Lozynska, Grace Han, Jessica I.W. Morgan, Xiaowu Gai, Albert M. Maguire, Tomas Aleman, Jean Bennett

Ophthalmic Genet. Author manuscript; available in PMC 2019 Jan 1.

Published in final edited form as: Ophthalmic Genet. 2018 Jan-Feb; 39(1): 144–146. Published online 2017 Aug 14. doi: 10.1080/13816810.2017.1354384

PMCID:: PMC6108083

Article PDF–84K

Select item 582186812.

Human Semaphorin-4A drives Th2 responses by binding to receptor ILT-4

Ning Lu, Ying Li, Zhiqiang Zhang, Junji Xing, Ying Sun, Sheng Yao, Lieping Chen

Nat Commun. 2018; 9: 742. Published online 2018 Feb 21. doi: 10.1038/s41467-018-03128-9

PMCID:: PMC5821868

Abstract Article PDF–1.9M

Select item 522360013.

A reverse signaling pathway downstream of Sema4A controls cell migration via Scrib

Tianliang Sun, Lida Yang, Harmandeep Kaur, Jenny Pestel, Mario Looso, Hendrik Nolte, Cornelius Krasel, Daniel Heil, Ramesh K. Krishnan, Marie-Josée Santoni, Jean-Paul Borg, Moritz Bünemann, Stefan Offermanns, Jakub M. Swiercz, Thomas Worzfeld

J Cell Biol. 2017 Jan 2; 216(1): 199–215. doi: 10.1083/jcb.201602002

PMCID:: PMC5223600

Abstract Article PDF–2.9M

Select item 460899714.

Cell Surface Proteomic Map of HIV Infection Reveals Antagonism of Amino Acid Metabolism by Vpu and Nef

Nicholas J. Matheson, Jonathan Sumner, Kim Wals, Radu Rapiteanu, Michael P. Weekes, Raphael Vigan, Julia Weinelt, Michael Schindler, Robin Antrobus, Ana S.H. Costa, Christian Frezza, Clary B. Clish, Stuart J.D. Neil, Paul J. Lehner

Cell Host Microbe. 2015 Oct 14; 18(4): 409–423. doi: 10.1016/j.chom.2015.09.003

PMCID:: PMC4608997

Abstract Article PDF–3.8M

Select item 454911915.

Expression of Semaphorin 4A and its potential role in rheumatoid arthritis

Lin Wang, Guanhua Song, Yabing Zheng, Weiwei Tan, Jihong Pan, Yu Zhao, Xiaotian Chang

Arthritis Res Ther. 2015; 17(1): 227. Published online 2015 Aug 25. doi: 10.1186/s13075-015-0734-y

PMCID:: PMC4549119

Abstract Article PDF–3.3M

Select item 421441416.

Germline variants in the SEMA4A gene predispose to familial colorectal cancer type X

Eduard Schulz, Petra Klampfl, Stefanie Holzapfel, Andreas R. Janecke, Peter Ulz, Wilfried Renner, Karl Kashofer, Satoshi Nojima, Anita Leitner, Armin Zebisch, Albert Wölfler, Sybille Hofer, Armin Gerger, Sigurd Lax, Christine Beham-Schmid, Verena Steinke, Ellen Heitzer, Jochen B. Geigl, Christian Windpassinger, Gerald Hoefler, Michael R. Speicher, C. Richard Boland, Atsushi Kumanogoh, Heinz Sill

Nat Commun. 2014 Oct 13; 5: 5191. Published online 2014 Oct 13. doi: 10.1038/ncomms6191

PMCID:: PMC4214414

Abstract Article PDF–1.7M

Select item 356246317.

A point mutation in Semaphorin 4A associates with defective endosomal sorting and causes retinal degeneration

Satoshi Nojima, Toshihiko Toyofuku, Hiroyuki Kamao, Chie Ishigami, Jun Kaneko, Tatsusada Okuno, Hyota Takamatsu, Daisuke Ito, Sujin Kang, Tetsuya Kimura, Yuji Yoshida, Keiko Morimoto, Yohei Maeda, Atsushi Ogata, Masahito Ikawa, Eiichi Morii, Katsuyuki Aozasa, Junichi Takagi, Masayo Takahashi, Atsushi Kumanogoh

Nat Commun. 2013 Jan 29; 4: 1406. Published online 2013 Jan 29. doi: 10.1038/ncomms2420

PMCID:: PMC3562463

Abstract Article PDF–3.0M

Select item 326170818.

Toward an understanding of the protein interaction network of the human liver

Jian Wang, Keke Huo, Lixin Ma, Liujun Tang, Dong Li, Xiaobi Huang, Yanzhi Yuan, Chunhua Li, Wei Wang, Wei Guan, Hui Chen, Chaozhi Jin, Junchen Wei, Wanqiao Zhang, Yongsheng Yang, Qiongming Liu, Ying Zhou, Cuili Zhang, Zhihao Wu, Wangxiang Xu, Ying Zhang, Tao Liu, Donghui Yu, Yaping Zhang, Liang Chen, Dewu Zhu, Xing Zhong, Lixin Kang, Xiang Gan, Xiaolan Yu, Qi Ma, Jing Yan, Li Zhou, Zhongyang Liu, Yunping Zhu, Tao Zhou, Fuchu He, Xiaoming Yang

Mol Syst Biol. 2011; 7: 536. Published online 2011 Oct 11. doi: 10.1038/msb.2011.67

Correction in:: Mol Syst Biol. 2017 Dec; 13(12): 965.

PMCID:: PMC3261708

Abstract Article PDF–2.0M

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 256322420.

Identification of novel mutations in the SEMA4A gene associated with retinal degenerative diseases

A Abid, M Ismail, S Q Mehdi

J Med Genet. 2006 Apr; 43(4): 378–381. Published online 2005 Sep 30. doi: 10.1136/jmg.2005.035055

PMCID:: PMC2563224

Abstract Article PDF–191K

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