PMC Links for GEO Profiles (Select 12643949) - PMC

Select item 88732141.

RIOX1-demethylated cGAS regulates ionizing radiation-elicited DNA repair

Yanxuan Xiao, Jingyi Li, Xiaoyu Liao, Yumin He, Tao He, Cuiping Yang, Lu Jiang, So Mi Jeon, Jong-Ho Lee, Yongbin Chen, Rui Liu, Qianming Chen

Bone Res. 2022; 10: 19. Published online 2022 Feb 24. doi: 10.1038/s41413-022-00194-0

PMCID:: PMC8873214

Abstract Article PDF–2.4M

Select item 76089562.

Mechanisms Regulating Muscle Protein Synthesis in CKD

Liping Zhang, Qin Chen, Zihong Chen, Ying Wang, Jorge L. Gamboa, Talat Alp Ikizler, Giacomo Garibotto, William E. Mitch

J Am Soc Nephrol. 2020 Nov; 31(11): 2573–2587. Published online 2020 Aug 6. doi: 10.1681/ASN.2019121277

Correction in:: J Am Soc Nephrol. 2021 Feb; 32(2): 521.

PMCID:: PMC7608956

Abstract Article

Select item 53812263.

Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function

Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang

Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626

PMCID:: PMC5381226

Abstract Article PDF–1.4M

Select item 47803224.

Mesenchymal Deletion of Histone Demethylase NO66 in Mice Promotes Bone Formation

Qin Chen, Krishna Sinha, Jian Min Deng, Hideyo Yasuda, Ralf Krahe, Richard R. Behringer, Benoit de Crombrugghe

J Bone Miner Res. Author manuscript; available in PMC 2016 Mar 7.

Published in final edited form as: J Bone Miner Res. 2015 Sep; 30(9): 1608–1617. Published online 2015 Jun 11. doi: 10.1002/jbmr.2494

PMCID:: PMC4780322

Abstract Article PDF–851K

Select item 44472215.

Mesenchyme-specific overexpression of nucleolar protein 66 in mice inhibits skeletal growth and bone formation

Qin Chen, Liping Zhang, Benoit de Crombrugghe, Ralf Krahe

FASEB J. 2015 Jun; 29(6): 2555–2565. Published online 2015 Mar 6. doi: 10.1096/fj.14-258970

PMCID:: PMC4447221

Abstract Article

Select item 40734946.

The Central Role of EED in the Orchestration of Polycomb Group Complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Anastasia K. Yocum, Yong Li, Wei Chen, Xuhong Cao, Xia Jiang, Arun Dahiya, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui S. Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan

Nat Commun. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Nat Commun. 2014; 5: 3127. doi: 10.1038/ncomms4127

PMCID:: PMC4073494

Abstract Article PDF–2.1M

Select item 39614977.

Osterix and NO66 histone demethylase control the chromatin architecture of Osterix target genes during osteoblast differentiation

Krishna M. Sinha, Hideyo Yasuda, Xin Zhou, Benoit deCrombrugghe

J Bone Miner Res. Author manuscript; available in PMC 2015 Apr 1.

Published in final edited form as: J Bone Miner Res. 2014 Apr; 29(4): 855–865. doi: 10.1002/jbmr.2103

PMCID:: PMC3961497

Abstract Article PDF–2.0M

Select item 37257818.

Genetic and molecular control of Osterix in skeletal formation

Krishna M. Sinha, Xin Zhou

J Cell Biochem. Author manuscript; available in PMC 2013 Jul 29.

Published in final edited form as: J Cell Biochem. 2013 May; 114(5): 975–984. doi: 10.1002/jcb.24439

PMCID:: PMC3725781

Abstract Article PDF–575K

Select item 35724109.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253411.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 278053612.

Regulation of the osteoblast-specific transcription factor Osterix by NO66, a Jumonji family histone demethylase

Krishna M Sinha, Hideyo Yasuda, Madelene M Coombes, Sharon Y R Dent, Benoit de Crombrugghe

EMBO J. 2010 Jan 6; 29(1): 68–79. Published online 2009 Nov 19. doi: 10.1038/emboj.2009.332

PMCID:: PMC2780536

Abstract Article PDF–2.0M

Select item 37927813.

NO66, a Highly Conserved Dual Location Protein in the Nucleolus and in a Special Type of Synchronously Replicating Chromatin

Jens Eilbracht, Michaela Reichenzeller, Michaela Hergt, Martina Schnölzer, Hans Heid, Michael Stöhr, Werner W. Franke, Marion S. Schmidt-Zachmann

Mol Biol Cell. 2004 Apr; 15(4): 1816–1832. doi: 10.1091/mbc.E03-08-0623

PMCID:: PMC379278

Abstract Article PDF–1.3M

Select item 31099214.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098015.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924116.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 2980017.

Database resources of the National Center for Biotechnology Information

David L. Wheeler, Deanna M. Church, Alex E. Lash, Detlef D. Leipe, Thomas L. Madden, Joan U. Pontius, Gregory D. Schuler, Lynn M. Schriml, Tatiana A. Tatusova, Lukas Wagner, Barbara A. Rapp

Nucleic Acids Res. 2001 Jan 1; 29(1): 11–16. doi: 10.1093/nar/29.1.11

PMCID:: PMC29800

Abstract Article PDF–101K

Select item 1683318.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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