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Items: 1 to 20 of 22

1.
Impaired OTUD7A-dependent Ankyrin regulation mediates neuronal dysfunction in mouse and human models of the 15q13.3 microdeletion syndrome
Brianna K. Unda, Leon Chalil, Sehyoun Yoon, Savannah Kilpatrick, Courtney Irwin, Sansi Xing, Nadeem Murtaza, Anran Cheng, Chad Brown, Alexandria Afonso, Elizabeth McCready, Gabriel M. Ronen, Jennifer Howe, Aurélie Caye-Eude, Alain Verloes, Brad W. Doble, Laurence Faivre, Antonio Vitobello, Stephen W. Scherer, Yu Lu, Peter Penzes, Karun K. Singh
Mol Psychiatry. 2023; 28(4): 1747–1769. Published online 2023 Jan 6. doi: 10.1038/s41380-022-01937-5
PMCID:
PMC10208958
AbstractArticlePDF–7.0M
2.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
3.
DOCK3 is a dosage-sensitive regulator of skeletal muscle and Duchenne muscular dystrophy-associated pathologies
Andrea L Reid, Yimin Wang, Adrienne Samani, Rylie M Hightower, Michael A Lopez, Shawn R Gilbert, Lara Ianov, David K Crossman, Louis J Dell’Italia, Douglas P Millay, Thomas van Groen, Ganesh V Halade, Matthew S Alexander
Hum Mol Genet. 2020 Sep 1; 29(17): 2855–2871. Published online 2020 Aug 7. doi: 10.1093/hmg/ddaa173
PMCID:
PMC7566544
AbstractArticlePDF–2.6M
4.
Dock3 Stimulates Axonal Outgrowth via GSK-3β-Mediated Microtubule Assembly
Kazuhiko Namekata, Chikako Harada, Xiaoli Guo, Atsuko Kimura, Daiji Kittaka, Hayaki Watanabe, Takayuki Harada
J Neurosci. 2012 Jan 4; 32(1): 264–274. doi: 10.1523/JNEUROSCI.4884-11.2012
PMCID:
PMC6621311
AbstractArticlePDF–3.1M
5.
Dock3 protects myelin in the cuprizone model for demyelination
K Namekata, A Kimura, C Harada, H Yoshida, Y Matsumoto, T Harada
Cell Death Dis. 2014 Aug; 5(8): e1395. Published online 2014 Aug 28. doi: 10.1038/cddis.2014.357
PMCID:
PMC4454328
AbstractArticlePDF–4.3M
6.
MicroRNA-486–dependent modulation of DOCK3/PTEN/AKT signaling pathways improves muscular dystrophy–associated symptoms
Matthew S. Alexander, Juan Carlos Casar, Norio Motohashi, Natássia M. Vieira, Iris Eisenberg, Jamie L. Marshall, Molly J. Gasperini, Angela Lek, Jennifer A. Myers, Elicia A. Estrella, Peter B. Kang, Frederic Shapiro, Fedik Rahimov, Genri Kawahara, Jeffrey J. Widrick, Louis M. Kunkel
J Clin Invest. 2014 Jun 2; 124(6): 2651–2667. Published online 2014 May 1. doi: 10.1172/JCI73579
PMCID:
PMC4038577
AbstractArticlePDF–4.3M
7.
Dock3 attenuates neural cell death due to NMDA neurotoxicity and oxidative stress in a mouse model of normal tension glaucoma
K Namekata, A Kimura, K Kawamura, X Guo, C Harada, K Tanaka, T Harada
Cell Death Differ. 2013 Sep; 20(9): 1250–1256. Published online 2013 Jul 12. doi: 10.1038/cdd.2013.91
PMCID:
PMC3741514
AbstractArticlePDF–1.9M
8.
Dock3 interaction with a glutamate-receptor NR2D subunit protects neurons from excitotoxicity
Ning Bai, Hideki Hayashi, Tomomi Aida, Kazuhiko Namekata, Takayuki Harada, Masayoshi Mishina, Kohichi Tanaka
Mol Brain. 2013; 6: 22. Published online 2013 May 4. doi: 10.1186/1756-6606-6-22
PMCID:
PMC3652797
AbstractArticlePDF–2.2M
9.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
CHD5, a Brain-Specific Paralog of Mi2 Chromatin Remodeling Enzymes, Regulates Expression of Neuronal Genes
Rebecca Casaday Potts, Peisu Zhang, Andrea L. Wurster, Patricia Precht, Mohamed R. Mughal, William H. Wood, III, Yonqing Zhang, Kevin G. Becker, Mark P. Mattson, Michael J. Pazin
PLoS One. 2011; 6(9): e24515. Published online 2011 Sep 13. doi: 10.1371/journal.pone.0024515
PMCID:
PMC3172237
AbstractArticlePDF–1.0M
12.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
13.
Dock3 induces axonal outgrowth by stimulating membrane recruitment of the WAVE complex
Kazuhiko Namekata, Chikako Harada, Choji Taya, Xiaoli Guo, Hideo Kimura, Luis F. Parada, Takayuki Harada
Proc Natl Acad Sci U S A. 2010 Apr 20; 107(16): 7586–7591. Published online 2010 Apr 5. doi: 10.1073/pnas.0914514107
PMCID:
PMC2867726
AbstractArticlePDF–937K
14.
Loss of Modifier of Cell Adhesion Reveals a Pathway Leading to Axonal Degeneration
Qi Chen, Charles A. Peto, G. Diane Shelton, Andrew Mizisin, Paul E. Sawchenko, David Schubert
J Neurosci. 2009 Jan 7; 29(1): 118–130. doi: 10.1523/JNEUROSCI.3985-08.2009
PMCID:
PMC2669744
AbstractArticlePDF–1.1M
15.
A novel mechanism for the regulation of amyloid precursor protein metabolism
Qi Chen, Hideo Kimura, David Schubert
J Cell Biol. 2002 Jul 8; 158(1): 79–89. doi: 10.1083/jcb.200110151
PMCID:
PMC2173011
AbstractArticlePDF–484K
16.
Presenilin Binding Protein Is Associated with Neurofibrillary Alterations in Alzheimer’s Disease and Stimulates Tau Phosphorylation
Qi Chen, Hirotaka Yoshida, David Schubert, Pamela Maher, Margaret Mallory, Eliezer Masliah
Am J Pathol. 2001 Nov; 159(5): 1597–1602. doi: 10.1016/S0002-9440(10)63005-2
PMCID:
PMC1867048
AbstractArticlePDF–471K
17.
Disruption of a novel member of a sodium/hydrogen exchanger family and DOCK3 is associated with an attention deficit hyperactivity disorder-like phenotype
M G de Silva, K Elliott, H Dahl, E Fitzpatrick, S Wilcox, M Delatycki, R Williamson, D Efron, M Lynch, S Forrest
J Med Genet. 2003 Oct; 40(10): 733–740. doi: 10.1136/jmg.40.10.733
PMCID:
PMC1735283
SummaryPDF–698K
18.
BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System
Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran
PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086
PMCID:
PMC1413568
ArticlePDF–99K
19.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
20.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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