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Items: 1 to 20 of 94

1.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
2.
A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans
Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor
Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136
PMCID:
PMC9630986
AbstractArticlePDF–2.2M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
A novel allele of SIR2 reveals a heritable intermediate state of gene silencing
Delaney Farris, Daniel S Saxton, Jasper Rine
Genetics. 2021 May; 218(1): iyab041. Published online 2021 Mar 13. doi: 10.1093/genetics/iyab041
PMCID:
PMC8128386
AbstractArticlePDF–1.4M
5.
Nucleosome Positioning Regulates the Establishment, Stability, and Inheritance of Heterochromatin in Saccharomyces cerevisiae
Daniel S. Saxton, Jasper Rine
Proc Natl Acad Sci U S A. 2020 Nov 3; 117(44): 27493–27501. Published online 2020 Oct 19. doi: 10.1073/pnas.2004111117
PMCID:
PMC7959511
AbstractArticlePDF–1.2M
6.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
7.
A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae
Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum
J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628
PMCID:
PMC7325435
AbstractArticle
8.
Yeast mismatch repair components are required for stable inheritance of gene silencing
Qian Liu, Xuefeng Zhu, Michelle Lindström, Yonghong Shi, Ju Zheng, Xinxin Hao, Claes M. Gustafsson, Beidong Liu
PLoS Genet. 2020 May; 16(5): e1008798. Published online 2020 May 29. doi: 10.1371/journal.pgen.1008798
PMCID:
PMC7286534
AbstractArticlePDF–3.5M
9.
Epigenetic memory independent of symmetric histone inheritance
Daniel S Saxton, Jasper Rine
eLife. 2019; 8: e51421. Published online 2019 Oct 15. doi: 10.7554/eLife.51421
PMCID:
PMC6850775
AbstractArticlePDF–1.5M
10.
Rpd3L Contributes to the DNA Damage Sensitivity of Saccharomyces cerevisiae Checkpoint Mutants
Belén Gómez-González, Harshil Patel, Anne Early, John F. X. Diffley
Genetics. 2019 Feb; 211(2): 503–513. Published online 2018 Dec 17. doi: 10.1534/genetics.118.301817
PMCID:
PMC6366903
AbstractArticlePDF–1.7M
11.
Histone chaperone Spt16p is required for heterochromatin mediated silencing in budding yeast
Xiaowei Yan, Jiayi Yang, Jiawei Xu, Jianxun Feng, Qing Li
Protein Cell. 2018 Jul; 9(7): 652–658. Published online 2017 Nov 14. doi: 10.1007/s13238-017-0485-4
PMCID:
PMC6019661
ArticlePDF–664K
12.
Aneuploidy as a cause of impaired chromatin silencing and mating-type specification in budding yeast
Wahid A Mulla, Chris W Seidel, Jin Zhu, Hung-Ji Tsai, Sarah E Smith, Pushpendra Singh, William D Bradford, Scott McCroskey, Anjali R Nelliat, Juliana Conkright, Allison Peak, Kathryn E Malanowski, Anoja G Perera, Rong Li
eLife. 2017; 6: e27991. Published online 2017 Aug 25. doi: 10.7554/eLife.27991
PMCID:
PMC5779231
AbstractArticlePDF–6.7M
13.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
14.
Protein Moonlighting Revealed by Noncatalytic Phenotypes of Yeast Enzymes
Adriana Espinosa-Cantú, Diana Ascencio, Selene Herrera-Basurto, Jiewei Xu, Assen Roguev, Nevan J. Krogan, Alexander DeLuna
Genetics. 2018 Jan; 208(1): 419–431. Published online 2017 Nov 10. doi: 10.1534/genetics.117.300377
PMCID:
PMC5753873
AbstractArticlePDF–1.5M
15.
Chromatin determinants impart camptothecin sensitivity
Fabio Puddu, Israel Salguero, Mareike Herzog, Nicola J Geisler, Vincenzo Costanzo, Stephen P Jackson
EMBO Rep. 2017 Jun; 18(6): 1000–1012. Published online 2017 Apr 7. doi: 10.15252/embr.201643560
PMCID:
PMC5452016
AbstractArticlePDF–2.5M
16.
Variants of the Sir4 Coiled-Coil Domain Improve Binding to Sir3 for Heterochromatin Formation in Saccharomyces cerevisiae
Anke Samel, Adam Rudner, Ann E. Ehrenhofer-Murray
G3 (Bethesda) 2017 Apr; 7(4): 1117–1126. Published online 2017 Feb 10. doi: 10.1534/g3.116.037739
PMCID:
PMC5386860
AbstractArticlePDF–1.8M
17.
Functional Metabolomics Describes the Yeast Biosynthetic Regulome
Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser
Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007
PMCID:
PMC5055083
AbstractArticlePDF–3.9M
18.
The Nuts and Bolts of Transcriptionally Silent Chromatin in Saccharomyces cerevisiae
Marc R. Gartenberg, Jeffrey S. Smith
Genetics. 2016 Aug; 203(4): 1563–1599. Published online 2016 Aug 5. doi: 10.1534/genetics.112.145243
PMCID:
PMC4981263
AbstractArticlePDF–2.4M
19.
Chromosome-Specific and Global Effects of Aneuploidy in Saccharomyces cerevisiae
Stacie E. Dodgson, Sharon Kim, Michael Costanzo, Anastasia Baryshnikova, Darcy L. Morse, Chris A. Kaiser, Charles Boone, Angelika Amon
Genetics. 2016 Apr; 202(4): 1395–1409. Published online 2016 Jan 29. doi: 10.1534/genetics.115.185660
PMCID:
PMC4905547
AbstractArticlePDF–4.0M
20.
Riches of phenotype computationally extracted from microbial colonies
Tzu-Yu Liu, Anne E. Dodson, Jonathan Terhorst, Yun S. Song, Jasper Rine
Proc Natl Acad Sci U S A. 2016 May 17; 113(20): E2822–E2831. Published online 2016 May 2. doi: 10.1073/pnas.1523295113
PMCID:
PMC4878510
AbstractArticlePDF–2.6M

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