PMC Links for GEO Profiles (Select 131145706) - PMC

Select item 108020741.

Sequential gene expression analysis of myelodysplastic syndrome transformation identifies HOXB3 and HOXB7 as the novel targets for mesenchymal cells in disease

Chunlai Yin, Yanqi Li, Cheng Zhang, Shizhu Zang, Zilong Wang, Xue Yan, Tonghui Ma, Xia Li, Weiping Li

BMC Cancer. 2024; 24: 111. Published online 2024 Jan 22. doi: 10.1186/s12885-024-11859-w

PMCID:: PMC10802074

Abstract Article PDF–8.4M

Select item 100428872.

HOXB3 drives WNT-activation associated progression in castration-resistant prostate cancer

Shimiao Zhu, Zhao Yang, Zheng Zhang, Hongli Zhang, Songyang Li, Tao Wu, Xuanrong Chen, Jianing Guo, Aixiang Wang, Hao Tian, Jianpeng Yu, Changwen Zhang, Lei Su, Zhiqun Shang, Changyi Quan, Yuanjie Niu

Cell Death Dis. 2023 Mar; 14(3): 215. Published online 2023 Mar 27. doi: 10.1038/s41419-023-05742-y

PMCID:: PMC10042887

Abstract Article PDF–5.7M

Select item 88132963.

Extracellular Vesicle-Encapsulated MicroRNA-375 from Bone Marrow-Derived Mesenchymal Stem Cells Inhibits Hepatocellular Carcinoma Progression through Regulating HOXB3-Mediated Wnt/β-Catenin Pathway

Zhaoxia Yu, Ju Liu, Qiqi Fan, Jun Yu, Xiaoting Ren, Xiaobin Wang

Anal Cell Pathol (Amst) 2022; 2022: 9302496. Published online 2022 Jan 27. doi: 10.1155/2022/9302496

PMCID:: PMC8813296

Abstract Article PDF–4.7M

Select item 81650304.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 61666825.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 58119746.

A novel miR-375-HOXB3-CDCA3/DNMT3B regulatory circuitry contributes to leukemogenesis in acute myeloid leukemia

Laixi Bi, Bin Zhou, Haiying Li, Licai He, Chunjing Wang, Zhonggai Wang, Liqing Zhu, Mengqian Chen, Shenmeng Gao

BMC Cancer. 2018; 18: 182. Published online 2018 Feb 13. doi: 10.1186/s12885-018-4097-z

PMCID:: PMC5811974

Abstract Article PDF–4.8M

Select item 46230367.

Identification of differentially methylated markers among cytogenetic risk groups of acute myeloid leukemia

Xiaoyu Qu, Jerry Davison, Liping Du, Barry Storer, Derek L Stirewalt, Shelly Heimfeld, Elihu Estey, Frederick R Appelbaum, Min Fang

Epigenetics. 2015 Jun; 10(6): 526–535. Published online 2015 May 21. doi: 10.1080/15592294.2015.1048060

PMCID:: PMC4623036

Abstract Article PDF–637K

Select item 33701008.

A genome-wide association meta-analysis identifies new childhood obesity loci

Jonathan P. Bradfield, H. Rob Taal, Nicholas J. Timpson, André Scherag, Cecile Lecoeur, Nicole M. Warrington, Elina Hypponen, Claus Holst, Beatriz Valcarcel, Elisabeth Thiering, Rany M. Salem, Fredrick R. Schumacher, Diana L. Cousminer, Patrick M.A. Sleiman, Jianhua Zhao, Robert I. Berkowitz, Karani S. Vimaleswaran, Ivonne Jarick, Craig E. Pennell, David M. Evans, Beate St. Pourcain, Diane J. Berry, Dennis O Mook-Kanamori, Albert Hofman, Fernando Rivadeinera, André G. Uitterlinden, Cornelia M. van Duijn, Ralf J.P. van der Valk, Johan C. de Jongste, Dirkje S. Postma, Dorret I. Boomsma, William J. Gauderman, Mohamed T. Hassanein, Cecilia M. Lindgren, Reedik Mägi, Colin A.G. Boreham, Charlotte E. Neville, Luis A. Moreno, Paul Elliott, Anneli Pouta, Anna-Liisa Hartikainen, Mingyao Li, Olli Raitakari, Terho Lehtimäki, Johan G. Eriksson, Aarno Palotie, Jean Dallongeville, Shikta Das, Panos Deloukas, George McMahon, Susan M. Ring, John P. Kemp, Jessica L. Buxton, Alexandra I.F. Blakemore, Mariona Bustamante, Mònica Guxens, Joel N. Hirschhorn, Matthew W. Gillman, Eskil Kreiner-Møller, Hans Bisgaard, Frank D. Gilliland, Joachim Heinrich, Eleanor Wheeler, Inês Barroso, Stephen O'Rahilly, Aline Meirhaeghe, Thorkild I.A. Sørensen, Chris Power, Lyle J. Palmer, Anke Hinney, Elisabeth Widen, I. Sadaf Farooqi, Mark I. McCarthy, Philippe Froguel, David Meyre, Johannes Hebebrand, Marjo-Riitta Jarvelin, Vincent W.V. Jaddoe, George Davey Smith, Hakon Hakonarson, Struan F.A. Grant, for the Early Growth Genetics (EGG) Consortium

Nat Genet. Author manuscript; available in PMC 2012 Jul 1.

Published in final edited form as: Nat Genet. 2012 May; 44(5): 526–531. doi: 10.1038/ng.2247

PMCID:: PMC3370100

Abstract Article PDF–247K

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 277665110.

Epigenetic Silencing of the RASSF1A Tumor Suppressor Gene through HOXB3-Mediated Induction of DNMT3B Expression

Rajendra Kumar Palakurthy, Narendra Wajapeyee, Manas K. Santra, Claude Gazin, Ling Lin, Stephane Gobeil, Michael R. Green

Mol Cell. Author manuscript; available in PMC 2010 Apr 23.

Published in final edited form as: Mol Cell. 2009 Oct 23; 36(2): 219–230. doi: 10.1016/j.molcel.2009.10.009

PMCID:: PMC2776651

Abstract Article PDF–2.7M

Select item 274057211.

A Genome-wide Short Hairpin RNA Screening of Jurkat T-cells for Human Proteins Contributing to Productive HIV-1 Replication

Man Lung Yeung, Laurent Houzet, Venkat S. R. K. Yedavalli, Kuan-Teh Jeang

J Biol Chem. 2009 Jul 17; 284(29): 19463–19473. Published online 2009 May 20. doi: 10.1074/jbc.M109.010033

PMCID:: PMC2740572

Abstract Article PDF–2.5M

Select item 271957212.

Induction of HoxB Transcription by Retinoic Acid Requires Actin Polymerization

Carmelo Ferrai, Gabriela Naum-Onganía, Elena Longobardi, Martina Palazzolo, Andrea Disanza, Victor M. Diaz, Massimo P. Crippa, Giorgio Scita, Francesco Blasi

Mol Biol Cell. 2009 Aug 1; 20(15): 3543–3551. doi: 10.1091/mbc.E09-02-0114

PMCID:: PMC2719572

Abstract Article PDF–861K

Select item 135612913.

Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano

Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406