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Items: 1 to 20 of 26

1.
Celf4 controls mRNA translation underlying synaptic development in the prenatal mammalian neocortex
Iva Salamon, Yongkyu Park, Terezija Miškić, Janja Kopić, Paul Matteson, Nicholas F. Page, Alfonso Roque, Geoffrey W. McAuliffe, John Favate, Marta Garcia-Forn, Premal Shah, Miloš Judaš, James H. Millonig, Ivica Kostović, Silvia De Rubeis, Ronald P. Hart, Željka Krsnik, Mladen-Roko Rasin
Nat Commun. 2023; 14: 6025. Published online 2023 Sep 27. doi: 10.1038/s41467-023-41730-8
PMCID:
PMC10533865
AbstractArticlePDF–4.9M
2.
The mRNA translation initiation factor eIF4G1 controls mitochondrial oxidative phosphorylation, axonal morphogenesis, and memory
Sung-Hoon Kim, Jung-Hyun Choi, Laura Marsal-García, Mehdi Amiri, Akiko Yanagiya, Nahum Sonenberg
Proc Natl Acad Sci U S A. 2023 Jun 20; 120(25): e2300008120. Published online 2023 Jun 12. doi: 10.1073/pnas.2300008120
PMCID:
PMC10288579
AbstractArticlePDF–4.2M
3.
USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities
Chao Liu, Lingang Sun, Yijun Tan, Qi Wang, Tao Luo, Chenlu Li, Nan Yao, Yuting Xie, Xiao Yi, Yi Zhu, Tiannan Guo, Junfeng Ji
Sci Adv. 2023 May; 9(20): eade3888. Published online 2023 May 17. doi: 10.1126/sciadv.ade3888
PMCID:
PMC10191441
AbstractArticlePDF–2.4M
4.
Cell-type-specific translational control of spatial working memory by the cap-binding protein 4EHP
Shane Wiebe, Ziying Huang, Reese Jalal Ladak, Agnieszka Skalecka, Roberta Cagnetta, Jean-Claude Lacaille, Argel Aguilar-Valles, Nahum Sonenberg
Mol Brain. 2023; 16: 9. Published online 2023 Jan 18. doi: 10.1186/s13041-023-00995-2
PMCID:
PMC9847188
AbstractArticlePDF–1.9M
5.
The eIF4E homolog 4EHP (eIF4E2) regulates hippocampal long-term depression and impacts social behavior
Shane Wiebe, Xiang Qi Meng, Sung-Hoon Kim, Xu Zhang, Jean-Claude Lacaille, Argel Aguilar-Valles, Nahum Sonenberg
Mol Autism. 2020; 11: 92. Published online 2020 Nov 23. doi: 10.1186/s13229-020-00394-7
PMCID:
PMC7682028
AbstractArticlePDF–5.6M
6.
BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)
Kou Motani, Hidetaka Kosako
J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323
PMCID:
PMC7415991
AbstractArticlePDF–2.0M
7.
New roles for the de-ubiquitylating enzyme OTUD4 in an RNA–protein network and RNA granules
Richa Das, Lukas Schwintzer, Stanislav Vinopal, Eva Aguado Roca, Marc Sylvester, Ana-Maria Oprisoreanu, Susanne Schoch, Frank Bradke, Meike Broemer
J Cell Sci. 2019 Jun 15; 132(12): jcs229252. Published online 2019 Jun 17. doi: 10.1242/jcs.229252
PMCID:
PMC6602300
AbstractArticle
8.
A threonyl-tRNA synthetase-mediated translation initiation machinery
Seung Jae Jeong, Shinhye Park, Loi T. Nguyen, Jungwon Hwang, Eun-Young Lee, Hoi-Khoanh Giong, Jeong-Soo Lee, Ina Yoon, Ji-Hyun Lee, Jong Hyun Kim, Hoi Kyoung Kim, Doyeun Kim, Won Suk Yang, Seon-Young Kim, Chan Yong Lee, Kweon Yu, Nahum Sonenberg, Myung Hee Kim, Sunghoon Kim
Nat Commun. 2019; 10: 1357. Published online 2019 Mar 22. doi: 10.1038/s41467-019-09086-0
PMCID:
PMC6430810
AbstractArticlePDF–2.6M
9.
Cap-binding protein 4EHP effects translation silencing by microRNAs
Clément Chapat, Seyed Mehdi Jafarnejad, Edna Matta-Camacho, Geoffrey G. Hesketh, Idit A. Gelbart, Jan Attig, Christos G. Gkogkas, Tommy Alain, Noam Stern-Ginossar, Marc R. Fabian, Anne-Claude Gingras, Thomas F. Duchaine, Nahum Sonenberg
Proc Natl Acad Sci U S A. 2017 May 23; 114(21): 5425–5430. Published online 2017 May 9. doi: 10.1073/pnas.1701488114
PMCID:
PMC5448183
AbstractArticlePDF–1019K
10.
Decreased expression levels of Ifi genes is associated to the increased resistance to spontaneous arthritis disease in mice deficiency of IL-1RA
Xiaoyun Liu, Yan Jiao, Yanhong Cao, Nan Deng, Yonghui Ma, Karen A. Hasty, Andrew Kang, Hong Chen, John M. Stuart, Weikuan Gu
BMC Immunol. 2016; 17: 25. Published online 2016 Aug 2. doi: 10.1186/s12865-016-0163-y
PMCID:
PMC4970213
AbstractArticlePDF–2.5M
11.
The E3 Ubiquitin Ligase ARIH1 Protects against Genotoxic Stress by Initiating a 4EHP-Mediated mRNA Translation Arrest
Louise von Stechow, Dimitris Typas, Jordi Carreras Puigvert, Laurens Oort, Ramakrishnaiah Siddappa, Alex Pines, Harry Vrieling, Bob van de Water, Leon H. F. Mullenders, Erik H. J. Danen
Mol Cell Biol. 2015 Apr; 35(7): 1254–1268. Prepublished online 2015 Jan 26. Published online 2015 Mar 10. doi: 10.1128/MCB.01152-14
PMCID:
PMC4355526
AbstractArticlePDF–3.4M
12.
A Novel 4EHP-GIGYF2 Translational Repressor Complex Is Essential for Mammalian Development
Masahiro Morita, Lian Wee Ler, Marc R. Fabian, Nadeem Siddiqui, Michael Mullin, Valerie C. Henderson, Tommy Alain, Bruno D. Fonseca, Galina Karashchuk, Christopher F. Bennett, Tomohiro Kabuta, Shinji Higashi, Ola Larsson, Ivan Topisirovic, Robert J. Smith, Anne-Claude Gingras, Nahum Sonenberg
Mol Cell Biol. 2012 Sep; 32(17): 3585–3593. doi: 10.1128/MCB.00455-12
PMCID:
PMC3422012
AbstractArticlePDF–1.3M
13.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
14.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
15.
Cytoplasmic Prep1 Interacts with 4EHP Inhibiting Hoxb4 Translation
J. Carlos Villaescusa, Claudia Buratti, Dmitry Penkov, Lisa Mathiasen, Jesús Planagumà, Elisabetta Ferretti, Francesco Blasi
PLoS One. 2009; 4(4): e5213. Published online 2009 Apr 13. doi: 10.1371/journal.pone.0005213
PMCID:
PMC2664923
AbstractArticlePDF–1.3M
16.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K
17.
BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System
Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran
PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086
PMCID:
PMC1413568
ArticlePDF–99K
18.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K
19.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
20.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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