PMC Links for GEO Profiles (Select 131304534) - PMC

Select item 98583541.

Studies with neutralizing antibodies suggest CXCL8-mediated neutrophil activation is independent of C-C motif chemokine receptor-like 2 (CCRL2) ligand binding function

Zhenwei Su, Jonathan Brooks, Jeffrey Pelker, Tatyana Andreyeva, Hanna Sobon, Roger Gifford, Matthew Powers, Jing Wang, Corey Dower, Martin Hegen, Dean Messing, Alfredo Darmanin Sheehan, Joseph J. Brennan

PLoS One. 2023; 18(1): e0280590. Published online 2023 Jan 20. doi: 10.1371/journal.pone.0280590

PMCID:: PMC9858354

Abstract Article PDF–2.4M

Select item 84087702.

Genomics Links Inflammation With Neurocognitive Impairment in Children Living With Human Immunodeficiency Virus Type-1

Pratima Rawat, Sean S Brummel, Kumud K Singh, Jihoon Kim, Kelly A Frazer, Sharon Nichols, George R Seage, III, Paige L Williams, Russell B Van Dyke, Olivier Harismendy, Rodney N Trout, Stephen A Spector

J Infect Dis. 2021 Sep 1; 224(5): 870–880. Published online 2020 Dec 29. doi: 10.1093/infdis/jiaa792

PMCID:: PMC8408770

Abstract Article PDF–2.3M

Select item 81650303.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 71764874.

The atypical receptor CCRL2 is essential for NK cell-dependent resistance against lung cancer

Annalisa Del Prete, Francesca Sozio, Tiziana Schioppa, Andrea Ponzetta, William Vermi, Stefano Calza, Mattia Bugatti, Valentina Salvi, Giovanni Bernardini, Federica Benvenuti, Annunciata Vecchi, Barbara Bottazzi, Alberto Mantovani, Silvano Sozzani

Cancer Immunol Res. Author manuscript; available in PMC 2020 Nov 1.

Published in final edited form as: Cancer Immunol Res. 2019 Nov 1; 7(11): 1775–1788. Published online 2019 Sep 4. doi: 10.1158/2326-6066.CIR-19-0168

PMCID:: PMC7176487

Abstract Article PDF–2.3M

Select item 71699835.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 55316116.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 46172117.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 42076678.

Genome-Wide Association Study of CSF Levels of 59 Alzheimer's Disease Candidate Proteins: Significant Associations with Proteins Involved in Amyloid Processing and Inflammation

John S. K. Kauwe, Matthew H. Bailey, Perry G. Ridge, Rachel Perry, Mark E. Wadsworth, Kaitlyn L. Hoyt, Lyndsay A. Staley, Celeste M. Karch, Oscar Harari, Carlos Cruchaga, Benjamin J. Ainscough, Kelly Bales, Eve H. Pickering, Sarah Bertelsen, the Alzheimer's Disease Neuroimaging Initiative, Anne M. Fagan, David M. Holtzman, John C. Morris, Alison M. Goate

PLoS Genet. 2014 Oct; 10(10): e1004758. Published online 2014 Oct 23. doi: 10.1371/journal.pgen.1004758

PMCID:: PMC4207667

Abstract Article PDF–602K

Select item 38706599.

HIV-1 gp120 impairs B cell proliferation by inducing TGF-ß1 production and FcRL4 expression

Katija Jelicic, Raffaello Cimbro, Fatima Nawaz, Da Wei Huang, Xin Zheng, Jun Yang, Richard A. Lempicki, Massimiliano Pascuccio, Donald Van Ryk, Catherine Schwing, Joseph Hiatt, Noreen Okwara, Danlan Wei, Gregg Roby, Antonio David, Young Hwang, II, John H. Kehrl, James Arthos, Claudia Cicala, Anthony S. Fauci

Nat Immunol. Author manuscript; available in PMC 2014 Jun 1.

Published in final edited form as: Nat Immunol. 2013 Dec; 14(12): 1256–1265. Published online 2013 Oct 27. doi: 10.1038/ni.2746

PMCID:: PMC3870659

Abstract Article PDF–1.4M

Select item 320319910.

Role of Exonic Variation in Chemokine Receptor Genes on AIDS: CCRL2 F167Y Association with Pneumocystis Pneumonia

Ping An, Rongling Li, Ji Ming Wang, Teizo Yoshimura, Munehisa Takahashi, Ram Samudralal, Stephen J. O'Brien, John Phair, James J. Goedert, Gregory D. Kirk, Jennifer L. Troyer, Efe Sezgin, Susan P. Buchbinder, Sharyne Donfield, George W. Nelson, Cheryl A. Winkler

PLoS Genet. 2011 Oct; 7(10): e1002328. Published online 2011 Oct 27. doi: 10.1371/journal.pgen.1002328

PMCID:: PMC3203199

Abstract Article PDF–572K

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 308091012.

Genome-wide Association Study Implicates PARD3B-based AIDS Restriction

Jennifer L. Troyer, George W. Nelson, James A. Lautenberger, Leslie Chinn, Carl McIntosh, Randall C. Johnson, Efe Sezgin, Bailey Kessing, Michael Malasky, Sher L. Hendrickson, Guan Li, Joan Pontius, Minzhong Tang, Ping An, Cheryl A. Winkler, Sophie Limou, Sigrid Le Clerc, Olivier Delaneau, Jean-François Zagury, Hanneke Schuitemaker, Daniëlle van Manen, Jay H. Bream, Edward D. Gomperts, Susan Buchbinder, James J. Goedert, Gregory D. Kirk, Stephen J. O'Brien

J Infect Dis. 2011 May 15; 203(10): 1491–1502. doi: 10.1093/infdis/jir046

PMCID:: PMC3080910

Abstract Article PDF–870K

Select item 284761813.

Multiple common variants for celiac disease influencing immune gene expression

Patrick CA Dubois, Gosia Trynka, Lude Franke, Karen A Hunt, Jihane Romanos, Alessandra Curtotti, Alexandra Zhernakova, Graham AR Heap, Róza Ádány, Arpo Aromaa, Maria Teresa Bardella, Leonard H van den Berg, Nicholas A Bockett, Emilio G. de la Concha, Bárbara Dema, Rudolf SN Fehrmann, Miguel Fernández-Arquero, Szilvia Fiatal, Elvira Grandone, Peter M Green, Harry JM Groen, Rhian Gwilliam, Roderick HJ Houwen, Sarah E Hunt, Katri Kaukinen, Dermot Kelleher, Ilma Korponay-Szabo, Kalle Kurppa, Padraic MacMathuna, Markku Mäki, Maria Cristina Mazzilli, Owen T McCann, M Luisa Mearin, Charles A Mein, Muddassar M Mirza, Vanisha Mistry, Barbara Mora, Katherine I Morley, Chris J Mulder, Joseph A Murray, Concepción Núñez, Elvira Oosterom, Roel A Ophoff, Isabel Polanco, Leena Peltonen, Mathieu Platteel, Anna Rybak, Veikko Salomaa, Joachim J Schweizer, Maria Pia Sperandeo, Greetje J Tack, Graham Turner, Jan H Veldink, Wieke HM Verbeek, Rinse K Weersma, Victorien M Wolters, Elena Urcelay, Bozena Cukrowska, Luigi Greco, Susan L. Neuhausen, Ross McManus, Donatella Barisani, Panos Deloukas, Jeffrey C Barrett, Paivi Saavalainen, Cisca Wijmenga, David A van Heel

Nat Genet. Author manuscript; available in PMC 2010 Oct 1.

Published in final edited form as: Nat Genet. 2010 Apr; 42(4): 295–302. Published online 2010 Feb 28. doi: 10.1038/ng.543

Correction in:: volume 42 on page 465

PMCID:: PMC2847618

Abstract Article PDF–1.0M

Select item 284250014.

CCL19 is a specific ligand of the constitutively recycling atypical human chemokine receptor CRAM-B

Marion Leick, Julie Catusse, Marie Follo, Robert J Nibbs, Tanja N Hartmann, Hendrik Veelken, Meike Burger

Immunology. 2010 Apr; 129(4): 536–546. doi: 10.1111/j.1365-2567.2009.03209.x

PMCID:: PMC2842500

Abstract Article PDF–353K

Select item 255679115.

Mast cell–expressed orphan receptor CCRL2 binds chemerin and is required for optimal induction of IgE-mediated passive cutaneous anaphylaxis

Brian A. Zabel, Susumu Nakae, Luis Zúñiga, Ji-Yun Kim, Takao Ohyama, Carsten Alt, Junliang Pan, Hajime Suto, Dulce Soler, Samantha J. Allen, Tracy M. Handel, Chang Ho Song, Stephen J. Galli, Eugene C. Butcher

J Exp Med. 2008 Sep 29; 205(10): 2207–2220. doi: 10.1084/jem.20080300

PMCID:: PMC2556791

Abstract Article PDF–2.6M

Select item 219421216.

Specific Recruitment of Antigen-presenting Cells by Chemerin, a Novel Processed Ligand from Human Inflammatory Fluids

Valérie Wittamer, Jean-Denis Franssen, Marisa Vulcano, Jean-François Mirjolet, Emmanuel Le Poul, Isabelle Migeotte, Stéphane Brézillon, Richard Tyldesley, Cédric Blanpain, Michel Detheux, Alberto Mantovani, Silvano Sozzani, Gilbert Vassart, Marc Parmentier, David Communi

J Exp Med. 2003 Oct 6; 198(7): 977–985. doi: 10.1084/jem.20030382

PMCID:: PMC2194212

Abstract Article PDF–250K

Select item 52892817.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 13924118.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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