PMC Links for GEO Profiles (Select 131471694) - PMC

Qianhua Dong, Feng-xiang Yin, Feng Gao, Yuan Shen, Faben Zhang, Yang Li, Haijin He, Marlyn Gonzalez, Jinpu Yang, Shu Zhang, Min Su, Yu-hang Chen, Fei Li

Mol Cell. Author manuscript; available in PMC 2017 Oct 6.

Published in final edited form as: Mol Cell. 2016 Oct 6; 64(1): 79–91. Published online 2016 Sep 22. doi: 10.1016/j.molcel.2016.08.022

PMCID:: PMC5055466

Abstract Article PDF–1.8M

Select item 47152676.

A proteome-wide fission yeast interactome reveals network evolution principles from yeasts to human

Tommy V. Vo, Jishnu Das, Michael J. Meyer, Nicolas A. Cordero, Nurten Akturk, Xiaomu Wei, Benjamin J. Fair, Andrew G. Degatano, Robert Fragoza, Lisa G. Liu, Akihisa Matsuyama, Michelle Trickey, Sachi Horibata, Andrew Grimson, Hiroyuki Yamano, Minoru Yoshida, Frederick P. Roth, Jeffrey A. Pleiss, Yu Xia, Haiyuan Yu

Cell. Author manuscript; available in PMC 2017 Jan 14.

Published in final edited form as: Cell. 2016 Jan 14; 164(0): 310–323. doi: 10.1016/j.cell.2015.11.037

PMCID:: PMC4715267

Abstract Article PDF–1.4M

Select item 41970477.

Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts

Shajahan Anver, Assen Roguev, Martin Zofall, Nevan J Krogan, Shiv I S Grewal, Stacey L Harmer

EMBO Rep. 2014 Aug; 15(8): 894–902. Published online 2014 Jun 23. doi: 10.15252/embr.201438902

PMCID:: PMC4197047

Abstract Article PDF–1.2M

Select item 40190668.

H2A.Z-Dependent Regulation of Cohesin Dynamics on Chromosome Arms

Claudia Tapia-Alveal, Su-Jiun Lin, Aaron Yeoh, Omar J. Jabado, Matthew J. O'Connell

Mol Cell Biol. 2014 Jun; 34(11): 2092–2104. doi: 10.1128/MCB.00193-14

PMCID:: PMC4019066

Abstract Article PDF–2.6M

Select item 37782429.

Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries

Jiyong Wang, Xavier Tadeo, Haitong Hou, Patricia G. Tu, James Thompson, John R. Yates, III, Songtao Jia

Genes Dev. 2013 Sep 1; 27(17): 1886–1902. doi: 10.1101/gad.221010.113

PMCID:: PMC3778242

Abstract Article PDF–1.8M

Select item 377772710.

Cross-Species Protein Interactome Mapping Reveals Species-Specific Wiring of Stress-Response Pathways

Jishnu Das, Tommy V. Vo, Xiaomu Wei, Joseph C. Mellor, Virginia Tong, Andrew G. Degatano, Xiujuan Wang, Lihua Wang, Nicolas A. Cordero, Nathan Kruer-Zerhusen, Akihisa Matsuyama, Jeffrey A. Pleiss, Steven M. Lipkin, Minoru Yoshida, Frederick P. Roth, Haiyuan Yu

Sci Signal. Author manuscript; available in PMC 2013 Nov 21.

Published in final edited form as: Sci Signal. 2013 May 21; 6(276): ra38. Published online 2013 May 21. doi: 10.1126/scisignal.2003350

PMCID:: PMC3777727

Abstract Article PDF–1002K

Select item 346410811.

A Genetic Screen to Discover Pathways Affecting Cohesin Function in Schizosaccharomyces pombe Identifies Chromatin Effectors

Zhiming Chen, Scott McCroskey, Weichao Guo, Hua Li, Jennifer L. Gerton

G3 (Bethesda) 2012 Oct; 2(10): 1161–1168. Published online 2012 Oct 1. doi: 10.1534/g3.112.003327

PMCID:: PMC3464108

Abstract Article PDF–1.2M

Select item 338063612.

Hierarchical modularity and the evolution of genetic interactomes across species

Colm J. Ryan, Assen Roguev, Kristin Patrick, Jiewei Xu, Harlizawati Jahari, Zongtian Tong, Pedro Beltrao, Michael Shales, Hong Qu, Sean R. Collins, Joseph I. Kliegman, Lingli Jiang, Dwight Kuo, Elena Tosti, Hyun-Soo Kim, Winfried Edelmann, Michael-Christopher Keogh, Derek Greene, Chao Tang, Pádraig Cunningham, Kevan M. Shokat, Gerard Cagney, J. Peter Svensson, Christine Guthrie, Peter J. Espenshade, Trey Ideker, Nevan J. Krogan

Mol Cell. Author manuscript; available in PMC 2013 Jun 8.

Published in final edited form as: Mol Cell. 2012 Jun 8; 46(5): 691–704. doi: 10.1016/j.molcel.2012.05.028

PMCID:: PMC3380636

Abstract Article PDF–2.1M

Select item 316191013.

Podbat: A Novel Genomic Tool Reveals Swr1-Independent H2A.Z Incorporation at Gene Coding Sequences through Epigenetic Meta-Analysis

Laia Sadeghi, Carolina Bonilla, Annelie Strålfors, Karl Ekwall, J. Peter Svensson

PLoS Comput Biol. 2011 Aug; 7(8): e1002163. Published online 2011 Aug 25. doi: 10.1371/journal.pcbi.1002163

PMCID:: PMC3161910

Abstract Article PDF–484K

Select item 296450914.

Improved tools for efficient mapping of fission yeast genes: identification of microtubule nucleation modifier mod22-1 as an allele of chromatin- remodelling factor gene swr1

Andreas Anders, Stephen Watt, Jürg Bähler, Kenneth E Sawin

Yeast. 2008 Dec; 25(12): 913–925. doi: 10.1002/yea.1639

PMCID:: PMC2964509

Abstract Article PDF–222K

Select item 280434915.

Histone Variant H2A.Z Regulates Centromere Silencing and Chromosome Segregation in Fission Yeast

Haitong Hou, Yu Wang, Scott P. Kallgren, James Thompson, John R. Yates, III, Songtao Jia

J Biol Chem. 2010 Jan 15; 285(3): 1909–1918. Published online 2009 Nov 12. doi: 10.1074/jbc.M109.058487

PMCID:: PMC2804349

Abstract Article PDF–2.1M

Select item 278867416.

An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe

Hyun-Soo Kim, Vincent Vanoosthuyse, Jeffrey Fillingham, Assen Roguev, Stephen Watt, Thomas Kislinger, Alex Treyer, Laura Rocco Carpenter, Christopher S. Bennett, Andrew Emili, Jack F. Greenblatt, Kevin G. Hardwick, Nevan J. Krogan, Jürg Bähler, Michael-Christopher Keogh

Nat Struct Mol Biol. Author manuscript; available in PMC 2010 Jun 1.

Published in final edited form as: Nat Struct Mol Biol. 2009 Dec; 16(12): 1286–1293. Published online 2009 Nov 15. doi: 10.1038/nsmb.1688

PMCID:: PMC2788674

Abstract Article PDF–2.4M

Select item 275325117.

Conservation and Rewiring of Functional Modules Revealed by an Epistasis Map in Fission Yeast

Assen Roguev, Sourav Bandyopadhyay, Martin Zofall, Ke Zhang, Tamas Fischer, Sean R. Collins, Hongjing Qu, Michael Shales, Han-Oh Park, Jacqueline Hayles, Kwang-Lae Hoe, Dong-Uk Kim, Trey Ideker, Shiv I. Grewal, Jonathan S. Weissman, Nevan J. Krogan

Science. Author manuscript; available in PMC 2009 Sep 28.

Published in final edited form as: Science. 2008 Oct 17; 322(5900): 405–410. Published online 2008 Sep 25. doi: 10.1126/science.1162609

PMCID:: PMC2753251

Abstract Article PDF–4.2M

Select item 274625818.

Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs

Martin Zofall, Tamás Fischer, Ke Zhang, Ming Zhou, Bowen Cui, Timothy D. Veenstra, Shiv I. S. Grewal

Nature. Author manuscript; available in PMC 2010 Mar 17.

Published in final edited form as: Nature. 2009 Sep 17; 461(7262): 419–422. Published online 2009 Aug 19. doi: 10.1038/nature08321

PMCID:: PMC2746258

Abstract Article PDF–875K

Select item 269159919.

Evolution of Phosphoregulation: Comparison of Phosphorylation Patterns across Yeast Species

Pedro Beltrao, Jonathan C. Trinidad, Dorothea Fiedler, Assen Roguev, Wendell A. Lim, Kevan M. Shokat, Alma L. Burlingame, Nevan J. Krogan

PLoS Biol. 2009 Jun; 7(6): e1000134. Published online 2009 Jun 23. doi: 10.1371/journal.pbio.1000134

Correction in:: PLoS Biol. 2009 Nov; 7(11): 10.1371/annotation/66479889-5e57-4213-bf25-c4e8cf3d933b.

PMCID:: PMC2691599

Abstract Article PDF–659K

Select item 261448120.

Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment

Anna Shevchenko, Assen Roguev, Daniel Schaft, Luke Buchanan, Bianca Habermann, Cagri Sakalar, Henrik Thomas, Nevan J Krogan, Andrej Shevchenko, A Francis Stewart

Genome Biol. 2008; 9(11): R167. Published online 2008 Nov 28. doi: 10.1186/gb-2008-9-11-r167

PMCID:: PMC2614481

Abstract Article PDF–920K

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