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Items: 1 to 20 of 59

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
3.
Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress
Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman
Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1
PMCID:
PMC10521137
AbstractArticlePDF–4.0M
4.
An essential Noc3p dimerization cycle mediates ORC double-hexamer formation in replication licensing
Aftab Amin, Rentian Wu, Muhammad Ajmal Khan, Man Hei Cheung, Yanting Liang, Changdong Liu, Guang Zhu, Zhi-Ling Yu, Chun Liang
Life Sci Alliance. 2023 Mar; 6(3): e202201594. Published online 2023 Jan 4. doi: 10.26508/lsa.202201594
PMCID:
PMC9813392
AbstractArticlePDF–4.3M
5.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
6.
Rad53 checkpoint kinase regulation of DNA replication fork rate via Mrc1 phosphorylation
Allison W McClure, John FX Diffley
eLife. 2021; 10: e69726. Published online 2021 Aug 13. doi: 10.7554/eLife.69726
PMCID:
PMC8387023
AbstractArticlePDF–4.9M
7.
Interaction of replication factor Sld3 and histone acetyl transferase Esa1 alleviates gene silencing and promotes the activation of late and dormant replication origins
Seiji Tanaka
Genetics. 2021 Jan; 217(1): iyaa001. Published online 2020 Nov 11. doi: 10.1093/genetics/iyaa001
PMCID:
PMC8045687
AbstractArticlePDF–873K
8.
Checkpoint inhibition of origin firing prevents inappropriate replication outside of S-phase
Mark C Johnson, Geylani Can, Miguel Monteiro Santos, Diana Alexander, Philip Zegerman
eLife. 2021; 10: e63589. Published online 2021 Jan 5. doi: 10.7554/eLife.63589
PMCID:
PMC7806266
AbstractArticlePDF–1.5M
9.
The role of Rif1 in telomere length regulation is separable from its role in origin firing
Calla B Shubin, Carol W Greider
eLife. 2020; 9: e58066. Published online 2020 Jun 29. doi: 10.7554/eLife.58066
PMCID:
PMC7371424
AbstractArticlePDF–2.7M
10.
Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast
Wei-Chun Au, Tianyi Zhang, Prashant K. Mishra, Jessica R. Eisenstatt, Robert L. Walker, Josefina Ocampo, Anthony Dawson, Jack Warren, Michael Costanzo, Anastasia Baryshnikova, Karin Flick, David J. Clark, Paul S. Meltzer, Richard E. Baker, Chad Myers, Charles Boone, Peter Kaiser, Munira A. Basrai
PLoS Genet. 2020 Feb; 16(2): e1008597. Published online 2020 Feb 7. doi: 10.1371/journal.pgen.1008597
PMCID:
PMC7032732
AbstractArticlePDF–3.9M
11.
Checkpoint inhibition of origin firing prevents DNA topological stress
Esther C. Morafraile, Christine Hänni, George Allen, Theresa Zeisner, Caroline Clarke, Mark C. Johnson, Miguel M. Santos, Lauren Carroll, Nicola E. Minchell, Jonathan Baxter, Peter Banks, Dave Lydall, Philip Zegerman
Genes Dev. 2019 Nov 1; 33(21-22): 1539–1554. doi: 10.1101/gad.328682.119
PMCID:
PMC6824463
AbstractArticlePDF–5.0M
12.
The effects of manipulating levels of replication initiation factors on origin firing efficiency in yeast
Kelsey L. Lynch, Gina M. Alvino, Elizabeth X. Kwan, Bonita J. Brewer, M. K. Raghuraman
PLoS Genet. 2019 Oct; 15(10): e1008430. Published online 2019 Oct 4. doi: 10.1371/journal.pgen.1008430
PMCID:
PMC6795477
AbstractArticlePDF–5.4M
13.
Inhibition of spindle extension through the yeast S phase checkpoint is coupled to replication fork stability and the integrity of centromeric DNA
Jeff Julius, Jie Peng, Andrew McCulley, Chris Caridi, Remigiusz Arnak, Colby See, Constance I. Nugent, Wenyi Feng, Jeff Bachant
Mol Biol Cell. 2019 Oct 15; 30(22): 2771–2789. doi: 10.1091/mbc.E19-03-0156
PMCID:
PMC6789157
AbstractArticlePDF–13M
14.
Helicase Subunit Cdc45 Targets the Checkpoint Kinase Rad53 to Both Replication Initiation and Elongation Complexes after Fork Stalling
Geylani Can, Anastasia Christine Kauerhof, Dominik Macak, Philip Zegerman
Mol Cell. 2019 Feb 7; 73(3): 562–573.e3. doi: 10.1016/j.molcel.2018.11.025
PMCID:
PMC6375734
AbstractArticlePDF–4.2M
15.
The Yeast DNA Damage Checkpoint Kinase Rad53 Targets the Exoribonuclease, Xrn1
Jessica P. Lao, Katie M. Ulrich, Jeffrey R. Johnson, Billy W. Newton, Ajay A. Vashisht, James A. Wohlschlegel, Nevan J. Krogan, David P. Toczyski
G3 (Bethesda) 2018 Dec; 8(12): 3931–3944. Published online 2018 Oct 30. doi: 10.1534/g3.118.200767
PMCID:
PMC6288840
AbstractArticlePDF–2.1M
16.
Systematic Analysis of Complex Genetic Interactions
Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers
Science. Author manuscript; available in PMC 2018 Nov 4.
Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729
PMCID:
PMC6215713
AbstractArticlePDF–1.9M
17.
An interplay between multiple sirtuins promotes completion of DNA replication in cells with short telomeres
Antoine Simoneau, Étienne Ricard, Hugo Wurtele
PLoS Genet. 2018 Apr; 14(4): e1007356. Published online 2018 Apr 16. doi: 10.1371/journal.pgen.1007356
PMCID:
PMC5919697
AbstractArticlePDF–30M
18.
Dbf4 recruitment by forkhead transcription factors defines an upstream rate-limiting step in determining origin firing timing
Dingqiang Fang, Armelle Lengronne, Di Shi, Romain Forey, Magdalena Skrzypczak, Krzysztof Ginalski, Changhui Yan, Xiaoke Wang, Qinhong Cao, Philippe Pasero, Huiqiang Lou
Genes Dev. 2017 Dec 1; 31(23-24): 2405–2415. doi: 10.1101/gad.306571.117
PMCID:
PMC5795786
AbstractArticlePDF–7.1M
19.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
20.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M

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