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Items: 1 to 20 of 26

1.
NUDT16 regulates CtIP PARylation to dictate homologous recombination repair
Zhen Zhang, William E Samsa, Zihua Gong
Nucleic Acids Res. 2024 Apr 24; 52(7): 3761–3777. Published online 2024 Feb 7. doi: 10.1093/nar/gkae064
PMCID:
PMC11039996
AbstractArticlePDF–2.4M
2.
TRIM67 drives tumorigenesis in oligodendrogliomas through Rho GTPase-dependent membrane blebbing
Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan
Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233
PMCID:
PMC10237422
AbstractArticlePDF–23M
3.
Interactomic analysis reveals a homeostatic role for the HIV restriction factor TRIM5α in mitophagy
Bhaskar Saha, Michelle Salemi, Geneva L. Williams, Seeun Oh, Michael L. Paffett, Brett Phinney, Michael A. Mandell
Cell Rep. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell Rep. 2022 May 10; 39(6): 110797. doi: 10.1016/j.celrep.2022.110797
PMCID:
PMC9136943
AbstractArticlePDF–3.2M
4.
Transcriptomic profile investigations highlight a putative role for NUDT16 in sepsis
Susie Shih Yin Huang, Darawan Rinchai, Mohammed Toufiq, Basirudeen Syed Ahamed Kabeer, Jessica Roelands, Wouter Hendrickx, Sabri Boughorbel, Davide Bedognetti, Nicholas Van Panhuys, Damien Chaussabel, Mathieu Garand
J Cell Mol Med. 2022 Mar; 26(5): 1714–1721. Published online 2022 Feb 17. doi: 10.1111/jcmm.17240
PMCID:
PMC8899167
AbstractArticlePDF–411K
5.
Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins
Benjamin Lang, Jae-Seong Yang, Mireia Garriga-Canut, Silvia Speroni, Moritz Aschern, Maria Gili, Tobias Hoffmann, Gian Gaetano Tartaglia, Sebastian P Maurer
Nucleic Acids Res. 2021 Jul 9; 49(12): 6702–6721. Published online 2021 Jun 16. doi: 10.1093/nar/gkab490
PMCID:
PMC8266617
AbstractArticlePDF–4.0M
6.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
7.
CAG RNAs induce DNA damage and apoptosis by silencing NUDT16 expression in polyglutamine degeneration
Shaohong Peng, Pei Guo, Xiao Lin, Ying An, Kong Hung Sze, Matthew Ho Yan Lau, Zhefan Stephen Chen, Qianwen Wang, Wen Li, Jacquelyne Ka-Li Sun, Sum Yi Ma, Ting-Fung Chan, Kwok-Fai Lau, Jacky Chi Ki Ngo, Kin Ming Kwan, Chun-Ho Wong, Sik Lok Lam, Steven C. Zimmerman, Tiziano Tuccinardi, Zhong Zuo, Ho Yu Au-Yeung, Hei-Man Chow, Ho Yin Edwin Chan
Proc Natl Acad Sci U S A. 2021 May 11; 118(19): e2022940118. Published online 2021 May 4. doi: 10.1073/pnas.2022940118
PMCID:
PMC8126783
AbstractArticlePDF–3.4M
8.
BCAR1 promotes proliferation and cell growth in lung adenocarcinoma via upregulation of POLR2A
Chun‐guo Mao, Sha‐sha Jiang, Cheng Shen, Tan Long, Hua Jin, Qun‐You Tan, Bo Deng
Thorac Cancer. 2020 Nov; 11(11): 3326–3336. Published online 2020 Oct 1. doi: 10.1111/1759-7714.13676
PMCID:
PMC7606008
AbstractArticlePDF–2.5M
9.
Mammalian Nudix proteins cleave nucleotide metabolite caps on RNAs
Sunny Sharma, Ewa Grudzien-Nogalska, Keith Hamilton, Xinfu Jiao, Jun Yang, Liang Tong, Megerditch Kiledjian
Nucleic Acids Res. 2020 Jul 9; 48(12): 6788–6798. Published online 2020 May 20. doi: 10.1093/nar/gkaa402
PMCID:
PMC7337524
AbstractArticlePDF–2.4M
10.
Nudix hydrolase NUDT16 regulates 53BP1 protein by reversing 53BP1 ADP-ribosylation
Fan Zhang, Lihong Lou, Bo Peng, Xiaotian Song, Ofer Reizes, Alexandru Almasan, Zihua Gong
Cancer Res. Author manuscript; available in PMC 2020 Sep 1.
Published in final edited form as: Cancer Res. 2020 Mar 1; 80(5): 999–1010. Published online 2020 Jan 7. doi: 10.1158/0008-5472.CAN-19-2205
Correction in:
Cancer Res. 2022 Aug 3; 82(15): 2807.
PMCID:
PMC7056578
AbstractArticlePDF–2.1M
11.
Hydrolytic activity of human Nudt16 enzyme on dinucleotide cap analogs and short capped oligonucleotides
Renata Grzela, Karolina Nasilowska, Maciej Lukaszewicz, Michal Tyras, Janusz Stepinski, Marzena Jankowska-Anyszka, Elzbieta Bojarska, Edward Darzynkiewicz
RNA. 2018 May; 24(5): 633–642. doi: 10.1261/rna.065698.118
PMCID:
PMC5900562
AbstractArticlePDF–4.4M
12.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
13.
Epigenetic loss of the RNA decapping enzyme NUDT16 mediates C-MYC activation in T-cell acute lymphoblastic leukemia
C Anadón, G van Tetering, H J Ferreira, C Moutinho, A Martínez-Cardús, A Villanueva, M Soler, H Heyn, S Moran, M Castro de Moura, F Setien, A Vidal, E Genescà, J M Ribera, J F Nomdedeu, S Guil, M Esteller
Leukemia. 2017 Jul; 31(7): 1622–1625. Prepublished online 2017 Mar 27. Published online 2017 Apr 11. doi: 10.1038/leu.2017.99
PMCID:
PMC5501321
ArticlePDF–472K
14.
Defining the Protein-Protein Interaction Network of the Human Protein Tyrosine Phosphatase Family
Xu Li, Kim My Tran, Kathryn E. Aziz, Alexey V. Sorokin, Junjie Chen, Wenqi Wang
Mol Cell Proteomics. 2016 Sep; 15(9): 3030–3044. Published online 2016 Jul 18. doi: 10.1074/mcp.M116.060277
PMCID:
PMC5013315
AbstractArticlePDF–3.2M
15.
hNUDT16: a universal decapping enzyme for small nucleolar RNA and cytoplasmic mRNA
Guangwen Lu, Jie Zhang, Yan Li, Zhixin Li, Na Zhang, Xiang Xu, Tingting Wang, Zhenhong Guan, George F. Gao, Jinghua Yan
Protein Cell. 2011 Jan; 2(1): 64–73. Published online 2011 Feb 20. doi: 10.1007/s13238-011-1009-2
PMCID:
PMC4875290
AbstractArticlePDF–1.1M
16.
Structural Basis for the Specificity of Human NUDT16 and Its Regulation by Inosine Monophosphate
Lionel Trésaugues, Thomas Lundbäck, Martin Welin, Susanne Flodin, Tomas Nyman, Camilla Silvander, Susanne Gräslund, Pär Nordlund
PLoS One. 2015; 10(6): e0131507. Published online 2015 Jun 29. doi: 10.1371/journal.pone.0131507
PMCID:
PMC4485890
AbstractArticlePDF–6.7M
17.
Virus-induced translational arrest through 4EBP1/2-dependent decay of 5′-TOP mRNAs restricts viral infection
Kaycie C. Hopkins, Michael A. Tartell, Christin Herrmann, Brent A. Hackett, Frances Taschuk, Debasis Panda, Sanjay V. Menghani, Leah R. Sabin, Sara Cherry
Proc Natl Acad Sci U S A. 2015 Jun 2; 112(22): E2920–E2929. Published online 2015 May 18. doi: 10.1073/pnas.1418805112
PMCID:
PMC4460451
AbstractArticlePDF–1.0M
18.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
19.
Multiple mRNA Decapping Enzymes in Mammalian Cells
Man-Gen Song, You Li, Megerditch Kiledjian
Mol Cell. Author manuscript; available in PMC 2011 Nov 12.
Published in final edited form as: Mol Cell. 2010 Nov 12; 40(3): 423–432. doi: 10.1016/j.molcel.2010.10.010
PMCID:
PMC2982215
AbstractArticlePDF–1.0M
20.
NUDT16 is a (deoxy)inosine diphosphatase, and its deficiency induces accumulation of single-strand breaks in nuclear DNA and growth arrest
Teruaki Iyama, Nona Abolhassani, Daisuke Tsuchimoto, Mari Nonaka, Yusaku Nakabeppu
Nucleic Acids Res. 2010 Aug; 38(14): 4834–4843. Published online 2010 Apr 12. doi: 10.1093/nar/gkq249
PMCID:
PMC2919730
AbstractArticlePDF–4.6M

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