PMC Links for GEO Profiles (Select 131966384) - PMC

Select item 81650301.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 79535922.

The E3 ligases Spsb1 and Spsb4 regulate RevErbα degradation and circadian period.

Tsedey Mekbib, Ting-Chung Suen, Aisha Rollins-Hairston, Jason P. DeBruyne

J Biol Rhythms. Author manuscript; available in PMC 2021 Mar 12.

Published in final edited form as: J Biol Rhythms. 2019 Dec; 34(6): 610–621. Published online 2019 Oct 14. doi: 10.1177/0748730419878036

PMCID:: PMC7953592

Abstract Article PDF–1.1M

Select item 73220673.

RIG-I regulates myeloid differentiation by promoting TRIM25-mediated ISGylation

Song-Fang Wu, Li Xia, Xiao-Dong Shi, Yu-Jun Dai, Wei-Na Zhang, Jun-Mei Zhao, Wu Zhang, Xiang-Qin Weng, Jing Lu, Huang-Ying Le, Sheng-ce Tao, Jiang Zhu, Zhu Chen, Yue-Ying Wang, Saijuan Chen

Proc Natl Acad Sci U S A. 2020 Jun 23; 117(25): 14395–14404. Published online 2020 Jun 8. doi: 10.1073/pnas.1918596117

PMCID:: PMC7322067

Abstract Article PDF–2.7M

Select item 56837634.

Ubiquitin ligase SPSB4 diminishes cell repulsive responses mediated by EphB2

Fumihiko Okumura, Akiko Joo-Okumura, Keisuke Obara, Alexander Petersen, Akihiko Nishikimi, Yoshinori Fukui, Kunio Nakatsukasa, Takumi Kamura

Mol Biol Cell. 2017 Nov 15; 28(24): 3532–3541. doi: 10.1091/mbc.E17-07-0450

PMCID:: PMC5683763

Abstract Article PDF–2.5M

Select item 55316115.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 46035196.

Ubiquitin ligase Siah2 regulates RevErbα degradation and the mammalian circadian clock

Jason P. DeBruyne, Julie E. Baggs, Trey K. Sato, John B. Hogenesch

Proc Natl Acad Sci U S A. 2015 Oct 6; 112(40): 12420–12425. Published online 2015 Sep 21. doi: 10.1073/pnas.1501204112

PMCID:: PMC4603519

Abstract Article PDF–936K

Select item 41121027.

Shared genetic susceptibility to ischemic stroke and coronary artery disease – a genome-wide analysis of common variants

Martin Dichgans, Rainer Malik, Inke R. König, Jonathan Rosand, Robert Clarke, Solveig Gretarsdottir, Gudmar Thorleifsson, Braxton D. Mitchell, Themistocles L. Assimes, Christopher Levi, Christopher J. O′Donnell, Myriam Fornage, Unnur Thorsteinsdottir, Bruce M. Psaty, Christian Hengstenberg, Sudha Seshadri, Jeanette Erdmann, Joshua C. Bis, Annette Peters, Giorgio B. Boncoraglio, Winfried März, James F. Meschia, Sekar Kathiresan, M. Arfan Ikram, Ruth McPherson, Kari Stefansson, Cathie Sudlow, Muredach P. Reilly, John R. Thompson, Pankaj Sharma, Jemma C. Hopewell, John C. Chambers, Hugh Watkins, Peter M. Rothwell, Robert Roberts, the METASTROKE Consortium, the CARDIoGRAM consortium, the C4D consortium, the International Stroke Genetics Consortium, Hugh S. Markus, Nilesh J. Samani, Martin Farrall, Heribert Schunkert

Stroke. Author manuscript; available in PMC 2015 Jan 1.

Published in final edited form as: Stroke. 2014 Jan; 45(1): 24–36. Published online 2013 Nov 21. doi: 10.1161/STROKEAHA.113.002707

PMCID:: PMC4112102

Abstract Article PDF–979K

Select item 34903348.

Genetic risk factors for ischaemic stroke and its subtypes (the METASTROKE Collaboration): a meta-analysis of genome-wide association studies

Matthew Traylor, Martin Farrall, Elizabeth G Holliday, Cathie Sudlow, Jemma C Hopewell, Yu-Ching Cheng, Myriam Fornage, M Arfan Ikram, Rainer Malik, Steve Bevan, Unnur Thorsteinsdottir, Mike A Nalls, WT Longstreth, Kerri L Wiggins, Sunaina Yadav, Eugenio A Parati, Anita L DeStefano, Bradford B Worrall, Steven J Kittner, Muhammad Saleem Khan, Alex P Reiner, Anna Helgadottir, Sefanja Achterberg, Israel Fernandez-Cadenas, Sherine Abboud, Reinhold Schmidt, Matthew Walters, Wei-Min Chen, E Bernd Ringelstein, Martin O'Donnell, Weang Kee Ho, Joanna Pera, Robin Lemmens, Bo Norrving, Peter Higgins, Marianne Benn, Michele Sale, Gregor Kuhlenbäumer, Alexander S F Doney, Astrid M Vicente, Hossein Delavaran, Ale Algra, Gail Davies, Sofia A Oliveira, Colin N A Palmer, Ian Deary, Helena Schmidt, Massimo Pandolfo, Joan Montaner, Cara Carty, Paul I W de Bakker, Konstantinos Kostulas, Jose M Ferro, Natalie R van Zuydam, Einar Valdimarsson, Børge G Nordestgaard, Arne Lindgren, Vincent Thijs, Agnieszka Slowik, Danish Saleheen, Guillaume Paré, Klaus Berger, Gudmar Thorleifsson, The Australian Stroke Genetics Collaborative, Wellcome Trust Case Control Consortium 2 (WTCCC2), Albert Hofman, Thomas H Mosley, Braxton D Mitchell, Karen Furie, Robert Clarke, Christopher Levi, Sudha Seshadri, Andreas Gschwendtner, Giorgio B Boncoraglio, Pankaj Sharma, Joshua C Bis, Solveig Gretarsdottir, Bruce M Psaty, Peter M Rothwell, Jonathan Rosand, James F Meschia, Kari Stefansson, Martin Dichgans, Hugh S Markus, , on behalf of the International Stroke Genetics Consortium

Lancet Neurol. 2012 Nov; 11(11): 951–962. doi: 10.1016/S1474-4422(12)70234-X

Correction in:: Lancet Neurol. 2015 Aug; 14(8): 788.

PMCID:: PMC3490334

Abstract Article

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 305898910.

Regulation of Inducible Nitric-oxide Synthase by the SPRY Domain- and SOCS Box-containing Proteins

Tadashi Nishiya, Kazuma Matsumoto, Satoshi Maekawa, Emi Kajita, Takahiro Horinouchi, Masahiro Fujimuro, Kouetsu Ogasawara, Takashi Uehara, Soichi Miwa

J Biol Chem. 2011 Mar 18; 286(11): 9009–9019. Published online 2011 Jan 3. doi: 10.1074/jbc.M110.190678

PMCID:: PMC3058989

Abstract Article PDF–3.1M

Select item 292377811.

Structural Basis for Par-4 Recognition by the SPRY Domain- and SOCS Box-Containing Proteins SPSB1, SPSB2, and SPSB4

Panagis Filippakopoulos, Andrew Low, Timothy D. Sharpe, Jonas Uppenberg, Shenggen Yao, Zhihe Kuang, Pavel Savitsky, Rowena S. Lewis, Sandra E. Nicholson, Raymond S. Norton, Alex N. Bullock

J Mol Biol. 2010 Aug 20; 401(3-2): 389–402. doi: 10.1016/j.jmb.2010.06.017

PMCID:: PMC2923778

Abstract Article

Select item 291166512.

The SPRY domain–containing SOCS box protein SPSB2 targets iNOS for proteasomal degradation

Zhihe Kuang, Rowena S. Lewis, Joan M. Curtis, Yifan Zhan, Bernadette M. Saunders, Jeffrey J. Babon, Tatiana B. Kolesnik, Andrew Low, Seth L. Masters, Tracy A. Willson, Lukasz Kedzierski, Shenggen Yao, Emanuela Handman, Raymond S. Norton, Sandra E. Nicholson

J Cell Biol. 2010 Jul 12; 190(1): 129–141. doi: 10.1083/jcb.200912087