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Select item 83641811.

Protein interaction landscapes revealed by advanced in vivo cross-linking–mass spectrometry

Andrew Wheat, Clinton Yu, Xiaorong Wang, Anthony M. Burke, Ilan E. Chemmama, Robyn M. Kaake, Peter Baker, Scott D. Rychnovsky, Jing Yang, Lan Huang

Proc Natl Acad Sci U S A. 2021 Aug 10; 118(32): e2023360118. Published online 2021 Aug 4. doi: 10.1073/pnas.2023360118

PMCID:: PMC8364181

Abstract Article PDF–3.0M

Select item 82501312.

Host PDZ‐containing proteins targeted by SARS‐CoV‐2

Célia Caillet‐Saguy, Fabien Durbesson, Veronica V. Rezelj, Gergö Gogl, Quang Dinh Tran, Jean‐Claude Twizere, Marco Vignuzzi, Renaud Vincentelli, Nicolas Wolff

FEBS J. 2021 Sep; 288(17): 5148–5162. Published online 2021 May 1. doi: 10.1111/febs.15881

PMCID:: PMC8250131

Abstract Article PDF–1.4M

Select item 68318513.

Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis

Mohamed Taha Moutaoufik, Ramy Malty, Shahreen Amin, Qingzhou Zhang, Sadhna Phanse, Alla Gagarinova, Mara Zilocchi, Larissa Hoell, Zoran Minic, Maria Gagarinova, Hiroyuki Aoki, Jocelyn Stockwell, Matthew Jessulat, Florian Goebels, Kirsten Broderick, Nichollas E. Scott, James Vlasblom, Gabriel Musso, Bhanu Prasad, Eleonora Lamantea, Barbara Garavaglia, Alex Rajput, Kei Murayama, Yasushi Okazaki, Leonard J. Foster, Gary D. Bader, Francisco S. Cayabyab, Mohan Babu

iScience. 2019 Sep 27; 19: 1114–1132. Published online 2019 Sep 4. doi: 10.1016/j.isci.2019.08.057

PMCID:: PMC6831851

Abstract Article PDF–9.8M

Select item 67781374.

The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis

Luisa Capalbo, Zuni I. Bassi, Marco Geymonat, Sofia Todesca, Liviu Copoiu, Anton J. Enright, Giuliano Callaini, Maria Giovanna Riparbelli, Lu Yu, Jyoti S. Choudhary, Enrico Ferrero, Sally Wheatley, Max E. Douglas, Masanori Mishima, Pier Paolo D’Avino

Nat Commun. 2019; 10: 4513. Published online 2019 Oct 4. doi: 10.1038/s41467-019-12507-9

PMCID:: PMC6778137

Abstract Article PDF–7.8M

Select item 64481235.

miR-363 acts as a tumor suppressor in osteosarcoma cells by inhibiting PDZD2

Fan He, Long Fang, Qingshui Yin

Oncol Rep. 2019 May; 41(5): 2729–2738. Published online 2019 Mar 19. doi: 10.3892/or.2019.7078

PMCID:: PMC6448123

Abstract Article PDF–1.2M

Select item 58269266.

VIRMA mediates preferential m⁶A mRNA methylation in 3′UTR and near stop codon and associates with alternative polyadenylation

Yanan Yue, Jun Liu, Xiaolong Cui, Jie Cao, Guanzheng Luo, Zezhou Zhang, Tao Cheng, Minsong Gao, Xiao Shu, Honghui Ma, Fengqin Wang, Xinxia Wang, Bin Shen, Yizhen Wang, Xinhua Feng, Chuan He, Jianzhao Liu

Cell Discov. 2018; 4: 10. Published online 2018 Feb 27. doi: 10.1038/s41421-018-0019-0

PMCID:: PMC5826926

Abstract Article PDF–2.3M

Select item 54952257.

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing

Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown

Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114

PMCID:: PMC5495225

Abstract Article PDF–1.3M

Select item 54218398.

Germline genetic variations in PDZD2 and ITPR2 genes are associated with clear cell renal cell carcinoma in Chinese population

Ning Zhang, Yishuo Wu, Jian Gong, Kaiwen Li, Xiaolin Lin, Haitao Chen, Yang Yu, Yuancheng Gou, Jiangang Hou, Deke Jiang, Rong Na, Xiang Wang, Qiang Ding, Jianfeng Xu

Oncotarget. 2017 Apr 11; 8(15): 24196–24201. Published online 2016 Jan 14. doi: 10.18632/oncotarget.6917

PMCID:: PMC5421839

Abstract Article PDF–1.0M

Select item 48318739.

An improved smaller biotin ligase for BioID proximity labeling

Dae In Kim, Samuel C. Jensen, Kyle A. Noble, Birendra KC, Kenneth H. Roux, Khatereh Motamedchaboki, Kyle J. Roux

Mol Biol Cell. 2016 Apr 15; 27(8): 1188–1196. doi: 10.1091/mbc.E15-12-0844

PMCID:: PMC4831873

Abstract Article PDF–2.1M

Select item 476262210.

Relevance Rank Platform (RRP) for Functional Filtering of High Content Protein–Protein Interaction Data

Yuba Raj Pokharel, Jani Saarela, Agnieszka Szwajda, Christian Rupp, Anne Rokka, Shibendra Kumar Lal Karna, Kaisa Teittinen, Garry Corthals, Olli Kallioniemi, Krister Wennerberg, Tero Aittokallio, Jukka Westermarck

Mol Cell Proteomics. 2015 Dec; 14(12): 3274–3283. Published online 2015 Oct 23. doi: 10.1074/mcp.M115.050773

PMCID:: PMC4762622

Abstract Article PDF–1.4M

Select item 428518211.

Structural Genomic Variation as Risk Factor for Idiopathic Recurrent Miscarriage

Liina Nagirnaja, Priit Palta, Laura Kasak, Kristiina Rull, Ole B Christiansen, Henriette S Nielsen, Rudi Steffensen, Tõnu Esko, Maido Remm, Maris Laan

Hum Mutat. 2014 Aug; 35(8): 972–982. Published online 2014 Jun 24. doi: 10.1002/humu.22589

PMCID:: PMC4285182

Abstract Article PDF–775K

Select item 413782912.

Citalopram and escitalopram plasma drug and metabolite concentrations: genome-wide associations

Yuan Ji, Daniel J Schaid, Zeruesenay Desta, Michiaki Kubo, Anthony J Batzler, Karen Snyder, Taisei Mushiroda, Naoyuki Kamatani, Evan Ogburn, Daniel Hall-Flavin, David Flockhart, Yusuke Nakamura, David A Mrazek, Richard M Weinshilboum

Br J Clin Pharmacol. 2014 Aug; 78(2): 373–383. Published online 2014 Feb 17. doi: 10.1111/bcp.12348

PMCID:: PMC4137829

Abstract Article PDF–1.6M

Select item 406652313.

Probing nuclear pore complex architecture with proximity-dependent biotinylation

Dae In Kim, Birendra KC, Wenhong Zhu, Khatereh Motamedchaboki, Valérie Doye, Kyle J. Roux

Proc Natl Acad Sci U S A. 2014 Jun 17; 111(24): E2453–E2461. Published online 2014 Jun 3. doi: 10.1073/pnas.1406459111

PMCID:: PMC4066523

Abstract Article PDF–1.6M

Select item 382931614.

Brain-specific Angiogenesis Inhibitor-1 Signaling, Regulation, and Enrichment in the Postsynaptic Density

Jason R. Stephenson, Kevin J. Paavola, Stacy A. Schaefer, Balveen Kaur, Erwin G. Van Meir, Randy A. Hall

J Biol Chem. 2013 Aug 2; 288(31): 22248–22256. Published online 2013 Jun 19. doi: 10.1074/jbc.M113.489757

PMCID:: PMC3829316

Abstract Article PDF–1.6M

Select item 355420515.

Common variation at 2q22.3 (ZEB2) influences the risk of renal cancer

Marc Henrion, Matthew Frampton, Ghislaine Scelo, Mark Purdue, Yuanqing Ye, Peter Broderick, Alastair Ritchie, Richard Kaplan, Angela Meade, James McKay, Mattias Johansson, Mark Lathrop, James Larkin, Nathaniel Rothman, Zhaoming Wang, Wong-Ho Chow, Victoria L. Stevens, W. Ryan Diver, Susan M. Gapstur, Demetrius Albanes, Jarmo Virtamo, Xifeng Wu, Paul Brennan, Stephen Chanock, Timothy Eisen, Richard S. Houlston

Hum Mol Genet. 2013 Feb 15; 22(4): 825–831. Published online 2012 Nov 25. doi: 10.1093/hmg/dds489

PMCID:: PMC3554205

Abstract Article PDF–143K

Select item 352258716.

Novel Genetic Loci Identified for the Pathophysiology of Childhood Obesity in the Hispanic Population

Anthony G. Comuzzie, Shelley A. Cole, Sandra L. Laston, V. Saroja Voruganti, Karin Haack, Richard A. Gibbs, Nancy F. Butte

PLoS One. 2012; 7(12): e51954. Published online 2012 Dec 14. doi: 10.1371/journal.pone.0051954

PMCID:: PMC3522587

Abstract Article PDF–130K

Select item 308450817.

Genome-Wide Association Study of Genetic Predictors of Anti–Tumor Necrosis Factor Treatment Efficacy in Rheumatoid Arthritis Identifies Associations with Polymorphisms at Seven Loci

Darren Plant, John Bowes, Catherine Potter, Kimme L Hyrich, Ann W Morgan, Anthony G Wilson, John D Isaacs, Anne Barton, Wellcome Trust Case Control Consortium, the British Society for Rheumatology Biologics Register

Arthritis Rheum. 2011 Mar; 63(3): 645–653. doi: 10.1002/art.30130