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Items: 1 to 20 of 24

1.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
2.
ATG5 is required for B cell polarization and presentation of particulate antigens
Florent Arbogast, Johan Arnold, Philippe Hammann, Lauriane Kuhn, Johana Chicher, Diane Murera, Justine Weishaar, Sylviane Muller, Jean-Daniel Fauny, Frédéric Gros
Autophagy. 2019; 15(2): 280–294. Published online 2018 Sep 22. doi: 10.1080/15548627.2018.1516327
PMCID:
PMC6333460
AbstractArticlePDF–2.7M
3.
Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells
Sunyuan Zhang, Nicholas A. Williamson, Marie A. Bogoyevitch
Sci Data. 2018; 5: 180262. Published online 2018 Nov 20. doi: 10.1038/sdata.2018.262
PMCID:
PMC6244183
AbstractArticlePDF–753K
4.
Adhesion Regulating Molecule 1 Mediates HAP40 Overexpression-Induced Mitochondrial Defects
Zih-Ning Huang, Her Min Chung, Su-Chiung Fang, Lu-Shiun Her
Int J Biol Sci. 2017; 13(11): 1420–1437. Published online 2017 Nov 1. doi: 10.7150/ijbs.20742
PMCID:
PMC5715525
AbstractArticlePDF–1.8M
5.
Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function
Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang
Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626
PMCID:
PMC5381226
AbstractArticlePDF–1.4M
6.
RPN13/ADRM1 inhibitor reverses immunosuppression by myeloid-derived suppressor cells
Ruey-Shyang Soong, Ravi K. Anchoori, Benjamin Yang, Andrew Yang, Ssu-Hsueh Tseng, Liangmei He, Ya-Chea Tsai, Richard B.S. Roden, Chien-Fu Hung
Oncotarget. 2016 Oct 18; 7(42): 68489–68502. Published online 2016 Sep 17. doi: 10.18632/oncotarget.12095
PMCID:
PMC5340091
AbstractArticlePDF–1.7M
7.
Widespread and dynamic translational control of red blood cell development
Juan R. Alvarez-Dominguez, Xu Zhang, Wenqian Hu
Blood. 2017 Feb 2; 129(5): 619–629. Prepublished online 2016 Nov 29. doi: 10.1182/blood-2016-09-741835
PMCID:
PMC5290990
AbstractArticle
8.
Binding of SGTA to Rpn13 selectively modulates protein quality control
Pawel Leznicki, Jelena Korac-Prlic, Katarzyna Kliza, Koraljka Husnjak, Yvonne Nyathi, Ivan Dikic, Stephen High
J Cell Sci. 2015 Sep 1; 128(17): 3187–3196. doi: 10.1242/jcs.165209
PMCID:
PMC4582187
AbstractArticle
9.
Redundant Roles of Rpn10 and Rpn13 in Recognition of Ubiquitinated Proteins and Cellular Homeostasis
Jun Hamazaki, Shoshiro Hirayama, Shigeo Murata
PLoS Genet. 2015 Jul; 11(7): e1005401. Published online 2015 Jul 29. doi: 10.1371/journal.pgen.1005401
PMCID:
PMC4519129
AbstractArticlePDF–11M
10.
The E3 Ubiquitin Ligase Parkin Is Recruited to the 26 S Proteasome via the Proteasomal Ubiquitin Receptor Rpn13
Miguel A. Aguileta, Jelena Korac, Thomas M. Durcan, Jean-François Trempe, Michael Haber, Kalle Gehring, Suzanne Elsasser, Oliver Waidmann, Edward A. Fon, Koraljka Husnjak
J Biol Chem. 2015 Mar 20; 290(12): 7492–7505. Published online 2015 Feb 9. doi: 10.1074/jbc.M114.614925
PMCID:
PMC4367258
AbstractArticlePDF–3.5M
11.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
12.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
13.
Regulators of the Proteasome Pathway, Uch37 and Rpn13, Play Distinct Roles in Mouse Development
Amin Al-Shami, Kanchan G. Jhaver, Peter Vogel, Carrie Wilkins, Juliane Humphries, John J. Davis, Nianhua Xu, David G. Potter, Brenda Gerhardt, Robert Mullinax, Cynthia R. Shirley, Stephen J. Anderson, Tamas Oravecz
PLoS One. 2010; 5(10): e13654. Published online 2010 Oct 27. doi: 10.1371/journal.pone.0013654
PMCID:
PMC2965108
AbstractArticlePDF–1.1M
14.
Regulation of NF-κB activity and inducible nitric oxide synthase by regulatory particle non-ATPase subunit 13 (Rpn13)
Tuhina Mazumdar, F. Murat Gorgun, Youbao Sha, Alexey Tyryshkin, Shenyan Zeng, Rasmus Hartmann-Petersen, Jakob Ploug Jørgensen, Klavs B. Hendil, N. Tony Eissa
Proc Natl Acad Sci U S A. 2010 Aug 3; 107(31): 13854–13859. Published online 2010 Jul 15. doi: 10.1073/pnas.0913495107
PMCID:
PMC2922252
AbstractArticlePDF–606K
15.
PAC1 Gene Knockout Reveals an Essential Role of Chaperone-Mediated 20S Proteasome Biogenesis and Latent 20S Proteasomes in Cellular Homeostasis
Katsuhiro Sasaki, Jun Hamazaki, Masato Koike, Yuko Hirano, Masaaki Komatsu, Yasuo Uchiyama, Keiji Tanaka, Shigeo Murata
Mol Cell Biol. 2010 Aug; 30(15): 3864–3874. Published online 2010 May 24. doi: 10.1128/MCB.00216-10
PMCID:
PMC2916404
AbstractArticlePDF–3.9M
16.
Proteasome subunit Rpn13 is a novel ubiquitin receptor
Koraljka Husnjak, Suzanne Elsasser, Naixia Zhang, Xiang Chen, Leah Randles, Yuan Shi, Kay Hofmann, Kylie Walters, Daniel Finley, Ivan Dikic
Nature. Author manuscript; available in PMC 2010 Mar 16.
Published in final edited form as: Nature. 2008 May 22; 453(7194): 481–488. doi: 10.1038/nature06926
PMCID:
PMC2839886
AbstractArticlePDF–1.4M
17.
Ubiquitin docking at the proteasome via a novel PH domain interaction
Patrick Schreiner, Xiang Chen, Koraljka Husnjak, Leah Randles, Naixia Zhang, Suzanne Elsasser, Daniel Finley, Ivan Dikic, Kylie Walters, Michael Groll
Nature. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Nature. 2008 May 22; 453(7194): 548–552. doi: 10.1038/nature06924
PMCID:
PMC2825158
AbstractArticlePDF–1.3M
18.
Adrm1 interacts with Atp6v0d2 and regulates osteoclast differentiation
Taesoo Kim, Hyun-Il Ha, Nacksung Kim, Okju Yi, Seoung Hoon Lee, Yongwon Choi
Biochem Biophys Res Commun. Author manuscript; available in PMC 2010 Dec 18.
Published in final edited form as: Biochem Biophys Res Commun. 2009 Dec 18; 390(3): 585–590. Published online 2009 Oct 8. doi: 10.1016/j.bbrc.2009.10.010
PMCID:
PMC2788059
AbstractArticlePDF–1.3M
19.
hRpn13/ADRM1/GP110 is a novel proteasome subunit that binds the deubiquitinating enzyme, UCH37
Xiao-Bo Qiu, Song-Ying Ouyang, Chao-Jun Li, Shiying Miao, Linfang Wang, Alfred L Goldberg
EMBO J. 2006 Dec 13; 25(24): 5742–5753. Published online 2006 Nov 30. doi: 10.1038/sj.emboj.7601450
PMCID:
PMC1698896
AbstractArticlePDF–266K
20.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M

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