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Select item 107633631.

Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network

George Hunt, Roshan Vaid, Sergei Pirogov, Alexander Pfab, Christoph Ziegenhain, Rickard Sandberg, Johan Reimegård, Mattias Mannervik

Genome Biol. 2024; 25: 2. Published online 2024 Jan 2. doi: 10.1186/s13059-023-03135-0

PMCID:: PMC10763363

Abstract Article PDF–9.8M

Select item 101057362.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 96356443.

Enteric bacterial infection in Drosophila induces whole-body alterations in metabolic gene expression independently of the immune deficiency signaling pathway

Rujuta Deshpande, Byoungchun Lee, Savraj S Grewal

G3 (Bethesda) 2022 Nov; 12(11): jkac163. Published online 2022 Jul 4. doi: 10.1093/g3journal/jkac163

PMCID:: PMC9635644

Abstract Article PDF–2.2M

Select item 95868794.

Updates on ion and water transport by the Malpighian tubule

Julian A T Dow, Sue Ann Krause, Pawel Herzyk

Curr Opin Insect Sci. 2021 Oct; 47: 31–37. doi: 10.1016/j.cois.2021.02.018

PMCID:: PMC9586879

Abstract Article

Select item 95746425.

How two extraembryonic epithelia became one: serosa and amnion features and functions of Drosophila's amnioserosa

Urs Schmidt-Ott, Chun Wai Kwan

Philos Trans R Soc Lond B Biol Sci. December 5, 2022; 377(1865): 20210265. Published online October 17, 2022. doi: 10.1098/rstb.2021.0265

PMCID:: PMC9574642

Abstract Article PDF–1.6M

Select item 94748756.

Multiple parameters shape the 3D chromatin structure of single nuclei at the doc locus in Drosophila

Markus Götz, Olivier Messina, Sergio Espinola, Jean-Bernard Fiche, Marcelo Nollmann

Nat Commun. 2022; 13: 5375. Published online 2022 Sep 14. doi: 10.1038/s41467-022-32973-y

PMCID:: PMC9474875

Abstract Article PDF–3.8M

Select item 91043077.

The Tbx6 Transcription Factor Dorsocross Mediates Dpp Signaling to Regulate Drosophila Thorax Closure

Juan Lu, Yingjie Wang, Xiao Wang, Dan Wang, Gert O. Pflugfelder, Jie Shen

Int J Mol Sci. 2022 May; 23(9): 4543. Published online 2022 Apr 20. doi: 10.3390/ijms23094543

PMCID:: PMC9104307

Abstract Article PDF–4.9M

Select item 80350768.

Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning

Elizabeth Ing-Simmons, Roshan Vaid, Xin Yang Bing, Michael Levine, Mattias Mannervik, Juan M. Vaquerizas

Nat Genet. 2021; 53(4): 487–499. Published online 2021 Apr 1. doi: 10.1038/s41588-021-00799-x

PMCID:: PMC8035076

Abstract Article PDF–12M

Select item 77222059.

Akirin is critical for early tinman induction and subsequent formation of the heart in Drosophila melanogaster

Austin M. Howard, Hayley Milner, Madison Hupp, Courtney Willett, Kristina Palermino-Rowland, Scott J. Nowak

Dev Biol. Author manuscript; available in PMC 2022 Jan 1.

Published in final edited form as: Dev Biol. 2021 Jan 1; 469: 1–11. Published online 2020 Sep 17. doi: 10.1016/j.ydbio.2020.09.001

PMCID:: PMC7722205

Abstract Article PDF–1.7M

Select item 737009010.

Rounding up the Usual Suspects: Assessing Yorkie, AP-1, and Stat Coactivation in Tumorigenesis

Fisun Hamaratoglu, Mardelle Atkins

Int J Mol Sci. 2020 Jul; 21(13): 4580. Published online 2020 Jun 27. doi: 10.3390/ijms21134580

PMCID:: PMC7370090

Abstract Article PDF–10M

Select item 731374011.

Drosophila models of pathogenic copy-number variant genes show global and non-neuronal defects during development

Tanzeen Yusuff, Matthew Jensen, Sneha Yennawar, Lucilla Pizzo, Siddharth Karthikeyan, Dagny J. Gould, Avik Sarker, Erika Gedvilaite, Yurika Matsui, Janani Iyer, Zhi-Chun Lai, Santhosh Girirajan

PLoS Genet. 2020 Jun; 16(6): e1008792. Published online 2020 Jun 24. doi: 10.1371/journal.pgen.1008792

PMCID:: PMC7313740

Abstract Article PDF–5.4M

Select item 663497412.

Anterior CNS expansion driven by brain transcription factors

Jesús Rodriguez Curt, Behzad Yaghmaeian Salmani, Stefan Thor

eLife. 2019; 8: e45274. Published online 2019 Jul 4. doi: 10.7554/eLife.45274

PMCID:: PMC6634974

Abstract Article PDF–5.7M

Select item 648595613.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 623332314.

Integration of Drosophila and Human Genetics to understand Notch signaling related diseases

Jose L. Salazar, Shinya Yamamoto

Adv Exp Med Biol. Author manuscript; available in PMC 2018 Nov 13.

Published in final edited form as: Adv Exp Med Biol. 2018; 1066: 141–185. doi: 10.1007/978-3-319-89512-3_8

PMCID:: PMC6233323

Abstract Article PDF–2.0M

Select item 621161715.

Spatially varying cis-regulatory divergence in Drosophila embryos elucidates cis-regulatory logic

Peter A. Combs, Hunter B. Fraser

PLoS Genet. 2018 Nov; 14(11): e1007631. Published online 2018 Nov 1. doi: 10.1371/journal.pgen.1007631

PMCID:: PMC6211617

Abstract Article PDF–2.1M

Select item 617725716.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853