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    Links from GEO Profiles

    Items: 18

    1.
    Crystal Structure of the E1 Component of the Escherichia coli 2-Oxoglutarate Dehydrogenase Multienzyme Complex
    René A. W. Frank, Amanda J. Price, Fred D. Northrop, Richard N. Perham, Ben F. Luisi
    J Mol Biol. Author manuscript; available in PMC 2021 Jun 16.
    Published in final edited form as: J Mol Biol. 2007 May 4; 368(3): 639–51. Published online 2007 Feb 7. doi: 10.1016/j.jmb.2007.01.080
    PMCID:
    PMC7611002
    ArticlePDF–2.4M
    2.
    Off-Pathway, Oxygen-Dependent Thiamine Radical in the Krebs Cycle
    René A. W. Frank, Christopher W. M. Kay, Judy Hirst, Ben F. Luisi
    J Am Chem Soc. Author manuscript; available in PMC 2021 Jun 7.
    Published in final edited form as: J Am Chem Soc. 2008 Feb 6; 130(5): 1662–8. Published online 2008 Jan 10. doi: 10.1021/ja076468k
    PMCID:
    PMC7610923
    ArticlePDF–1.2M
    3.
    Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification
    Fan Liu, Philip Lössl, Richard Scheltema, Rosa Viner, Albert J. R. Heck
    Nat Commun. 2017; 8: 15473. Published online 2017 May 19. doi: 10.1038/ncomms15473
    PMCID:
    PMC5454533
    ArticlePDF–1.5M
    4.
    The binary protein-protein interaction landscape of Escherichia coli
    Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz
    Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.
    Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831
    PMCID:
    PMC4123855
    ArticlePDF–1.1M
    5.
    Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins
    Pingzhao Hu, Sarath Chandra Janga, Mohan Babu, J. Javier Díaz-Mejía, Gareth Butland, Wenhong Yang, Oxana Pogoutse, Xinghua Guo, Sadhna Phanse, Peter Wong, Shamanta Chandran, Constantine Christopoulos, Anaies Nazarians-Armavil, Negin Karimi Nasseri, Gabriel Musso, Mehrab Ali, Nazila Nazemof, Veronika Eroukova, Ashkan Golshani, Alberto Paccanaro, Jack F Greenblatt, Gabriel Moreno-Hagelsieb, Andrew Emili
    PLoS Biol. 2009 Apr; 7(4): e1000096. Published online 2009 Apr 28. doi: 10.1371/journal.pbio.1000096
    PMCID:
    PMC2672614
    Article
    6.
    Protein abundance profiling of the Escherichia coli cytosol
    Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
    BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
    PMCID:
    PMC2292177
    ArticlePDF–1.0M
    7.
    Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12
    Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui
    J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06
    PMCID:
    PMC1797309
    ArticlePDF–141K
    8.
    Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
    Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
    Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
    PMCID:
    PMC1681481
    ArticlePDF–141K
    9.
    Large-scale identification of protein–protein interaction of Escherichia coli K-12
    Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori
    Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806
    PMCID:
    PMC1457052
    ArticlePDF–536K
    10.
    Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
    Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
    Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
    PMCID:
    PMC1325200
    ArticlePDF–204K
    11.
    Lipoylation of the E2 components of the 2-oxo acid dehydrogenase multienzyme complexes of Escherichia coli.
    L C Packman, B Green, R N Perham
    Biochem J. 1991 Jul 1; 277(Pt 1): 153–158. doi: 10.1042/bj2770153
    PMCID:
    PMC1151204
    ArticlePDF–1.0M
    12.
    Limited proteolysis and sequence analysis of the 2-oxo acid dehydrogenase complexes from Escherichia coli. Cleavage sites and domains in the dihydrolipoamide acyltransferase components.
    L C Packman, R N Perham
    Biochem J. 1987 Mar 1; 242(2): 531–538. doi: 10.1042/bj2420531
    PMCID:
    PMC1147738
    ArticlePDF–1.5M
    13.
    Nucleotide sequence encoding the flavoprotein and hydrophobic subunits of the succinate dehydrogenase of Escherichia coli.
    D Wood, M G Darlison, R J Wilde, J R Guest
    Biochem J. 1984 Sep 1; 222(2): 519–534. doi: 10.1042/bj2220519
    PMCID:
    PMC1144207
    ArticlePDF–2.3M
    14.
    Overexpression and site-directed mutagenesis of the succinyl-CoA synthetase of Escherichia coli and nucleotide sequence of a gene (g30) that is adjacent to the suc operon.
    D Buck, J R Guest
    Biochem J. 1989 Jun 15; 260(3): 737–747. doi: 10.1042/bj2600737
    PMCID:
    PMC1138739
    ArticlePDF–2.1M
    15.
    Molecular cloning of four tricarboxylic acid cyclic genes of Escherichia coli.
    M E Spencer, J R Guest
    J Bacteriol. 1982 Aug; 151(2): 542–552. doi: 10.1128/jb.151.2.542-552.1982
    PMCID:
    PMC220294
    ArticlePDF–2.0M
    16.
    Nucleotide sequence of the gene for cytochrome b558 of the Bacillus subtilis succinate dehydrogenase complex.
    K Magnusson, M K Philips, J R Guest, L Rutberg
    J Bacteriol. 1986 Jun; 166(3): 1067–1071. doi: 10.1128/jb.166.3.1067-1071.1986
    PMCID:
    PMC215233
    ArticlePDF–839K
    17.
    pH-Dependent Expression of Periplasmic Proteins and Amino Acid Catabolism in Escherichia coli
    Lauren M. Stancik, Dawn M. Stancik, Brian Schmidt, D. Michael Barnhart, Yuliya N. Yoncheva, Joan L. Slonczewski
    J Bacteriol. 2002 Aug; 184(15): 4246–4258. doi: 10.1128/JB.184.15.4246-4258.2002
    PMCID:
    PMC135203
    ArticlePDF–2.4M
    18.
    Acetate and Formate Stress: Opposite Responses in the Proteome of Escherichia coli
    Christopher Kirkpatrick, Lisa M. Maurer, Nikki E. Oyelakin, Yuliya N. Yoncheva, Russell Maurer, Joan L. Slonczewski
    J Bacteriol. 2001 Nov; 183(21): 6466–6477. doi: 10.1128/JB.183.21.6466-6477.2001
    PMCID:
    PMC100143
    ArticlePDF–2.8M

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