PMC Links for GEO Profiles (Select 14859893) - PMC

Links from GEO Profiles

Items: 1 to 20 of 33

<< First< Prev

Page of 2

Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102922103.

Nuclear pore complexes mediate subtelomeric gene silencing by regulating PCNA levels on chromatin

Sanjeev Kumar Choudhry, Maxwell L. Neal, Song Li, Arti T. Navare, Trevor Van Eeuwen, Richard W. Wozniak, Fred D. Mast, Michael P. Rout, John D. Aitchison

J Cell Biol. 2023 Sep 4; 222(9): e202207060. Published online 2023 Jun 26. doi: 10.1083/jcb.202207060

PMCID:: PMC10292210

Abstract Article PDF–5.9M

Select item 92098114.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 80273535.

Transcriptomic Changes Induced by Deletion of Transcriptional Regulator GCR2 on Pentose Sugar Metabolism in Saccharomyces cerevisiae

Minhye Shin, Heeyoung Park, Sooah Kim, Eun Joong Oh, Deokyeol Jeong, Clarissa Florencia, Kyoung Heon Kim, Yong-Su Jin, Soo Rin Kim

Front Bioeng Biotechnol. 2021; 9: 654177. Published online 2021 Mar 25. doi: 10.3389/fbioe.2021.654177

PMCID:: PMC8027353

Abstract Article PDF–1.3M

Select item 78794826.

Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes

Yeonji Chang, Gyubum Lim, Won-Ki Huh

J Cell Biol. 2021 Apr 5; 220(4): e201912060. Published online 2021 Feb 10. doi: 10.1083/jcb.201912060

PMCID:: PMC7879482

Abstract Article PDF–5.9M

Select item 77187517.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 75602168.

AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering

Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann

EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117

PMCID:: PMC7560216

Abstract Article PDF–3.6M

Select item 73846549.

Metabolic engineering considerations for the heterologous expression of xylose-catabolic pathways in Saccharomyces cerevisiae

Deokyeol Jeong, Eun Joong Oh, Ja Kyong Ko, Ju-Ock Nam, Hee-Soo Park, Yong-Su Jin, Eun Jung Lee, Soo Rin Kim

PLoS One. 2020; 15(7): e0236294. Published online 2020 Jul 27. doi: 10.1371/journal.pone.0236294

PMCID:: PMC7384654

Abstract Article PDF–2.5M

Select item 678712310.

Systematic improvement of isobutanol production from d-xylose in engineered Saccharomyces cerevisiae

Peerada Promdonkoy, Wiparat Siripong, Joe James Downes, Sutipa Tanapongpipat, Weerawat Runguphan

AMB Express. 2019; 9: 160. Published online 2019 Oct 10. doi: 10.1186/s13568-019-0885-3

PMCID:: PMC6787123

Abstract Article PDF–1.8M

Select item 575387311.

Protein Moonlighting Revealed by Noncatalytic Phenotypes of Yeast Enzymes

Adriana Espinosa-Cantú, Diana Ascencio, Selene Herrera-Basurto, Jiewei Xu, Assen Roguev, Nevan J. Krogan, Alexander DeLuna

Genetics. 2018 Jan; 208(1): 419–431. Published online 2017 Nov 10. doi: 10.1534/genetics.117.300377

PMCID:: PMC5753873

Abstract Article PDF–1.5M

Select item 566188512.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 560025413.

The Genetic Landscape of a Cell

Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Sep 15.

Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823

PMCID:: PMC5600254

Abstract Article PDF–2.4M

Select item 516127814.

Chemo-Genetic Interactions Between Histone Modification and the Antiproliferation Drug AICAR Are Conserved in Yeast and Humans

Delphine Albrecht, Johanna Ceschin, Jim Dompierre, Florian Gueniot, Benoît Pinson, Bertrand Daignan-Fornier

Genetics. 2016 Dec; 204(4): 1447–1460. Published online 2016 Oct 4. doi: 10.1534/genetics.116.192518

PMCID:: PMC5161278

Abstract Article PDF–8.8M

Select item 471340315.

Disruption of PHO13 improves ethanol production via the xylose isomerase pathway

Takahiro Bamba, Tomohisa Hasunuma, Akihiko Kondo

AMB Express. 2016; 6: 4. Published online 2016 Jan 14. doi: 10.1186/s13568-015-0175-7

PMCID:: PMC4713403

Abstract Article PDF–1.1M

Select item 451312516.

Functional Diversity of Haloacid Dehalogenase Superfamily Phosphatases from Saccharomyces cerevisiae: BIOCHEMICAL, STRUCTURAL, AND EVOLUTIONARY INSIGHTS

Ekaterina Kuznetsova, Boguslaw Nocek, Greg Brown, Kira S. Makarova, Robert Flick, Yuri I. Wolf, Anna Khusnutdinova, Elena Evdokimova, Ke Jin, Kemin Tan, Andrew D. Hanson, Ghulam Hasnain, Rémi Zallot, Valérie de Crécy-Lagard, Mohan Babu, Alexei Savchenko, Andrzej Joachimiak, Aled M. Edwards, Eugene V. Koonin, Alexander F. Yakunin

J Biol Chem. 2015 Jul 24; 290(30): 18678–18698. Published online 2015 Jun 12. doi: 10.1074/jbc.M115.657916

PMCID:: PMC4513125

Abstract Article PDF–4.0M

Select item 432515817.

Deletion of PHO13, Encoding Haloacid Dehalogenase Type IIA Phosphatase, Results in Upregulation of the Pentose Phosphate Pathway in Saccharomyces cerevisiae

Soo Rin Kim, Haiqing Xu, Anastashia Lesmana, Uros Kuzmanovic, Matthew Au, Clarissa Florencia, Eun Joong Oh, Guochang Zhang, Kyoung Heon Kim, Yong-Su Jin

Appl Environ Microbiol. 2015 Mar; 81(5): 1601–1609. Prepublished online 2014 Dec 19. Published online 2015 Feb 10. doi: 10.1128/AEM.03474-14

PMCID:: PMC4325158

Abstract Article PDF–1.2M

Select item 414793718.

Systematic and evolutionary engineering of a xylose isomerase-based pathway in Saccharomyces cerevisiae for efficient conversion yields

Sun-Mi Lee, Taylor Jellison, Hal S Alper

Biotechnol Biofuels. 2014; 7: 122. Published online 2014 Aug 20. doi: 10.1186/s13068-014-0122-x

PMCID:: PMC4147937

Abstract Article PDF–370K

Select item 391461619.

Intergenic Transcriptional Interference Is Blocked by RNA Polymerase III Transcription Factor TFIIIB in Saccharomyces cerevisiae

Asawari Korde, Jessica M. Rosselot, David Donze

Genetics. 2014 Feb; 196(2): 427–438. Published online 2013 Dec 13. doi: 10.1534/genetics.113.160093

PMCID:: PMC3914616

Abstract Article PDF–1.7M

Select item 358261420.

Rational and Evolutionary Engineering Approaches Uncover a Small Set of Genetic Changes Efficient for Rapid Xylose Fermentation in Saccharomyces cerevisiae

Soo Rin Kim, Jeffrey M. Skerker, Wei Kang, Anastashia Lesmana, Na Wei, Adam P. Arkin, Yong-Su Jin

PLoS One. 2013; 8(2): e57048. Published online 2013 Feb 26. doi: 10.1371/journal.pone.0057048

PMCID:: PMC3582614

Abstract Article PDF–835K

PMC

Result Filters

Article attributes

Text availability

Publication date

Custom date range

Research Funder

Additional filters

Display Settings:

Send to:

Links from GEO Profiles

Items: 1 to 20 of 33

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity