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Select item 114465481.

The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay

Moran Kelbert, Antonio Jordán-Pla, Lola de Miguel-Jiménez, José García-Martínez, Michael Selitrennik, Adi Guterman, Noa Henig, Sander Granneman, José E Pérez-Ortín, Sebastián Chávez, Mordechai Choder

eLife. 2024; 12: RP90766. Published online 2024 Oct 2. doi: 10.7554/eLife.90766

PMCID:: PMC11446548

Abstract Article PDF–7.1M

Select item 113735162.

Mck1-mediated proteolysis of CENP-A prevents mislocalization of CENP-A for chromosomal stability in Saccharomyces cerevisiae

Tianyi Zhang, Wei-Chun Au, Kentaro Ohkuni, Roshan L Shrestha, Peter Kaiser, Munira A Basrai

Genetics. 2024 Sep; 228(1): iyae108. Published online 2024 Jul 10. doi: 10.1093/genetics/iyae108

PMCID:: PMC11373516

Abstract Article PDF–643K

Select item 113138663.

DNA polymerase δ subunit Pol32 binds histone H3-H4 and couples nucleosome assembly with Okazaki fragment processing

Guojun Shi, Chaoqi Yang, Jiale Wu, Yang Lei, Jiazhi Hu, Jianxun Feng, Qing Li

Sci Adv. 2024 Aug 9; 10(32): eado1739. Published online 2024 Aug 9. doi: 10.1126/sciadv.ado1739

PMCID:: PMC11313866

Abstract Article PDF–13M

Select item 111394784.

Dual engagement of the nucleosomal acidic patches is essential for deposition of histone H2A.Z by SWR1C

Alexander S Baier, Nathan Gioacchini, Priit Eek, Erik M Leith, Song Tan, Craig L Peterson

eLife. 2024; 13: RP94869. Published online 2024 May 29. doi: 10.7554/eLife.94869

PMCID:: PMC11139478

Abstract Article PDF–3.6M

Select item 111099585.

Defective transfer of parental histone decreases frequency of homologous recombination by increasing free histone pools in budding yeast

Srinivasu Karri, Yi Yang, Jiaqi Zhou, Quinn Dickinson, Jing Jia, Yuxin Huang, Zhiquan Wang, Haiyun Gan, Chuanhe Yu

Nucleic Acids Res. 2024 May 22; 52(9): 5138–5151. Published online 2024 Mar 30. doi: 10.1093/nar/gkae205

PMCID:: PMC11109958

Abstract Article PDF–1.8M

Select item 110980836.

DNA polymerase delta governs parental histone transfer to DNA replication lagging strand

Congcong Tian, Qin Zhang, Jing Jia, Jiaqi Zhou, Ziwei Zhang, Srinivasu Karri, Jiuhang Jiang, Quinn Dickinson, Yuan Yao, Xiaorong Tang, Yuxin Huang, Ting Guo, Ziwei He, Zheng Liu, Yuan Gao, Xinran Yang, Yuchun Wu, Kui Ming Chan, Daoqin Zhang, Junhong Han, Chuanhe Yu, Haiyun Gan

Proc Natl Acad Sci U S A. 2024 May 14; 121(20): e2400610121. Published online 2024 May 7. doi: 10.1073/pnas.2400610121

PMCID:: PMC11098083

Abstract Article PDF–1.6M

Select item 110241857.

The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis

Victor E. Cruz, Christine S. Weirich, Nagesh Peddada, Jan P. Erzberger

Nat Commun. 2024; 15: 3296. Published online 2024 Apr 17. doi: 10.1038/s41467-024-47616-7

PMCID:: PMC11024185

Abstract Article PDF–7.4M

Select item 108724778.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 108687279.

Adaptive preservation of orphan ribosomal proteins in chaperone-dispersed condensates

Asif Ali, Rania Garde, Olivia C. Schaffer, Jared A. M. Bard, Kabir Husain, Samantha Keyport Kik, Kathleen A. Davis, Sofia Luengo-Woods, Maya G. Igarashi, D. Allan Drummond, Allison H. Squires, David Pincus

Nat Cell Biol. Author manuscript; available in PMC 2024 Feb 15.

Published in final edited form as: Nat Cell Biol. 2023 Nov; 25(11): 1691–1703. Published online 2023 Oct 16. doi: 10.1038/s41556-023-01253-2

PMCID:: PMC10868727

Abstract Article PDF–7.0M

Select item 1084046910.

The 80^th Threonine Residue of Histone H3 Is Important for Maintaining HM Silencing in Saccharomyces cerevisiae

Soojin Yeom, Junsoo Oh, Donghyun Kim, Jung-Shin Lee

J Microbiol Biotechnol. 2024 Jan 28; 34(1): 39–46. Published online 2023 Nov 15. doi: 10.4014/jmb.2310.10031

PMCID:: PMC10840469

Abstract Article PDF–6.6M

Select item 1079885811.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 1076102412.

RNA Polymerase II Dependent Crosstalk between H4K16 Deacetylation and H3K56 Acetylation Promotes Transcription of Constitutively Expressed Genes

Preeti Khan, Priyabrata Singha, Ronita Nag Chaudhuri

Mol Cell Biol. 2023; 43(11): 596–610. Published online 2023 Nov 17. doi: 10.1080/10985549.2023.2270912

PMCID:: PMC10761024

Abstract Article PDF–1.3M

Select item 1070013813.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 1068172314.

The N-terminus of Spt16 anchors FACT to MCM2–7 for parental histone recycling

Xuezheng Wang, Yuantao Tang, Jiawei Xu, He Leng, Guojun Shi, Zaifeng Hu, Jiale Wu, Yuwen Xiu, Jianxun Feng, Qing Li

Nucleic Acids Res. 2023 Nov 27; 51(21): 11549–11567. Published online 2023 Oct 18. doi: 10.1093/nar/gkad846

PMCID:: PMC10681723

Abstract Article PDF–6.5M

Select item 1023336815.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 1022661916.

The SAGA HAT module is tethered by its SWIRM domain and modulates activity of the SAGA DUB module

Sara T. Haile, Sanim Rahman, James K. Fields, Benjamin C. Orsburn, Namandjé N. Bumpus, Cynthia Wolberger

Biochim Biophys Acta Gene Regul Mech. Author manuscript; available in PMC 2023 Jun 1.

Published in final edited form as: Biochim Biophys Acta Gene Regul Mech. 2023 Jun; 1866(2): 194929. Published online 2023 Mar 24. doi: 10.1016/j.bbagrm.2023.194929

PMCID:: PMC10226619

Abstract Article PDF–1.8M

Select item 999271217.

ATP synthase interactome analysis identifies a new subunit l as a modulator of permeability transition pore in yeast

Chiranjit Panja, Aneta Wiesyk, Katarzyna Niedźwiecka, Emilia Baranowska, Roza Kucharczyk

Sci Rep. 2023; 13: 3839. Published online 2023 Mar 7. doi: 10.1038/s41598-023-30966-5

PMCID:: PMC9992712

Abstract Article PDF–8.1M

Select item 998453218.

Genetic requirements for repair of lesions caused by single genomic ribonucleotides in S phase

Natalie Schindler, Matthias Tonn, Vanessa Kellner, Jia Jun Fung, Arianna Lockhart, Olga Vydzhak, Thomas Juretschke, Stefanie Möckel, Petra Beli, Anton Khmelinskii, Brian Luke

Nat Commun. 2023; 14: 1227. Published online 2023 Mar 3. doi: 10.1038/s41467-023-36866-6