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Items: 10

Select item 99768991.

Identification of a novel 5-aminomethyl-2-thiouridine methyltransferase in tRNA modification

Gyuhyeok Cho, Jangmin Lee, Jungwook Kim

Nucleic Acids Res. 2023 Feb 28; 51(4): 1971–1983. Published online 2023 Feb 10. doi: 10.1093/nar/gkad048

PMCID:: PMC9976899

Abstract Article PDF–4.3M

Select item 39367422.

The output of the tRNA modification pathways controlled by the Escherichia coli MnmEG and MnmC enzymes depends on the growth conditions and the tRNA species

Ismaïl Moukadiri, M.-José Garzón, Glenn R. Björk, M.-Eugenia Armengod

Nucleic Acids Res. 2014 Feb; 42(4): 2602–2623. Published online 2013 Nov 26. doi: 10.1093/nar/gkt1228

PMCID:: PMC3936742

Abstract Article PDF–1.1M

Select item 36483443.

Structural basis for hypermodification of the wobble uridine in tRNA by bifunctional enzyme MnmC

Jungwook Kim, Steven C Almo

BMC Struct Biol. 2013; 13: 5. Published online 2013 Apr 24. doi: 10.1186/1472-6807-13-5

PMCID:: PMC3648344

Abstract Article PDF–2.1M

Select item 31135824.

Assay of both activities of the bifunctional tRNA-modifying enzyme MnmC reveals a kinetic basis for selective full modification of cmnm⁵s²U to mnm⁵s²U

David Pearson, Thomas Carell

Nucleic Acids Res. 2011 Jun; 39(11): 4818–4826. Published online 2011 Feb 8. doi: 10.1093/nar/gkr071

PMCID:: PMC3113582

Abstract Article PDF–6.5M

Select item 26338705.

Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks

John P. Rooney, Ajish D. George, Ashish Patil, Ulrike Begley, Erin Bessette, Maria R. Zappala, Xin Huang, Douglas A. Conklin, Richard P. Cunningham, Thomas J. Begley

Genomics. Author manuscript; available in PMC 2010 Jan 1.

Published in final edited form as: Genomics. 2009 Jan; 93(1): 42–51. Published online 2008 Oct 16. doi: 10.1016/j.ygeno.2008.09.001

PMCID:: PMC2633870

Abstract Article PDF–1.9M

Select item 16814816.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 13706137.

Identification of a bifunctional enzyme MnmC involved in the biosynthesis of a hypermodified uridine in the wobble position of tRNA

JANUSZ M. BUJNICKI, YAMINA OUDJAMA, MARTINE ROOVERS, SYLWIA OWCZAREK, JOËL CAILLET, LOUIS DROOGMANS

RNA. 2004 Aug; 10(8): 1236–1242. doi: 10.1261/rna.7470904

PMCID:: PMC1370613

Abstract Article PDF–417K

Select item 13252008.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 2220529.

Escherichia coli mutants with defects in the biosynthesis of 5-methylaminomethyl-2-thio-uridine or 1-methylguanosine in their tRNA.

G R Björk, K Kjellin-Stråby

J Bacteriol. 1978 Feb; 133(2): 508–517. doi: 10.1128/jb.133.2.508-517.1978

PMCID:: PMC222052

Summary Page Browse PDF–2.1M

Select item 22205110.

General screening procedure for RNA modificationless mutants: isolation of Escherichia coli strains with specific defects in RNA methylation.

G R Björk, K Kjellin-Stråby

J Bacteriol. 1978 Feb; 133(2): 499–507. doi: 10.1128/jb.133.2.499-507.1978

PMCID:: PMC222051

Summary Page Browse PDF–1.5M

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