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Items: 1 to 20 of 40

1.
The YmgB-SpoT interaction triggers the stringent response in Escherichia coli
Paul Guiraud, Elsa Germain, Deborah Byrne, Etienne Maisonneuve
J Biol Chem. 2023 Dec; 299(12): 105429. Published online 2023 Nov 4. doi: 10.1016/j.jbc.2023.105429
PMCID:
PMC10704370
AbstractArticlePDF–1.8M
2.
YtfK activates the stringent response by triggering the alarmone synthetase SpoT in Escherichia coli
Elsa Germain, Paul Guiraud, Deborah Byrne, Badreddine Douzi, Meriem Djendli, Etienne Maisonneuve
Nat Commun. 2019; 10: 5763. Published online 2019 Dec 17. doi: 10.1038/s41467-019-13764-4
PMCID:
PMC6917717
AbstractArticlePDF–3.4M
3.
Rsd balances (p)ppGpp level by stimulating the hydrolase activity of SpoT during carbon source downshift in Escherichia coli
Jae-Woo Lee, Young-Ha Park, Yeong-Jae Seok
Proc Natl Acad Sci U S A. 2018 Jul 17; 115(29): E6845–E6854. Published online 2018 Jun 18. doi: 10.1073/pnas.1722514115
PMCID:
PMC6055147
AbstractArticlePDF–1.2M
4.
Stringent Response Regulators Contribute to Recovery from Glucose Phosphate Stress in Escherichia coli
Julie R. Kessler, Brandi L. Cobe, Gregory R. Richards
Appl Environ Microbiol. 2017 Dec 15; 83(24): e01636-17. Prepublished online 2017 Oct 6. Published online 2017 Dec 1. doi: 10.1128/AEM.01636-17
PMCID:
PMC5717215
AbstractArticlePDF–1.8M
5.
Systematic Production of Inactivating and Non-Inactivating Suppressor Mutations at the relA Locus That Compensate the Detrimental Effects of Complete spoT Loss and Affect Glycogen Content in Escherichia coli
Manuel Montero, Mehdi Rahimpour, Alejandro M. Viale, Goizeder Almagro, Gustavo Eydallin, Ángel Sevilla, Manuel Cánovas, Cristina Bernal, Ana Belén Lozano, Francisco José Muñoz, Edurne Baroja-Fernández, Abdellatif Bahaji, Hirotada Mori, Francisco M. Codoñer, Javier Pozueta-Romero
PLoS One. 2014; 9(9): e106938. Published online 2014 Sep 4. doi: 10.1371/journal.pone.0106938
PMCID:
PMC4154780
AbstractArticlePDF–1.2M
6.
The global, ppGpp-mediated stringent response to amino acid starvation in Escherichia coli
Matthew F. Traxler, Sean M. Summers, Huyen-Tran Nguyen, Vineetha M. Zacharia, Joel T. Smith, Tyrrell Conway
Mol Microbiol. Author manuscript; available in PMC 2013 Jul 23.
Published in final edited form as: Mol Microbiol. 2008 Jun; 68(5): 1128–1148. Published online 2008 Apr 22. doi: 10.1111/j.1365-2958.2008.06229.x
PMCID:
PMC3719176
AbstractArticlePDF–4.8M
7.
Direct regulation of Escherichia coli ribosomal protein promoters by the transcription factors ppGpp and DksA
Justin J. Lemke, Patricia Sanchez-Vazquez, Hector L. Burgos, Gina Hedberg, Wilma Ross, Richard L. Gourse
Proc Natl Acad Sci U S A. 2011 Apr 5; 108(14): 5712–5717. Published online 2011 Mar 14. doi: 10.1073/pnas.1019383108
PMCID:
PMC3078377
AbstractArticlePDF–982K
8.
DksA and ppGpp Directly Regulate Transcription of the Escherichia coli Flagellar Cascade
Justin J. Lemke, Tim Durfee, Richard L. Gourse
Mol Microbiol. Author manuscript; available in PMC 2010 Dec 1.
Published in final edited form as: Mol Microbiol. 2009 Dec; 74(6): 1368–1379. Published online 2009 Nov 2. doi: 10.1111/j.1365-2958.2009.06939.x
PMCID:
PMC2806482
AbstractArticlePDF–1.9M
9.
Growth Phase and (p)ppGpp Control of IraD, a Regulator of RpoS Stability, in Escherichia coli
Houra Merrikh, Alexander E. Ferrazzoli, Susan T. Lovett
J Bacteriol. 2009 Dec; 191(24): 7436–7446. Published online 2009 Oct 9. doi: 10.1128/JB.00412-09
PMCID:
PMC2786607
AbstractArticlePDF–1.4M
10.
Increased RNA polymerase availability directs resources towards growth at the expense of maintenance
Bertil Gummesson, Lisa U Magnusson, Martin Lovmar, Kristian Kvint, Örjan Persson, Manuel Ballesteros, Anne Farewell, Thomas Nyström
EMBO J. 2009 Aug 5; 28(15): 2209–2219. Published online 2009 Jul 2. doi: 10.1038/emboj.2009.181
PMCID:
PMC2726692
AbstractArticlePDF–534K
11.
Similar and Divergent Effects of ppGpp and DksA Deficiencies on Transcription in Escherichia coli
Anna Åberg, Jorge Fernández-Vázquez, Juan David Cabrer-Panes, Alex Sánchez, Carlos Balsalobre
J Bacteriol. 2009 May; 191(10): 3226–3236. Published online 2009 Feb 27. doi: 10.1128/JB.01410-08
PMCID:
PMC2687150
AbstractArticlePDF–1.7M
12.
The Significance of EXDD and RXKD Motif Conservation in Rel Proteins
Mathew Sajish, Sissy Kalayil, Sunil Kumar Verma, Vinay Kumar Nandicoori, Balaji Prakash
J Biol Chem. 2009 Apr 3; 284(14): 9115–9123. doi: 10.1074/jbc.M807187200
PMCID:
PMC2666561
AbstractArticlePDF–503K
13.
Bacteria Possessing Two RelA/SpoT-Like Proteins Have Evolved a Specific Stringent Response Involving the Acyl Carrier Protein-SpoT Interaction
Aurélia Battesti, Emmanuelle Bouveret
J Bacteriol. 2009 Jan; 191(2): 616–624. Published online 2008 Nov 7. doi: 10.1128/JB.01195-08
PMCID:
PMC2620808
AbstractArticlePDF–928K
14.
The genetic basis of parallel and divergent phenotypic responses in evolving populations of Escherichia coli
Elizabeth A Ostrowski, Robert J Woods, Richard E Lenski
Proc Biol Sci. 2008 Feb 7; 275(1632): 277–284. Published online 2007 Nov 21. doi: 10.1098/rspb.2007.1244
PMCID:
PMC2593719
AbstractArticlePDF–246K
15.
The Stringent Response and Cell Cycle Arrest in Escherichia coli
Daniel J. Ferullo, Susan T. Lovett
PLoS Genet. 2008 Dec; 4(12): e1000300. Published online 2008 Dec 12. doi: 10.1371/journal.pgen.1000300
PMCID:
PMC2586660
AbstractArticlePDF–1018K
16.
Synthetic growth phenotypes of E.coli lacking ppGpp and transketolase A (tktA) are due to ppGpp-mediated transcriptional regulation of tktB
Rajendran Harinarayanan, Helen Murphy, Michael Cashel
Mol Microbiol. Author manuscript; available in PMC 2008 Oct 6.
Published in final edited form as: Mol Microbiol. 2008 Aug; 69(4): 882–894. Published online 2008 Jun 4. doi: 10.1111/j.1365-2958.2008.06317.x
PMCID:
PMC2561915
AbstractArticlePDF–866K
17.
Group II Intron Protein Localization and Insertion Sites Are Affected by Polyphosphate
Junhua Zhao, Wei Niu, Jun Yao, Sabine Mohr, Edward M Marcotte, Alan M Lambowitz
PLoS Biol. 2008 Jun; 6(6): e150. Published online 2008 Jun 24. doi: 10.1371/journal.pbio.0060150
PMCID:
PMC2435150
AbstractArticlePDF–849K
18.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
19.
A Pathway and Genetic Factors Contributing to Elevated Gene Expression Noise in Stationary Phase
Nicholas J. Guido, Philina Lee, Xiao Wang, Timothy C. Elston, J. J. Collins
Biophys J. 2007 Dec 1; 93(11): L55–L57. Published online 2007 Sep 21. doi: 10.1529/biophysj.107.118687
PMCID:
PMC2084246
AbstractArticlePDF–170K
20.
G-Protein Control of the Ribosome-Associated Stress Response Protein SpoT
Mengxi Jiang, Susan M. Sullivan, Patrice K. Wout, Janine R. Maddock
J Bacteriol. 2007 Sep; 189(17): 6140–6147. Published online 2007 Jul 6. doi: 10.1128/JB.00315-07
PMCID:
PMC1951942
AbstractArticlePDF–243K

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