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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107988582.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107001383.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102977004.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

Abstract Article PDF–2.0M

Select item 98413315.

Retromer oligomerization drives SNX‐BAR coat assembly and membrane constriction

Navin Gopaldass, Maria Giovanna De Leo, Thibault Courtellemont, Vincent Mercier, Christin Bissig, Aurélien Roux, Andreas Mayer

EMBO J. 2023 Jan; 42(2): e112287. Published online 2023 Jan 16. doi: 10.15252/embj.2022112287

PMCID:: PMC9841331

Abstract Article PDF–3.4M

Select item 98363486.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 98099427.

Vacuole fragmentation depends on a novel Atg18-containing retromer-complex

Lisa Marquardt, Matthew Taylor, Florian Kramer, Kerstin Schmitt, Gerhard H. Braus, Oliver Valerius, Michael Thumm

Autophagy. 2023; 19(1): 278–295. Published online 2022 May 15. doi: 10.1080/15548627.2022.2072656

PMCID:: PMC9809942

Abstract Article PDF–5.1M

Select item 96309868.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 95071309.

The VINE complex is an endosomal VPS9-domain GEF and SNX-BAR coat

Shawn P Shortill, Mia S Frier, Ponthakorn Wongsangaroonsri, Michael Davey, Elizabeth Conibear

eLife. 2022; 11: e77035. Published online 2022 Aug 8. doi: 10.7554/eLife.77035

PMCID:: PMC9507130

Abstract Article PDF–6.1M

Select item 920981110.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 910861011.

CROP: a retromer‐PROPPIN complex mediating membrane fission in the endo‐lysosomal system

Thibault Courtellemont, Maria Giovanna De Leo, Navin Gopaldass, Andreas Mayer

EMBO J. 2022 May; 41(10): e109646. Published online 2022 Apr 25. doi: 10.15252/embj.2021109646

PMCID:: PMC9108610

Abstract Article PDF–8.1M

Select item 850496912.

A PX-BAR protein Mvp1/SNX8 and a dynamin-like GTPase Vps1 drive endosomal recycling

Sho W Suzuki, Akihiko Oishi, Nadia Nikulin, Jeff R Jorgensen, Matthew G Baile, Scott D Emr

eLife. 2021; 10: e69883. Published online 2021 Sep 15. doi: 10.7554/eLife.69883

PMCID:: PMC8504969

Abstract Article PDF–13M

Select item 812069413.

Elevating PI3P drives select downstream membrane trafficking pathways

Noah Steinfeld, Vikramjit Lahiri, Anna Morrison, Shree Padma Metur, Daniel J. Klionsky, Lois S. Weisman

Mol Biol Cell. 2021 Jan 15; 32(2): 143–156. doi: 10.1091/mbc.E20-03-0191

PMCID:: PMC8120694

Abstract Article PDF–3.3M

Select item 797065414.

Expression attenuation as a mechanism of robustness against gene duplication

Diana Ascencio, Guillaume Diss, Isabelle Gagnon-Arsenault, Alexandre K. Dubé, Alexander DeLuna, Christian R. Landry

Proc Natl Acad Sci U S A. 2021 Feb 9; 118(6): e2014345118. Published online 2021 Feb 1. doi: 10.1073/pnas.2014345118

PMCID:: PMC7970654

Abstract Article PDF–9.9M

Select item 787948215.

Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes

Yeonji Chang, Gyubum Lim, Won-Ki Huh

J Cell Biol. 2021 Apr 5; 220(4): e201912060. Published online 2021 Feb 10. doi: 10.1083/jcb.201912060

PMCID:: PMC7879482

Abstract Article PDF–5.9M

Select item 781719116.

The retromer is co-opted to deliver lipid enzymes for the biogenesis of lipid-enriched tombusviral replication organelles

Zhike Feng, Jun-ichi Inaba, Peter D. Nagy

Proc Natl Acad Sci U S A. 2021 Jan 5; 118(1): e2016066118. Published online 2020 Dec 29. doi: 10.1073/pnas.2016066118

PMCID:: PMC7817191

Abstract Article PDF–2.6M

Select item 756021617.

AP‐3 vesicle uncoating occurs after HOPS‐dependent vacuole tethering

Jannis Schoppe, Muriel Mari, Erdal Yavavli, Kathrin Auffarth, Margarita Cabrera, Stefan Walter, Florian Fröhlich, Christian Ungermann

EMBO J. 2020 Oct 15; 39(20): e105117. Published online 2020 Aug 25. doi: 10.15252/embj.2020105117

PMCID:: PMC7560216

Abstract Article PDF–3.6M

Select item 718596918.

Yeast synaptobrevin, Snc1, engages distinct routes of postendocytic recycling mediated by a sorting nexin, Rcy1-COPI, and retromer

Jordan T. Best, Peng Xu, Jack G. McGuire, Shannon N. Leahy, Todd R. Graham

Mol Biol Cell. 2020 Apr 15; 31(9): 944–962. doi: 10.1091/mbc.E19-05-0290

PMCID:: PMC7185969

Abstract Article PDF–4.0M

Select item 714572319.

Mammalian Retromer Is an Adaptable Scaffold for Cargo Sorting from Endosomes

Amy K. Kendall, Boyang Xie, Peng Xu, Jue Wang, Rodger Burcham, Meredith N. Frazier, Elad Binshtein, Hui Wei, Todd R. Graham, Terunaga Nakagawa, Lauren P. Jackson

Structure. Author manuscript; available in PMC 2020 Apr 10.

Published in final edited form as: Structure. 2020 Apr 7; 28(4): 393–405.e4. Published online 2020 Feb 5. doi: 10.1016/j.str.2020.01.009