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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105211373.

Checkpoint kinase interaction with DNA polymerase alpha regulates replication progression during stress

Andreas Hadjicharalambous, Alex J. Whale, Geylani Can, J. Mark Skehel, Jonathan M. Houseley, Philip Zegerman

Version 1. Wellcome Open Res. 2023; 8: 327. Published online 2023 Jul 26. doi: 10.12688/wellcomeopenres.19617.1

PMCID:: PMC10521137

Abstract Article PDF–4.0M

Select item 102922104.

Nuclear pore complexes mediate subtelomeric gene silencing by regulating PCNA levels on chromatin

Sanjeev Kumar Choudhry, Maxwell L. Neal, Song Li, Arti T. Navare, Trevor Van Eeuwen, Richard W. Wozniak, Fred D. Mast, Michael P. Rout, John D. Aitchison

J Cell Biol. 2023 Sep 4; 222(9): e202207060. Published online 2023 Jun 26. doi: 10.1083/jcb.202207060

PMCID:: PMC10292210

Abstract Article PDF–5.9M

Select item 100916615.

Thermotolerance improvement of engineered Saccharomyces cerevisiae ERG5 Delta ERG4 Delta ERG3 Delta, molecular mechanism, and its application in corn ethanol production

Peizhou Yang, Wenjing Wu, Jianchao Chen, Suwei Jiang, Zhi Zheng, Yanhong Deng, Jiuling Lu, Hu Wang, Yong Zhou, Yuyou Geng, Kanglin Wang

Biotechnol Biofuels Bioprod. 2023; 16: 66. Published online 2023 Apr 12. doi: 10.1186/s13068-023-02312-4

PMCID:: PMC10091661

Abstract Article PDF–7.7M

Select item 96309866.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 93744367.

Ubiquitination drives COPI priming and Golgi SNARE localization

Swapneeta S Date, Peng Xu, Nathaniel L Hepowit, Nicholas S Diab, Jordan Best, Boyang Xie, Jiale Du, Eric R Strieter, Lauren P Jackson, Jason A MacGurn, Todd R Graham

eLife. 2022; 11: e80911. Published online 2022 Jul 29. doi: 10.7554/eLife.80911

PMCID:: PMC9374436

Abstract Article PDF–4.3M

Select item 92860238.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92098119.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 857691710.

Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis

Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.

J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155

PMCID:: PMC8576917

Abstract Article PDF–7.4M

Select item 850749211.

Set4 regulates stress response genes and coordinates histone deacetylases within yeast subtelomeres

Yogita Jethmalani, Khoa Tran, Maraki Y Negesse, Winny Sun, Mark Ramos, Deepika Jaiswal, Meagan Jezek, Shandon Amos, Eric Joshua Garcia, DoHwan Park, Erin M Green

Life Sci Alliance. 2021 Dec; 4(12): e202101126. Published online 2021 Oct 8. doi: 10.26508/lsa.202101126

PMCID:: PMC8507492

Abstract Article PDF–3.4M

Select item 846620712.

Role of Calcium/Calcineurin Signalling in Regulating Intracellular Reactive Oxygen Species Homeostasis in Saccharomyces cerevisiae

Guohui Li, Wenxuan Fu, Yu Deng, Yunying Zhao

Genes (Basel) 2021 Sep; 12(9): 1311. Published online 2021 Aug 25. doi: 10.3390/genes12091311

PMCID:: PMC8466207

Abstract Article PDF–16M

Select item 819177513.

FACT interacts with Set3 HDAC and fine-tunes GAL1 transcription in response to environmental stimulation

He Leng, Shaofeng Liu, Yang Lei, Yuantao Tang, Shijia Gu, Jiazhi Hu, She Chen, Jianxun Feng, Qing Li

Nucleic Acids Res. 2021 Jun 4; 49(10): 5502–5519. Published online 2021 May 8. doi: 10.1093/nar/gkab312

PMCID:: PMC8191775

Abstract Article PDF–3.0M

Select item 817562414.

Compartmentalized Reconstitution of Post-squalene Pathway for 7-Dehydrocholesterol Overproduction in Saccharomyces cerevisiae

Xiao-Jing Guo, Ming-Dong Yao, Wen-Hai Xiao, Ying Wang, Guang-Rong Zhao, Ying-Jin Yuan

Front Microbiol. 2021; 12: 663973. Published online 2021 May 21. doi: 10.3389/fmicb.2021.663973

PMCID:: PMC8175624

Abstract Article PDF–4.8M

Select item 805073215.

A yeast chemogenomic screen identifies pathways that modulate adipic acid toxicity

Eugene Fletcher, Kevin Mercurio, Elizabeth A. Walden, Kristin Baetz

iScience. 2021 Apr 23; 24(4): 102327. Published online 2021 Mar 18. doi: 10.1016/j.isci.2021.102327

PMCID:: PMC8050732

Abstract Article PDF–3.9M

Select item 802756716.

Deubiquitinase Ubp3 enhances the proteasomal degradation of key enzymes in sterol homeostasis

Qiuyan Lan, Yanchang Li, Fuqiang Wang, Zhaodi Li, Yuan Gao, Hui Lu, Yihao Wang, Zhenwen Zhao, Zixin Deng, Fuchu He, Junzhu Wu, Ping Xu

J Biol Chem. 2021 Jan-Jun; 296: 100348. Published online 2021 Jan 29. doi: 10.1016/j.jbc.2021.100348

PMCID:: PMC8027567

Abstract Article PDF–3.5M

Select item 766412217.

The Capture of a Disabled Proteasome Identifies Erg25 as a Substrate for Endoplasmic Reticulum Associated Degradation

Teresa M. Buck, Xuemei Zeng, Pamela S. Cantrell, Richard T. Cattley, Zikri Hasanbasri, Megan E. Yates, Diep Nguyen, Nathan A. Yates, Jeffrey L. Brodsky

Mol Cell Proteomics. 2020 Nov; 19(11): 1896–1909. Published online 2020 Aug 31. doi: 10.1074/mcp.RA120.002050