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Items: 1 to 20 of 39

1.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
2.
Structural basis of V-ATPase VO region assembly by Vma12p, 21p, and 22p
Hanlin Wang, Stephanie A. Bueler, John L. Rubinstein
Proc Natl Acad Sci U S A. 2023 Feb 7; 120(6): e2217181120. Published online 2023 Feb 1. doi: 10.1073/pnas.2217181120
PMCID:
PMC9963935
AbstractArticlePDF–4.4M
3.
A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast
Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger
G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296
PMCID:
PMC9836348
AbstractArticlePDF–857K
4.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
5.
Oxidative Stress Responses and Nutrient Starvation in MCHM Treated Saccharomyces cerevisiae
Michael C. Ayers, Zachary N. Sherman, Jennifer E. G. Gallagher
G3 (Bethesda) 2020 Dec; 10(12): 4665–4678. Published online 2020 Oct 27. doi: 10.1534/g3.120.401661
PMCID:
PMC7718757
AbstractArticlePDF–2.0M
6.
Membrane phospholipid alteration causes chronic ER stress through early degradation of homeostatic ER-resident proteins
Peter Shyu, Jr., Benjamin S. H. Ng, Nurulain Ho, Ruijie Chaw, Yi Ling Seah, Charlie Marvalim, Guillaume Thibault
Sci Rep. 2019; 9: 8637. Published online 2019 Jun 14. doi: 10.1038/s41598-019-45020-6
PMCID:
PMC6572771
AbstractArticlePDF–4.7M
7.
Effect of Sec61 interaction with Mpd1 on endoplasmic reticulum-associated degradation
Fabio Pereira, Mandy Rettel, Frank Stein, Mikhail M. Savitski, Ian Collinson, Karin Römisch
PLoS One. 2019; 14(1): e0211180. Published online 2019 Jan 25. doi: 10.1371/journal.pone.0211180
PMCID:
PMC6347170
AbstractArticlePDF–16M
8.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
9.
Histone Acetylation, Not Stoichiometry, Regulates Linker Histone Binding in Saccharomyces cerevisiae
Mackenzie B. D. Lawrence, Nicolas Coutin, Jennifer K. Choi, Benjamin J. E. Martin, Nicholas A. T. Irwin, Barry Young, Christopher Loewen, LeAnn J. Howe
Genetics. 2017 Sep; 207(1): 347–355. Published online 2017 Jul 26. doi: 10.1534/genetics.117.1132
PMCID:
PMC5586383
AbstractArticlePDF–1.4M
10.
Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets
John J. Shin, Qurratulain Aftab, Pamela Austin, Jennifer A. McQueen, Tak Poon, Shu Chen Li, Barry P. Young, Calvin D. Roskelley, Christopher J. R. Loewen
Dis Model Mech. 2016 Sep 1; 9(9): 1039–1049. doi: 10.1242/dmm.023374
PMCID:
PMC5047693
AbstractArticle
11.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
12.
Target of rapamycin signaling mediates vacuolar fission caused by endoplasmic reticulum stress in Saccharomyces cerevisiae
Bobbiejane Stauffer, Ted Powers
Mol Biol Cell. 2015 Dec 15; 26(25): 4618–4630. doi: 10.1091/mbc.E15-06-0344
PMCID:
PMC4678019
AbstractArticlePDF–1.8M
13.
RSC Chromatin-Remodeling Complex Is Important for Mitochondrial Function in Saccharomyces cerevisiae
Yuko Imamura, Feifei Yu, Misaki Nakamura, Yuhki Chihara, Kyo Okane, Masahiro Sato, Muneyoshi Kanai, Ryoko Hamada, Masaru Ueno, Masashi Yukawa, Eiko Tsuchiya
PLoS One. 2015; 10(6): e0130397. Published online 2015 Jun 18. doi: 10.1371/journal.pone.0130397
PMCID:
PMC4472808
AbstractArticlePDF–1.0M
14.
Lifespan Extension by Methionine Restriction Requires Autophagy-Dependent Vacuolar Acidification
Christoph Ruckenstuhl, Christine Netzberger, Iryna Entfellner, Didac Carmona-Gutierrez, Thomas Kickenweiz, Slaven Stekovic, Christina Gleixner, Christian Schmid, Lisa Klug, Alice G. Sorgo, Tobias Eisenberg, Sabrina Büttner, Guillermo Mariño, Rafal Koziel, Pidder Jansen-Dürr, Kai-Uwe Fröhlich, Guido Kroemer, Frank Madeo
PLoS Genet. 2014 May; 10(5): e1004347. Published online 2014 May 1. doi: 10.1371/journal.pgen.1004347
PMCID:
PMC4006742
AbstractArticlePDF–2.9M
15.
Endolysosomal Membrane Trafficking Complexes Drive Nutrient-Dependent TORC1 Signaling to Control Cell Growth in Saccharomyces cerevisiae
Joanne M. Kingsbury, Neelam D. Sen, Tatsuya Maeda, Joseph Heitman, Maria E. Cardenas
Genetics. 2014 Apr; 196(4): 1077–1089. Published online 2014 Feb 10. doi: 10.1534/genetics.114.161646
PMCID:
PMC3982701
AbstractArticlePDF–2.2M
16.
Global analysis of phosphorylation and ubiquitylation crosstalk in protein degradation
Danielle L. Swaney, Pedro Beltrao, Lea Starita, Ailan Guo, John Rush, Stanley Fields, Nevan J. Krogan, Judit Villén
Nat Methods. Author manuscript; available in PMC 2014 Jul 1.
Published in final edited form as: Nat Methods. 2013 Jul; 10(7): 10.1038/nmeth.2519. Published online 2013 Jun 9. doi: 10.1038/nmeth.2519
PMCID:
PMC3868471
AbstractArticlePDF–1.3M
17.
Perturbations to the Ubiquitin Conjugate Proteome in Yeast Δubx Mutants Identify Ubx2 as a Regulator of Membrane Lipid Composition
Natalie Kolawa, Michael J. Sweredoski, Robert L.J. Graham, Robert Oania, Sonja Hess, Raymond J. Deshaies
Mol Cell Proteomics. 2013 Oct; 12(10): 2791–2803. Published online 2013 Jun 22. doi: 10.1074/mcp.M113.030163
PMCID:
PMC3790291
AbstractArticlePDF–2.5M
18.
Ubiquitin conjugation triggers misfolded protein sequestration into quality control foci when Hsp70 chaperone levels are limiting
Ayala Shiber, William Breuer, Michael Brandeis, Tommer Ravid
Mol Biol Cell. 2013 Jul 1; 24(13): 2076–2087. doi: 10.1091/mbc.E13-01-0010
PMCID:
PMC3694792
AbstractArticlePDF–1.8M
19.
Placing a Disrupted Degradation Motif at the C Terminus of Proteasome Substrates Attenuates Degradation without Impairing Ubiquitylation
Omri S. Alfassy, Itamar Cohen, Yuval Reiss, Boaz Tirosh, Tommer Ravid
J Biol Chem. 2013 May 3; 288(18): 12645–12653. Published online 2013 Mar 21. doi: 10.1074/jbc.M113.453027
PMCID:
PMC3642311
AbstractArticlePDF–2.0M
20.
Identification of Genes Required for Protection from Doxorubicin by a Genome-Wide Screen in Saccharomyces cerevisiae
Ling Xia, Lahcen Jaafar, Anil Cashikar, Hernan Flores-Rozas
Cancer Res. Author manuscript; available in PMC 2013 Apr 25.
Published in final edited form as: Cancer Res. 2007 Dec 1; 67(23): 11411–11418. doi: 10.1158/0008-5472.CAN-07-2399
PMCID:
PMC3635107
AbstractArticlePDF–2.1M

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