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Select item 92098111.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 70083622.

The mitochondrial iron exporter genes MMT1 and MMT2 in yeast are transcriptionally regulated by Aft1 and Yap1

Liangtao Li, Sophie Bertram, Jerry Kaplan, Xuan Jia, Diane M. Ward

J Biol Chem. 2020 Feb 7; 295(6): 1716–1726. Published online 2020 Jan 2. doi: 10.1074/jbc.RA119.011154

PMCID:: PMC7008362

Abstract Article PDF–2.9M

Select item 67094513.

Genomewide Elucidation of Drug Resistance Mechanisms for Systemically Used Antifungal Drugs Amphotericin B, Caspofungin, and Voriconazole in the Budding Yeast

Cigdem Balkan, Ilkcan Ercan, Esin Isik, Esra Sahin Akdeniz, Orhan Balcioglu, Marie Kodedová, Olga Zimmermannová, Muhammed Dundar, Hana Sychrová, Ahmet Koc

Antimicrob Agents Chemother. 2019 Sep; 63(9): e02268-18. Prepublished online 2019 Jun 17. Published online 2019 Aug 23. doi: 10.1128/AAC.02268-18

PMCID:: PMC6709451

Abstract Article PDF–873K

Select item 64689964.

Recovery of mrs3Δmrs4Δ Saccharomyces cerevisiae Cells under Iron-Sufficient Conditions and the Role of Fe₅₈₀

Michael J. Moore, Joshua D. Wofford, Andrew Dancis, Paul A. Lindahl

Biochemistry. Author manuscript; available in PMC 2019 Apr 17.

Published in final edited form as: Biochemistry. 2018 Feb 6; 57(5): 672–683. Published online 2018 Jan 4. doi: 10.1021/acs.biochem.7b01034

PMCID:: PMC6468996

Abstract Article PDF–1.4M

Select item 57653595.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 56618856.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 56002547.

The Genetic Landscape of a Cell

Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Sep 15.

Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823

PMCID:: PMC5600254

Abstract Article PDF–2.4M

Select item 55551838.

Endoplasmic reticulum–mitochondria junction is required for iron homeostasis

Yong Xue, Stefan Schmollinger, Narsis Attar, Oscar A. Campos, Maria Vogelauer, Michael F. Carey, Sabeeha S. Merchant, Siavash K. Kurdistani

J Biol Chem. 2017 Aug 11; 292(32): 13197–13204. Published online 2017 Jun 21. doi: 10.1074/jbc.M117.784249

PMCID:: PMC5555183

Abstract Article PDF–496K

Select item 52043489.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 517994710.

Cancer-associated isocitrate dehydrogenase mutations induce mitochondrial DNA instability

Joanne M. Kingsbury, Nachiketha Shamaprasad, R. Blake Billmyre, Joseph Heitman, Maria E. Cardenas

Hum Mol Genet. 2016 Aug 15; 25(16): 3524–3538. Published online 2016 Jul 17. doi: 10.1093/hmg/ddw195

PMCID:: PMC5179947

Abstract Article PDF–1.0M

Select item 508652011.

Ribosome-Associated Mba1 Escorts Cox2 from Insertion Machinery to Maturing Assembly Intermediates

Isotta Lorenzi, Silke Oeljeklaus, Christin Ronsör, Bettina Bareth, Bettina Warscheid, Peter Rehling, Sven Dennerlein

Mol Cell Biol. 2016 Nov 15; 36(22): 2782–2793. Prepublished online 2016 Aug 22. Published online 2016 Oct 28. doi: 10.1128/MCB.00361-16

PMCID:: PMC5086520

Abstract Article PDF–2.4M

Select item 479212212.

Rim2, a pyrimidine nucleotide exchanger, is needed for iron utilization in mitochondria

Heeyong Yoon, Yan Zhang, Jayashree Pain, Elise R. Lyver, Emmanuel Lesuisse, Debkumar Pain, Andrew Dancis

Biochem J. Author manuscript; available in PMC 2016 Mar 15.

Published in final edited form as: Biochem J. 2011 Nov 15; 440(1): 137–146. doi: 10.1042/BJ20111036

PMCID:: PMC4792122

Abstract Article PDF–1.8M

Select item 473682713.

Overlap of copper and iron uptake systems in mitochondria in Saccharomyces cerevisiae

Katherine E. Vest, Jing Wang, Micah G. Gammon, Margaret K. Maynard, Olivia L. White, Jai A. Cobine, Wilkerson K. Mahone, Paul A. Cobine

Open Biol. 2016 Jan; 6(1): 150223. Published online 2016 Jan 13. doi: 10.1098/rsob.150223

PMCID:: PMC4736827

Abstract Article PDF–910K

Select item 461603914.

Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p

Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt

Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518