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Items: 1 to 20 of 69

1.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
2.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
3.
Efficient breeding of industrial brewing yeast strains using CRISPR/Cas9-aided mating-type switching
Kristoffer Krogerus, Eugene Fletcher, Nils Rettberg, Brian Gibson, Richard Preiss
Appl Microbiol Biotechnol. 2021; 105(21-22): 8359–8376. Published online 2021 Oct 13. doi: 10.1007/s00253-021-11626-y
PMCID:
PMC8557189
AbstractArticlePDF–4.6M
4.
Amn1 governs post-mitotic cell separation in Saccharomyces cerevisiae
Ou Fang, Xiaohua Hu, Lin Wang, Ning Jiang, Jixuan Yang, Bo Li, Zewei Luo
PLoS Genet. 2018 Oct; 14(10): e1007691. Published online 2018 Oct 1. doi: 10.1371/journal.pgen.1007691
PMCID:
PMC6181423
AbstractArticlePDF–7.5M
5.
DNA binding by the MATα2 transcription factor controls its access to alternative ubiquitin-modification pathways
Christopher M. Hickey, Yang Xie, Mark Hochstrasser
Mol Biol Cell. 2018 Mar 1; 29(5): 542–556. doi: 10.1091/mbc.E17-10-0589
PMCID:
PMC6004586
AbstractArticlePDF–1.9M
6.
Aggregation of an RNA-binding protein, not loss of heterochromatin, causes sterility of aging yeast cells
Gavin Schlissel, Marek K. Krzyzanowski, Fabrice Caudron, Yves Barral, Jasper Rine
Science. Author manuscript; available in PMC 2017 Dec 13.
Published in final edited form as: Science. 2017 Mar 17; 355(6330): 1184–1187. Published online 2017 Mar 16. doi: 10.1126/science.aaj2103
PMCID:
PMC5728107
AbstractArticlePDF–704K
7.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
8.
Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28
Christine Zimmermann, Ignacio Garcia, Manja Omerzu, Pierre Chymkowitch, Beibei Zhang, Jorrit M. Enserink
G3 (Bethesda) 2017 Jun; 7(6): 1753–1766. Published online 2017 Apr 18. doi: 10.1534/g3.117.042317
Correction in:
G3 (Bethesda). 2019 Aug; 9(8): 2787.
PMCID:
PMC5473755
AbstractArticlePDF–2.7M
9.
Functional Analysis of Kinases and Transcription Factors in Saccharomyces cerevisiae Using an Integrated Overexpression Library
Ji-Young Youn, Helena Friesen, Alex N. Nguyen Ba, Wendy Liang, Vincent Messier, Mike J. Cox, Alan M. Moses, Brenda Andrews
G3 (Bethesda) 2017 Mar; 7(3): 911–921. Published online 2017 Jan 22. doi: 10.1534/g3.116.038471
PMCID:
PMC5345721
AbstractArticlePDF–1.6M
10.
The interplay between chromosome stability and cell cycle control explored through gene–gene interaction and computational simulation
Jesse P. Frumkin, Biranchi N. Patra, Anthony Sevold, Kumkum Ganguly, Chaya Patel, Stephanie Yoon, Molly B. Schmid, Animesh Ray
Nucleic Acids Res. 2016 Sep 30; 44(17): 8073–8085. Published online 2016 Aug 16. doi: 10.1093/nar/gkw715
PMCID:
PMC5041493
AbstractArticlePDF–1.2M
11.
STUbL-mediated degradation of the transcription factor MATα2 requires degradation elements that coincide with corepressor binding sites
Christopher M. Hickey, Mark Hochstrasser
Mol Biol Cell. 2015 Oct 1; 26(19): 3401–3412. doi: 10.1091/mbc.E15-06-0436
PMCID:
PMC4591686
AbstractArticlePDF–1.0M
12.
On the Mechanism of Gene Silencing in Saccharomyces cerevisiae
David Lee Steakley, Jasper Rine
G3 (Bethesda) 2015 Aug; 5(8): 1751–1763. Published online 2015 Jun 16. doi: 10.1534/g3.115.018515
PMCID:
PMC4528331
AbstractArticlePDF–1.7M
13.
Exploring the Yeast Acetylome Using Functional Genomics
Supipi Kaluarachchi Duffy, Helena Friesen, Anastasia Baryshnikova, Jean-Philippe Lambert, Yolanda T. Chong, Daniel Figeys, Brenda Andrews
Cell. Author manuscript; available in PMC 2014 Aug 30.
Published in final edited form as: Cell. 2012 May 11; 149(4): 936–948. doi: 10.1016/j.cell.2012.02.064
PMCID:
PMC4149804
AbstractArticlePDF–2.1M
14.
Protein modularity, cooperative binding, and hybrid regulatory states underlie transcriptional network diversification
Christopher R. Baker, Lauren N. Booth, Trevor R. Sorrells, Alexander D. Johnson
Cell. Author manuscript; available in PMC 2013 Sep 28.
Published in final edited form as: Cell. 2012 Sep 28; 151(1): 80–95. doi: 10.1016/j.cell.2012.08.018
PMCID:
PMC3519278
AbstractArticlePDF–2.2M
15.
Differential Interactions of Fluorescent Agonists and Antagonists with the Yeast G Protein Coupled Receptor Ste2p
Elizabeth Mathew, Anshika Bajaj, Sara M. Connelly, Hasmik Sargsyan, Fa-Xiang Ding, Alexander G. Hajduczok, Fred Naider, Mark E. Dumont
J Mol Biol. Author manuscript; available in PMC 2012 Jun 17.
Published in final edited form as: J Mol Biol. 2011 Jun 17; 409(4): 513–528. Published online 2011 Apr 6. doi: 10.1016/j.jmb.2011.03.059
PMCID:
PMC3104124
AbstractArticlePDF–2.3M
16.
Corepressor-Directed Preacetylation of Histone H3 in Promoter Chromatin Primes Rapid Transcriptional Switching of Cell-Type-Specific Genes in Yeast
Alec M. DeSimone, Jeffrey D. Laney
Mol Cell Biol. 2010 Jul; 30(13): 3342–3356. Published online 2010 May 3. doi: 10.1128/MCB.01450-09
PMCID:
PMC2897591
AbstractArticlePDF–1013K
17.
SUMO-independent in vivo activity of a SUMO-targeted ubiquitin ligase toward a short-lived transcription factor
Yang Xie, Eric M. Rubenstein, Tanja Matt, Mark Hochstrasser
Genes Dev. 2010 May 1; 24(9): 893–903. doi: 10.1101/gad.1906510
PMCID:
PMC2861189
AbstractArticlePDF–594K
18.
A ubiquitin-selective AAA-ATPase mediates transcriptional switching by remodeling a repressor-promoter DNA complex
Alexander J. Wilcox, Jeffrey D. Laney
Nat Cell Biol. Author manuscript; available in PMC 2010 Jun 1.
Published in final edited form as: Nat Cell Biol. 2009 Dec; 11(12): 1481–1486. Published online 2009 Nov 15. doi: 10.1038/ncb1997
PMCID:
PMC2787718
AbstractArticlePDF–746K
19.
Purification of Nuclear Poly(A)-binding Protein Nab2 Reveals Association with the Yeast Transcriptome and a Messenger Ribonucleoprotein Core Structure
Julien Batisse, Claire Batisse, Aidan Budd, Bettina Böttcher, Ed Hurt
J Biol Chem. 2009 Dec 11; 284(50): 34911–34917. Published online 2009 Oct 19. doi: 10.1074/jbc.M109.062034
PMCID:
PMC2787353
AbstractArticlePDF–3.8M
20.
Role of the Cell Wall Integrity and Filamentous Growth Mitogen-Activated Protein Kinase Pathways in Cell Wall Remodeling during Filamentous Growth
Barbara Birkaya, Abhiram Maddi, Jyoti Joshi, Stephen J. Free, Paul J. Cullen
Eukaryot Cell. 2009 Aug; 8(8): 1118–1133. Published online 2009 Jun 5. doi: 10.1128/EC.00006-09
PMCID:
PMC2725558
AbstractArticlePDF–1.5M

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