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Items: 1 to 20 of 51

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
3.
Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability
Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai
Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108
PMCID:
PMC10551700
AbstractArticlePDF–3.7M
4.
ISW1a modulates cohesin distribution in centromeric and pericentromeric regions
Ireneusz Litwin, Małgorzata Nowicka, Katarzyna Markowska, Ewa Maciaszczyk-Dziubińska, Paulina Tomaszewska, Robert Wysocki, Karol Kramarz
Nucleic Acids Res. 2023 Sep 22; 51(17): 9101–9121. Published online 2023 Jul 24. doi: 10.1093/nar/gkad612
PMCID:
PMC10516642
AbstractArticlePDF–2.8M
5.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
6.
Phospho‐regulated Bim1/EB1 interactions trigger Dam1c ring assembly at the budding yeast outer kinetochore
Alexander Dudziak, Lena Engelhard, Cole Bourque, Björn Udo Klink, Pascaline Rombaut, Nikolay Kornakov, Karolin Jänen, Franz Herzog, Christos Gatsogiannis, Stefan Westermann
EMBO J. 2021 Sep 15; 40(18): e108004. Published online 2021 Jul 27. doi: 10.15252/embj.2021108004
PMCID:
PMC8441410
AbstractArticlePDF–4.0M
7.
Aurora B switches relative strength of kinetochore–microtubule attachment modes for error correction
Harinath Doodhi, Taciana Kasciukovic, Lesley Clayton, Tomoyuki U. Tanaka
J Cell Biol. 2021 Jun 7; 220(6): e202011117. Published online 2021 Apr 14. doi: 10.1083/jcb.202011117
PMCID:
PMC8050843
AbstractArticlePDF–5.3M
8.
Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1
Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman
G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709
PMCID:
PMC7718751
AbstractArticlePDF–1.2M
9.
Structural mechanism of outer kinetochore Dam1:Ndc80 complex assembly on microtubules
Kyle W. Muir, Christopher Batters, Tom Dendooven, Jing Yang, Ziguo Zhang, Alister Burt, David Barford
Science. Author manuscript; available in PMC 2024 Jan 19.
Published in final edited form as: Science. 2023 Dec 8; 382(6675): 1184–1190. Published online 2023 Dec 7. doi: 10.1126/science.adj8736
PMCID:
PMC7615550
AbstractArticlePDF–2.3M
10.
Structure of the DASH/Dam1 Complex Shows its Role at the Yeast Kinetochore-Microtubule Interface
Simon Jenni, Stephen C. Harrison
Science. Author manuscript; available in PMC 2019 Oct 27.
Published in final edited form as: Science. 2018 May 4; 360(6388): 552–558. doi: 10.1126/science.aar6436
PMCID:
PMC6815591
AbstractArticlePDF–2.3M
11.
The stoichiometry of the outer kinetochore is modulated by microtubule-proximal regulatory factors
Karthik Dhatchinamoorthy, Jay R. Unruh, Jeffrey J. Lange, Michaella Levy, Brian D. Slaughter, Jennifer L. Gerton
J Cell Biol. 2019 Jul 1; 218(7): 2124–2135. Published online 2019 May 22. doi: 10.1083/jcb.201810070
PMCID:
PMC6605801
AbstractArticlePDF–2.6M
12.
Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4
Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese
G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415
PMCID:
PMC5765359
AbstractArticlePDF–2.2M
13.
Structural plasticity of the living kinetochore
Karthik Dhatchinamoorthy, Manjunatha Shivaraju, Jeffrey J. Lange, Boris Rubinstein, Jay R. Unruh, Brian D. Slaughter, Jennifer L. Gerton
J Cell Biol. 2017 Nov 6; 216(11): 3551–3570. doi: 10.1083/jcb.201703152
PMCID:
PMC5674893
AbstractArticlePDF–3.7M
14.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
15.
Architecture and dynamics of overlapped RNA regulatory networks
Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens
RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117
PMCID:
PMC5648032
AbstractArticlePDF–6.6M
16.
The interplay between chromosome stability and cell cycle control explored through gene–gene interaction and computational simulation
Jesse P. Frumkin, Biranchi N. Patra, Anthony Sevold, Kumkum Ganguly, Chaya Patel, Stephanie Yoon, Molly B. Schmid, Animesh Ray
Nucleic Acids Res. 2016 Sep 30; 44(17): 8073–8085. Published online 2016 Aug 16. doi: 10.1093/nar/gkw715
PMCID:
PMC5041493
AbstractArticlePDF–1.2M
17.
Molecular architecture of the Dam1 complex–microtubule interaction
Thibault Legal, Juan Zou, Alicja Sochaj, Juri Rappsilber, Julie P. I. Welburn
Open Biol. 2016 Mar; 6(3): 150237. Published online 2016 Mar 9. doi: 10.1098/rsob.150237
PMCID:
PMC4821239
AbstractArticlePDF–1.3M
18.
How the kinetochore couples microtubule force and centromere stretch to move chromosomes
Aussie Suzuki, Benjamin L. Badger, Julian Haase, Tomoo Ohashi, Harold P. Erickson, Edward D. Salmon, Kerry Bloom
Nat Cell Biol. Author manuscript; available in PMC 2016 Sep 14.
Published in final edited form as: Nat Cell Biol. 2016 Apr; 18(4): 382–392. Published online 2016 Mar 14. doi: 10.1038/ncb3323
PMCID:
PMC4814359
AbstractArticlePDF–1.7M
19.
Protein-RNA networks revealed through covalent RNA marks
Christopher P. Lapointe, Daniel Wilinski, Harriet A. J. Saunders, Marvin Wickens
Nat Methods. Author manuscript; available in PMC 2016 May 18.
Published in final edited form as: Nat Methods. 2015 Dec; 12(12): 1163–1170. Published online 2015 Nov 2. doi: 10.1038/nmeth.3651
PMCID:
PMC4707952
AbstractArticlePDF–856K
20.
Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p
Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt
Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518
PMCID:
PMC4616039
AbstractArticlePDF–2.2M

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