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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102333683.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 95920824.

Structure of the HOPS tethering complex, a lysosomal membrane fusion machinery

Dmitry Shvarev, Jannis Schoppe, Caroline König, Angela Perz, Nadia Füllbrunn, Stephan Kiontke, Lars Langemeyer, Dovile Januliene, Kilian Schnelle, Daniel Kümmel, Florian Fröhlich, Arne Moeller, Christian Ungermann

eLife. 2022; 11: e80901. Published online 2022 Sep 13. doi: 10.7554/eLife.80901

PMCID:: PMC9592082

Abstract Article PDF–7.4M

Select item 94555925.

Vps21 Directs the PI3K-PI(3)P-Atg21-Atg16 Module to Phagophores via Vps8 for Autophagy

Lei Zhao, Weiming You, Dan Sun, Hui Xu, Xia You, Haiqian Xu, Zulin Wu, Zhiping Xie, Yongheng Liang

Int J Mol Sci. 2022 Sep; 23(17): 9550. Published online 2022 Aug 23. doi: 10.3390/ijms23179550

PMCID:: PMC9455592

Abstract Article PDF–7.2M

Select item 92860236.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92098117.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 87625548.

Molecular species selectivity of lipid transport creates a mitochondrial sink for di‐unsaturated phospholipids

Mike F Renne, Xue Bao, Margriet WJ Hokken, Adolf S Bierhuizen, Martin Hermansson, Richard R Sprenger, Tom A Ewing, Xiao Ma, Ruud C Cox, Jos F Brouwers, Cedric H De Smet, Christer S Ejsing, Anton IPM de Kroon

EMBO J. 2022 Jan 17; 41(2): e106837. Published online 2021 Dec 7. doi: 10.15252/embj.2020106837

PMCID:: PMC8762554

Abstract Article PDF–1.0M

Select item 86940929.

Subunit exchange among endolysosomal tethering complexes is linked to contact site formation at the vacuole

Ayelén González Montoro, Prado Vargas Duarte, Kathrin Auffarth, Stefan Walter, Florian Fröhlich, Christian Ungermann

Mol Biol Cell. 2021 Dec 1; 32(22): br14. doi: 10.1091/mbc.E21-05-0227

PMCID:: PMC8694092

Abstract Article PDF–1.3M

Select item 844939410.

Diphthamide promotes TOR signaling by increasing the translation of proteins in the TORC1 pathway

Yugang Zhang, Zhewang Lin, Julia Zhu, Miao Wang, Hening Lin

Proc Natl Acad Sci U S A. 2021 Sep 14; 118(37): e2104577118. Published online 2021 Sep 10. doi: 10.1073/pnas.2104577118

PMCID:: PMC8449394

Abstract Article PDF–1.0M

Select item 805418911.

Choline restores respiration in Psd1-deficient yeast by replenishing mitochondrial phosphatidylethanolamine

Donna M. Iadarola, Alaumy Joshi, Cameron B. Caldwell, Vishal M. Gohil

J Biol Chem. 2021 Jan-Jun; 296: 100539. Published online 2021 Mar 12. doi: 10.1016/j.jbc.2021.100539

PMCID:: PMC8054189

Abstract Article PDF–901K

Select item 802569912.

Cargo release from myosin V requires the convergence of parallel pathways that phosphorylate and ubiquitylate the cargo adaptor

Sara Wong, Nathaniel L. Hepowit, Sarah A. Port, Richard G. Yau, Yutian Peng, Nadia Azad, Alim Habib, Nofar Harpaz, Maya Schuldiner, Frederick M. Hughson, Jason A. MacGurn, Lois S. Weisman

Curr Biol. Author manuscript; available in PMC 2021 Nov 16.

Published in final edited form as: Curr Biol. 2020 Nov 16; 30(22): 4399–4412.e7. Published online 2020 Sep 10. doi: 10.1016/j.cub.2020.08.062

PMCID:: PMC8025699

Abstract Article PDF–2.3M

Select item 784730813.

Nanoscopic anatomy of dynamic multi-protein complexes at membranes resolved by graphene-induced energy transfer

Nadia Füllbrunn, Zehao Li, Lara Jorde, Christian P Richter, Rainer Kurre, Lars Langemeyer, Changyuan Yu, Carola Meyer, Jörg Enderlein, Christian Ungermann, Jacob Piehler, Changjiang You

eLife. 2021; 10: e62501. Published online 2021 Jan 29. doi: 10.7554/eLife.62501

PMCID:: PMC7847308

Abstract Article PDF–5.0M

Select item 772147514.

A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits

Florian Wilfling, Chia-Wei Lee, Philipp S. Erdmann, Yumei Zheng, Dawafuti Sherpa, Stefan Jentsch, Boris Pfander, Brenda A. Schulman, Wolfgang Baumeister

Mol Cell. 2020 Dec 3; 80(5): 764–778.e7. doi: 10.1016/j.molcel.2020.10.030

PMCID:: PMC7721475

Abstract Article

Select item 771875115.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 761136816.

Pex35 is a regulator of peroxisome abundance

Ido Yofe, Kareem Soliman, Silvia G. Chuartzman, Bruce Morgan, Uri Weill, Eden Yifrach, Tobias P. Dick, Sara J. Cooper, Christer S. Ejsing, Maya Schuldiner, Einat Zalckvar, Sven Thoms

J Cell Sci. Author manuscript; available in PMC 2021 Jul 24.

Published in final edited form as: J Cell Sci. 2017 Feb 15; 130(4): 791–804. Published online 2017 Jan 3. doi: 10.1242/jcs.187914

PMCID:: PMC7611368

Abstract Article PDF–2.3M

Select item 733015117.

Synthetic dosage lethal (SDL) interaction data of Hmt1 arginine methyltransferase

Dimitris Kyriakou, Mamantia Constantinou, Antonis Kirmizis

Data Brief. 2020 Aug; 31: 105885. Published online 2020 Jun 21. doi: 10.1016/j.dib.2020.105885

PMCID:: PMC7330151

Abstract Article PDF–968K

Select item 720998018.

Vps39 is required for ethanolamine-stimulated elevation in mitochondrial phosphatidylethanolamine

Donna M. Iadarola, Writoban Basu Ball, Prachi P. Trivedi, Guo Fu, Beiyan Nan, Vishal M. Gohil

Biochim Biophys Acta Mol Cell Biol Lipids. Author manuscript; available in PMC 2021 Jun 1.

Published in final edited form as: Biochim Biophys Acta Mol Cell Biol Lipids. 2020 Jun; 1865(6): 158655. Published online 2020 Feb 11. doi: 10.1016/j.bbalip.2020.158655