PMC Links for GEO Profiles (Select 161006) - PMC

Joanna F D Hagen, Cláudia C Mendes, Shamma R Booth, Javier Figueras Jimenez, Kentaro M Tanaka, Franziska A Franke, Luis Baudouin-Gonzalez, Amber M Ridgway, Saad Arif, Maria D S Nunes, Alistair P McGregor

Mol Biol Evol. 2021 Feb; 38(2): 437–448. Published online 2020 Sep 15. doi: 10.1093/molbev/msaa232

Correction in:: Mol Biol Evol. 2022 Oct; 39(10): msac207.

PMCID:: PMC7826188

Abstract Article PDF–648K

Select item 57078054.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890025.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 47859736.

A model of muscle atrophy based on live microscopy of muscle remodelling in Drosophila metamorphosis

Yadav Kuleesha, Wee Choo Puah, Martin Wasser

R Soc Open Sci. 2016 Feb; 3(2): 150517. Published online 2016 Feb 10. doi: 10.1098/rsos.150517

PMCID:: PMC4785973

Abstract Article PDF–3.2M

Select item 45549207.

The intimate genetics of Drosophila fertilization

Benjamin Loppin, Raphaëlle Dubruille, Béatrice Horard

Open Biol. 2015 Aug; 5(8): 150076. Published online 2015 Aug 5. doi: 10.1098/rsob.150076

PMCID:: PMC4554920

Abstract Article PDF–2.8M

Select item 45283308.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 45283299.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 442916010.

The N-Ethylmaleimide-Sensitive Factor and Dysbindin Interact To Modulate Synaptic Plasticity

Avanti Gokhale, Ariana P. Mullin, Stephanie A. Zlatic, Charles A. Easley, IV, Megan E. Merritt, Nisha Raj, Jennifer Larimore, David E. Gordon, Andrew A. Peden, Subhabrata Sanyal, Victor Faundez

J Neurosci. 2015 May 13; 35(19): 7643–7653. doi: 10.1523/JNEUROSCI.4724-14.2015

PMCID:: PMC4429160

Abstract Article PDF–2.7M

Select item 435288711.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 382025812.

Mechanisms of skeletal muscle aging: insights from Drosophila and mammalian models

Fabio Demontis, Rosanna Piccirillo, Alfred L. Goldberg, Norbert Perrimon

Dis Model Mech. 2013 Nov; 6(6): 1339–1352. Published online 2013 Oct 2. doi: 10.1242/dmm.012559

PMCID:: PMC3820258

Abstract Article

Select item 353067713.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946714.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 293956615.

Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs

Enrique Blanco, Marina Ruiz-Romero, Sergi Beltran, Manel Bosch, Adrià Punset, Florenci Serras, Montserrat Corominas

BMC Dev Biol. 2010; 10: 94. Published online 2010 Sep 2. doi: 10.1186/1471-213X-10-94

PMCID:: PMC2939566

Abstract Article PDF–5.1M

Select item 292351516.

Phylogenetic analysis of ferlin genes reveals ancient eukaryotic origins

Angela Lek, Monkol Lek, Kathryn N North, Sandra T Cooper

BMC Evol Biol. 2010; 10: 231. Published online 2010 Jul 29. doi: 10.1186/1471-2148-10-231

PMCID:: PMC2923515

Abstract Article PDF–7.1M

Select item 282505317.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

Select item 281928018.

The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin

Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen

Science. Author manuscript; available in PMC 2010 Feb 10.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815

Correction in:: volume 317 on page 1325

PMCID:: PMC2819280

Abstract Article PDF–1.3M

Select item 217232119.

Synaptotagmins are trafficked to distinct subcellular domains including the postsynaptic compartment

Bill Adolfsen, Sudipta Saraswati, Motojiro Yoshihara, J. Troy Littleton

J Cell Biol. 2004 Jul 19; 166(2): 249–260. doi: 10.1083/jcb.200312054

PMCID:: PMC2172321

Abstract Article PDF–5.4M

Select item 185307220.

Complex regulation and multiple developmental functions of misfire, the Drosophila melanogaster ferlin gene

Michelle K Smith, Barbara T Wakimoto

BMC Dev Biol. 2007; 7: 21. Published online 2007 Mar 26. doi: 10.1186/1471-213X-7-21

PMCID:: PMC1853072

Abstract Article PDF–1.1M

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