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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 98363482.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 96309863.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 92860234.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92098115.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 85769176.

Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis

Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.

J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155

PMCID:: PMC8576917

Abstract Article PDF–7.4M

Select item 84926677.

A light tunable differentiation system for the creation and control of consortia in yeast

Chetan Aditya, François Bertaux, Gregory Batt, Jakob Ruess

Nat Commun. 2021; 12: 5829. Published online 2021 Oct 5. doi: 10.1038/s41467-021-26129-7

PMCID:: PMC8492667

Abstract Article PDF–3.3M

Select item 81938388.

A predictive model of gene expression reveals the role of regulatory motifs in the mating response of yeast

Amy E. Pomeroy, Matthew I. Pena, John R. Houser, Gauri Dixit, Henrik G. Dohlman, Timothy C. Elston, Beverly Errede

Sci Signal. Author manuscript; available in PMC 2021 Jun 11.

Published in final edited form as: Sci Signal. 2021 Feb 16; 14(670): eabb5235. Published online 2021 Feb 16. doi: 10.1126/scisignal.abb5235

PMCID:: PMC8193838

Abstract Article PDF–2.2M

Select item 81791619.

Chemotactic movement of a polarity site enables yeast cells to find their mates

Debraj Ghose, Katherine Jacobs, Samuel Ramirez, Timothy Elston, Daniel Lew

Proc Natl Acad Sci U S A. 2021 Jun 1; 118(22): e2025445118. Published online 2021 May 28. doi: 10.1073/pnas.2025445118

Correction in:: Proc Natl Acad Sci U S A. 2021 Nov 23; 118(47): e2118396118.

PMCID:: PMC8179161

Abstract Article PDF–2.5M

Select item 787948210.

Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes

Yeonji Chang, Gyubum Lim, Won-Ki Huh

J Cell Biol. 2021 Apr 5; 220(4): e201912060. Published online 2021 Feb 10. doi: 10.1083/jcb.201912060

PMCID:: PMC7879482

Abstract Article PDF–5.9M

Select item 780979611.

A new linear cyclin docking motif that mediates exclusively S‐phase CDK‐specific signaling

Ilona Faustova, Luka Bulatovic, Frida Matiyevskaya, Ervin Valk, Mihkel Örd, Mart Loog

EMBO J. 2021 Jan 15; 40(2): e105839. Published online 2020 Nov 19. doi: 10.15252/embj.2020105839

PMCID:: PMC7809796

Abstract Article PDF–1.9M

Select item 771875112.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 732543513.

A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae

Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum

J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628

PMCID:: PMC7325435

Abstract Article

Select item 729408914.

CRISPR-addressable yeast strains with applications in human G protein–coupled receptor profiling and synthetic biology

Jacob B. Rowe, Geoffrey J. Taghon, Nicholas J. Kapolka, William M. Morgan, Daniel G. Isom

J Biol Chem. 2020 Jun 12; 295(24): 8262–8271. Published online 2020 May 1. doi: 10.1074/jbc.RA120.013066

PMCID:: PMC7294089

Abstract Article PDF–2.8M

Select item 682965515.

Mating yeast cells use an intrinsic polarity site to assemble a pheromone-gradient tracking machine

Xin Wang, Wei Tian, Bryan T. Banh, Bethanie-Michelle Statler, Jie Liang, David E. Stone

J Cell Biol. 2019 Nov 4; 218(11): 3730–3752. Published online 2019 Sep 30. doi: 10.1083/jcb.201901155

PMCID:: PMC6829655

Abstract Article PDF–6.2M

Select item 671944816.

Mechanical stress impairs pheromone signaling via Pkc1-mediated regulation of the MAPK scaffold Ste5

Frank van Drogen, Ranjan Mishra, Fabian Rudolf, Michal J. Walczak, Sung Sik Lee, Wolfgang Reiter, Björn Hegemann, Serge Pelet, Ilse Dohnal, Andres Binolfi, Zinaida Yudina, Philipp Selenko, Gerhard Wider, Gustav Ammerer, Matthias Peter

J Cell Biol. 2019 Sep 2; 218(9): 3117–3133. Published online 2019 Jul 17. doi: 10.1083/jcb.201808161

PMCID:: PMC6719448

Abstract Article PDF–2.7M

Select item 629136617.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 601052118.

An Antimicrobial Peptide Induces FIG1-Dependent Cell Death During Cell Cycle Arrest in Yeast

Vladimir J. Arellano, Paula Martinell García, Jonathan G. Rodríguez Plaza, Maria T. Lara Ortiz, Gabriele Schreiber, Rudolf Volkmer, Edda Klipp, Gabriel Del Rio

Front Microbiol. 2018; 9: 1240. Published online 2018 Jun 14. doi: 10.3389/fmicb.2018.01240