PMC Links for GEO Profiles (Select 1691055) - PMC

Select item 104260851.

Epigenetic instability caused by absence of CIZ1 drives transformation during quiescence cycles

Olivia G. Dobbs, Rosemary H. C. Wilson, Katherine Newling, Justin F.-X. Ainscough, Dawn Coverley

BMC Biol. 2023; 21: 175. Published online 2023 Aug 15. doi: 10.1186/s12915-023-01671-6

PMCID:: PMC10426085

Select item 89279712.

Prion-like domains drive CIZ1 assembly formation at the inactive X chromosome

Sajad Sofi, Louisa Williamson, Gabrielle L. Turvey, Charlotte Scoynes, Claire Hirst, Jonathan Godwin, Neil Brockdorff, Justin Ainscough, Dawn Coverley

J Cell Biol. 2022 Apr 4; 221(4): e202103185. Published online 2022 Mar 15. doi: 10.1083/jcb.202103185

PMCID:: PMC8927971

Abstract Article PDF–7.2M

Select item 64842253.

Maintenance of epigenetic landscape requires CIZ1 and is corrupted in differentiated fibroblasts in long-term culture

Emma R. Stewart, Robert M. L. Turner, Katherine Newling, Rebeca Ridings-Figueroa, Victoria Scott, Peter D. Ashton, Justin F. X. Ainscough, Dawn Coverley

Nat Commun. 2019; 10: 460. Published online 2019 Jan 28. doi: 10.1038/s41467-018-08072-2

PMCID:: PMC6484225

Abstract Article PDF–3.4M

Select item 62751574.

Consequences of Cre-Mediated Deletion of Ciz1 Exon 5 in Mice

Jianfeng Xiao, Mohammad Moshahid Khan, Satya Vemula, Jun Tian, Mark S. LeDoux

FEBS Lett. Author manuscript; available in PMC 2019 Sep 1.

Published in final edited form as: FEBS Lett. 2018 Sep; 592(18): 3101–3110. Published online 2018 Aug 29. doi: 10.1002/1873-3468.13221

PMCID:: PMC6275157

Abstract Article PDF–772K

Select item 58778055.

DNA damage and neurodegenerative phenotypes in aged Ciz1 null mice

Mohammad Moshahid Khan, Jianfeng Xiao, Damini Patel, Mark S. LeDoux

Neurobiol Aging. Author manuscript; available in PMC 2019 Feb 1.

Published in final edited form as: Neurobiol Aging. 2018 Feb; 62: 180–190. doi: 10.1016/j.neurobiolaging.2017.10.014

PMCID:: PMC5877805

Abstract Article PDF–1.4M

Select item 54587556.

The nuclear matrix protein CIZ1 facilitates localization of Xist RNA to the inactive X-chromosome territory

Rebeca Ridings-Figueroa, Emma R. Stewart, Tatyana B. Nesterova, Heather Coker, Greta Pintacuda, Jonathan Godwin, Rose Wilson, Aidan Haslam, Fred Lilley, Renate Ruigrok, Sumia A. Bageghni, Ghadeer Albadrani, William Mansfield, Jo-An Roulson, Neil Brockdorff, Justin F.X. Ainscough, Dawn Coverley

Genes Dev. 2017 May 1; 31(9): 876–888. doi: 10.1101/gad.295907.117

PMCID:: PMC5458755

Abstract Article PDF–14M

Select item 52784287.

Cardiomyocyte-specific expression of the nuclear matrix protein, CIZ1, stimulates production of mono-nucleated cells with an extended window of proliferation in the postnatal mouse heart

Sumia A. Bageghni, Georgia A. Frentzou, Mark J. Drinkhill, William Mansfield, Dawn Coverley, Justin F. X. Ainscough

Biol Open. 2017 Jan 15; 6(1): 92–99. Published online 2016 Dec 1. doi: 10.1242/bio.021550

PMCID:: PMC5278428

Abstract Article PDF–1.0M

Select item 49925958.

Motor phenotypes and molecular networks associated with germline deficiency of Ciz1

Jianfeng Xiao, Satya R. Vemula, Yi Xue, Mohammad M. Khan, Korah P. Kuruvilla, Esther M. Marquez-Lona, Madison R. Cobb, Mark S. LeDoux

Exp Neurol. Author manuscript; available in PMC 2017 Sep 1.

Published in final edited form as: Exp Neurol. 2016 Sep; 283(Pt A): 110–120. Published online 2016 May 7. doi: 10.1016/j.expneurol.2016.05.006

PMCID:: PMC4992595

Abstract Article PDF–2.0M

Select item 35724109.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 284431911.

Ciz1 cooperates with cyclin-A–CDK2 to activate mammalian DNA replication in vitro

Nikki A. Copeland, Heather E. Sercombe, Justin F. X. Ainscough, Dawn Coverley

J Cell Sci. 2010 Apr 1; 123(7): 1108–1115. Published online 2010 Mar 9. doi: 10.1242/jcs.059345

PMCID:: PMC2844319

Abstract Article

Select item 264909512.

Glucocorticoid Receptor Activation of the Ciz1-Lcn2 Locus by Long Range Interactions

Ofir Hakim, Sam John, Jian Qun Ling, Simon C. Biddie, Andrew R. Hoffman, Gordon L. Hager

J Biol Chem. 2009 Mar 6; 284(10): 6048–6052. doi: 10.1074/jbc.C800212200

PMCID:: PMC2649095

Abstract Article PDF–383K

Select item 255627013.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 31099214.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098015.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924116.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 1683317.

Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray

Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko

Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127

PMCID:: PMC16833

Abstract Article PDF–847K

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