PMC Links for GEO Profiles (Select 16983590) - PMC

Select item 105920581.

Single-nucleus RNA sequencing of developing superior colliculus identifies neuronal diversity and candidate mediators of circuit assembly

James S. Choi, Ana C. Ayupe, Felipe Beckedorff, Paola Catanuto, Robyn McCartan, Konstantin Levay, Kevin K. Park

Cell Rep. Author manuscript; available in PMC 2023 Oct 23.

Published in final edited form as: Cell Rep. 2023 Sep 26; 42(9): 113037. Published online 2023 Aug 24. doi: 10.1016/j.celrep.2023.113037

PMCID:: PMC10592058

Abstract Article PDF–4.5M

Select item 79387702.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 66221273.

Presynaptic Dystroglycan–Pikachurin Complex Regulates the Proper Synaptic Connection between Retinal Photoreceptor and Bipolar Cells

Yoshihiro Omori, Fumiyuki Araki, Taro Chaya, Naoko Kajimura, Shoichi Irie, Koji Terada, Yuki Muranishi, Toshinori Tsujii, Shinji Ueno, Toshiyuki Koyasu, Yasuhiro Tamaki, Mineo Kondo, Shiro Amano, Takahisa Furukawa

J Neurosci. 2012 May 2; 32(18): 6126–6137. doi: 10.1523/JNEUROSCI.0322-12.2012

PMCID:: PMC6622127

Abstract Article PDF–5.5M

Select item 62034504.

Transsynaptic Binding of Orphan Receptor GPR179 to Dystroglycan-Pikachurin Complex Is Essential for the Synaptic Organization of Photoreceptors

Cesare Orlandi, Yoshihiro Omori, Yuchen Wang, Yan Cao, Akiko Ueno, Michel J. Roux, Giuseppe Condomitti, Joris de Wit, Motoi Kanagawa, Takahisa Furukawa, Kirill A. Martemyanov

Cell Rep. Author manuscript; available in PMC 2018 Oct 26.

Published in final edited form as: Cell Rep. 2018 Oct 2; 25(1): 130–145.e5. doi: 10.1016/j.celrep.2018.08.068

PMCID:: PMC6203450

Abstract Article PDF–2.9M

Select item 44750185.

Pikachurin Protein Required for Increase of Cone Electroretinogram B-Wave during Light Adaptation

Masatoshi Nagaya, Shinji Ueno, Taro Kominami, Ayami Nakanishi, Toshiyuki Koyasu, Mineo Kondo, Takahisa Furukawa, Hiroko Terasaki

PLoS One. 2015; 10(6): e0128921. Published online 2015 Jun 19. doi: 10.1371/journal.pone.0128921

PMCID:: PMC4475018

Abstract Article PDF–1.3M

Select item 44255086.

Role of the Mouse Retinal Photoreceptor Ribbon Synapse in Visual Motion Processing for Optokinetic Responses

Yuko Sugita, Fumiyuki Araki, Taro Chaya, Kenji Kawano, Takahisa Furukawa, Kenichiro Miura

PLoS One. 2015; 10(5): e0124132. Published online 2015 May 8. doi: 10.1371/journal.pone.0124132

PMCID:: PMC4425508

Abstract Article PDF–1.2M

Select item 35724107.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 35143128.

Cell Specific Post-Translational Processing of Pikachurin, A Protein Involved in Retinal Synaptogenesis

Jianzhong Han, Ellen Townes-Anderson

PLoS One. 2012; 7(12): e50552. Published online 2012 Dec 4. doi: 10.1371/journal.pone.0050552

PMCID:: PMC3514312

Abstract Article PDF–495K

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 301853810.

Pikachurin interaction with dystroglycan is diminished by defective O-mannosyl glycosylation in congenital muscular dystrophy models and rescued by LARGE overexpression

Huaiyu Hu, Jing Li, Zhen Zhang, Miao Yu

Neurosci Lett. Author manuscript; available in PMC 2012 Feb 1.

Published in final edited form as: Neurosci Lett. 2011 Feb 1; 489(1): 10–15. Published online 2010 Dec 1. doi: 10.1016/j.neulet.2010.11.056

PMCID:: PMC3018538

Abstract Article PDF–360K

Select item 295119511.

Post-translational Maturation of Dystroglycan Is Necessary for Pikachurin Binding and Ribbon Synaptic Localization

Motoi Kanagawa, Yoshihiro Omori, Shigeru Sato, Kazuhiro Kobayashi, Yuko Miyagoe-Suzuki, Shin'ichi Takeda, Tamao Endo, Takahisa Furukawa, Tatsushi Toda

J Biol Chem. 2010 Oct 8; 285(41): 31208–31216. Published online 2010 Aug 3. doi: 10.1074/jbc.M110.116343

PMCID:: PMC2951195

Abstract Article PDF–1.4M

Select item 252903412.

Transcriptome-based systematic identification of extracellular matrix proteins

Ri-ichiroh Manabe, Ko Tsutsui, Tomiko Yamada, Mina Kimura, Itsuko Nakano, Chisei Shimono, Noriko Sanzen, Yutaka Furutani, Tomohiko Fukuda, Yasuko Oguri, Keiko Shimamoto, Daiji Kiyozumi, Yuya Sato, Yoshikazu Sado, Haruki Senoo, Shohei Yamashina, Shiro Fukuda, Jun Kawai, Nobuo Sugiura, Koji Kimata, Yoshihide Hayashizaki, Kiyotoshi Sekiguchi

Proc Natl Acad Sci U S A. 2008 Sep 2; 105(35): 12849–12854. Published online 2008 Aug 29. doi: 10.1073/pnas.0803640105

PMCID:: PMC2529034

Abstract Article PDF–1.1M

Select item 31099213.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098014.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 2980016.

Database resources of the National Center for Biotechnology Information

David L. Wheeler, Deanna M. Church, Alex E. Lash, Detlef D. Leipe, Thomas L. Madden, Joan U. Pontius, Gregory D. Schuler, Lynn M. Schriml, Tatiana A. Tatusova, Lukas Wagner, Barbara A. Rapp

Nucleic Acids Res. 2001 Jan 1; 29(1): 11–16. doi: 10.1093/nar/29.1.11

PMCID:: PMC29800

Abstract Article PDF–101K

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