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Items: 20

1.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
2.
SMAR1 inhibits proliferation, EMT and Warburg effect of bladder cancer cells by suppressing the activity of the Wnt/β-catenin signaling pathway
Pengfei Bao, Peng Li, Xiaoqing Zhou, Huijiang Zhang, Shengjie You, Zhaoyu Xu, Qi Wu
Cell Cycle. 2023; 22(2): 229–241. Published online 2022 Aug 18. doi: 10.1080/15384101.2022.2112006
PMCID:
PMC9817122
AbstractArticlePDF–2.7M
3.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
4.
STRAP regulates alternative splicing fidelity during lineage commitment of mouse embryonic stem cells
Lin Jin, Yunjia Chen, David K. Crossman, Arunima Datta, Trung Vu, James A. Mobley, Malay Kumar Basu, Mariangela Scarduzio, Hengbin Wang, Chenbei Chang, Pran K. Datta
Nat Commun. 2020; 11: 5941. Published online 2020 Nov 23. doi: 10.1038/s41467-020-19698-6
PMCID:
PMC7684319
AbstractArticlePDF–3.4M
5.
Constitutive expression of SMAR1 confers susceptibility to Mycobacterium tuberculosis infection in a transgenic mouse model
Bhawna Yadav, Sunil K. Malonia, Subeer S. Majumdar, Pushpa Gupta, Neerja Wadhwa, Archana Badhwar, Umesh D. Gupta, Vishwa M. Katoch, Samit Chattopadhyay
Indian J Med Res. 2015 Dec; 142(6): 732–741. doi: 10.4103/0971-5916.174566
PMCID:
PMC4774070
AbstractArticlePDF–1.2M
6.
Nuclear matrix protein SMAR1 control regulatory T-cell fate during inflammatory bowel disease (IBD)
B Mirlekar, S Ghorai, M Khetmalas, R Bopanna, S Chattopadhyay
Mucosal Immunol. 2015 Nov; 8(6): 1184–1200. Published online 2015 May 20. doi: 10.1038/mi.2015.42
PMCID:
PMC4762908
AbstractArticlePDF–4.9M
7.
Nuclear matrix binding protein SMAR1 regulates T-cell differentiation and allergic airway disease
S V Chemmannur, A J Badhwar, B Mirlekar, S K Malonia, M Gupta, N Wadhwa, R Bopanna, U Mabalirajan, S Majumdar, B Ghosh, S Chattopadhyay
Mucosal Immunol. 2015 Nov; 8(6): 1201–1211. Published online 2015 Mar 4. doi: 10.1038/mi.2015.11
PMCID:
PMC4762901
AbstractArticlePDF–2.2M
8.
Regulation of T cell lineage commitment by SMAR1 during inflammatory & autoimmune diseases
Bhalchandra Mirlekar, Subeer Majumdar, Madhukar Khetmalas, Samit Chattopadhyay
Indian J Med Res. 2015 Oct; 142(4): 405–413. doi: 10.4103/0971-5916.169198
PMCID:
PMC4683825
AbstractArticlePDF–1.7M
9.
Reversible induction of translational isoforms of p53 in glucose deprivation
D Khan, A Katoch, A Das, A Sharathchandra, R Lal, P Roy, S Das, S Chattopadhyay, S Das
Cell Death Differ. 2015 Jul; 22(7): 1203–1218. Published online 2015 Feb 27. doi: 10.1038/cdd.2014.220
PMCID:
PMC4572868
AbstractArticlePDF–4.3M
10.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
11.
Regulation of GAD65 expression by SMAR1 and p53 upon Streptozotocin treatment
Sandeep Singh, Varsheish Raina, Pavithra Lakshminarsimhan Chavali, Taronish Dubash, Sreenath Kadreppa, Pradeep Parab, Samit Chattopadhyay
BMC Mol Biol. 2012; 13: 28. Published online 2012 Sep 14. doi: 10.1186/1471-2199-13-28
Correction in:
BMC Mol Cell Biol. 2020; 21: 61.
PMCID:
PMC3459802
AbstractArticlePDF–2.6M
12.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
13.
Coordinated regulation of p53 apoptotic targets BAX and PUMA by SMAR1 through an identical MAR element
Surajit Sinha, Sunil Kumar Malonia, Smriti P K Mittal, Kamini Singh, Sreenath Kadreppa, Rohan Kamat, Robin Mukhopadhyaya, Jayanta K Pal, Samit Chattopadhyay
EMBO J. 2010 Feb 17; 29(4): 830–842. Published online 2010 Jan 14. doi: 10.1038/emboj.2009.395
PMCID:
PMC2829167
AbstractArticlePDF–1.4M
14.
Tumor suppressor protein SMAR1 modulates the roughness of cell surface: combined AFM and SEM study
Ruchika Kaul-Ghanekar, Sandeep Singh, Hitesh Mamgain, Archana Jalota-Badhwar, Kishore M Paknikar, Samit Chattopadhyay
BMC Cancer. 2009; 9: 350. Published online 2009 Oct 2. doi: 10.1186/1471-2407-9-350
PMCID:
PMC2765988
AbstractArticlePDF–2.0M
15.
Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo
Alexei V. Evsikov, Joel H. Graber, J. Michael Brockman, Aleš Hampl, Andrea E. Holbrook, Priyam Singh, John J. Eppig, Davor Solter, Barbara B. Knowles
Genes Dev. 2006 Oct 1; 20(19): 2713–2727. doi: 10.1101/gad.1471006
PMCID:
PMC1578697
AbstractArticlePDF–1.7M
16.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
17.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
18.
GenePaint.org: an atlas of gene expression patterns in the mouse embryo
Axel Visel, Christina Thaller, Gregor Eichele
Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029
PMCID:
PMC308763
AbstractArticlePDF–253K
19.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
20.
Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray
Tetsuya S. Tanaka, Saied A. Jaradat, Meng K. Lim, George J. Kargul, Xiaohong Wang, Marija J. Grahovac, Serafino Pantano, Yuri Sano, Yulan Piao, Ramaiah Nagaraja, Hirofumi Doi, William H. Wood, III, Kevin G. Becker, Minoru S. H. Ko
Proc Natl Acad Sci U S A. 2000 Aug 1; 97(16): 9127–9132. doi: 10.1073/pnas.97.16.9127
PMCID:
PMC16833
AbstractArticlePDF–847K

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