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Items: 1 to 20 of 130

1.
Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle
Michael J. O’Brien, Athar Ansari
Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.
Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968
PMCID:
PMC10872477
AbstractArticlePDF–1.7M
2.
The social and structural architecture of the yeast protein interactome
André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann
Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5
PMCID:
PMC10700138
AbstractArticlePDF–20M
3.
PCNA recruits cohesin loader Scc2 to ensure sister chromatid cohesion
Ivan Psakhye, Ryotaro Kawasumi, Takuya Abe, Kouji Hirota, Dana Branzei
Nat Struct Mol Biol. 2023; 30(9): 1286–1294. Published online 2023 Aug 17. doi: 10.1038/s41594-023-01064-x
PMCID:
PMC10497406
AbstractArticlePDF–9.2M
4.
Replisome-cohesin interactions provided by the Tof1-Csm3 and Mrc1 cohesion establishment factors
Sudikchya Shrestha, Masashi Minamino, Zhuo A. Chen, Céline Bouchoux, Juri Rappsilber, Frank Uhlmann
Chromosoma. 2023; 132(2): 117–135. Published online 2023 May 11. doi: 10.1007/s00412-023-00797-4
PMCID:
PMC10247859
AbstractArticlePDF–2.3M
5.
Rio1 downregulates centromeric RNA levels to promote the timely assembly of structurally fit kinetochores
Ksenia Smurova, Michela Damizia, Carmela Irene, Stefania Stancari, Giovanna Berto, Giulia Perticari, Maria Giuseppina Iacovella, Ilaria D’Ambrosio, Maria Giubettini, Réginald Philippe, Chiara Baggio, Elisabetta Callegaro, Andrea Casagranda, Alessandro Corsini, Vincenzo Gentile Polese, Anna Ricci, Erik Dassi, Peter De Wulf
Nat Commun. 2023; 14: 3172. Published online 2023 Jun 1. doi: 10.1038/s41467-023-38920-9
PMCID:
PMC10235086
AbstractArticlePDF–2.6M
6.
A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon
Nir Cohen, Naama Aviram, Maya Schuldiner
EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385
PMCID:
PMC10233368
AbstractArticlePDF–1.2M
7.
Suppression of chromosome instability by targeting a DNA helicase in budding yeast
Molly R. Gordon, Jin Zhu, Gordon Sun, Rong Li
Mol Biol Cell. 2023 Jan 1; 34(1): ar3. Published online 2022 Dec 15. doi: 10.1091/mbc.E22-09-0395
PMCID:
PMC9816644
AbstractArticlePDF–3.9M
8.
A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans
Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor
Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136
PMCID:
PMC9630986
AbstractArticlePDF–2.2M
9.
Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion
Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton
Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019
PMCID:
PMC9286023
AbstractArticle
10.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
11.
Identification of 14-3-3 Proteins, Polo kinase, and RNA-binding protein Pes4 as Key Regulators of Meiotic Commitment in Budding Yeast
Janardan N. Gavade, Chris M. Puccia, S. Grace Herod, Jonathan C. Trinidad, Luke E. Berchowitz, Soni Lacefield
Curr Biol. Author manuscript; available in PMC 2023 Apr 11.
Published in final edited form as: Curr Biol. 2022 Apr 11; 32(7): 1534–1547.e9. Published online 2022 Mar 2. doi: 10.1016/j.cub.2022.02.022
PMCID:
PMC9007917
AbstractArticlePDF–2.2M
12.
The fork protection complex recruits FACT to reorganize nucleosomes during replication
Barbara Safaric, Erika Chacin, Matthias J Scherr, Lional Rajappa, Christian Gebhardt, Christoph F Kurat, Thorben Cordes, Karl E Duderstadt
Nucleic Acids Res. 2022 Feb 22; 50(3): 1317–1334. Published online 2022 Jan 21. doi: 10.1093/nar/gkac005
PMCID:
PMC8860610
AbstractArticlePDF–5.7M
13.
The interplay of RNA:DNA hybrid structure and G-quadruplexes determines the outcome of R-loop-replisome collisions
Charanya Kumar, Sahil Batra, Jack D Griffith, Dirk Remus
eLife. 2021; 10: e72286. Published online 2021 Sep 8. doi: 10.7554/eLife.72286
PMCID:
PMC8479836
AbstractArticlePDF–4.7M
14.
A mechanism for Rad53 to couple leading- and lagging-strand DNA synthesis under replication stress in budding yeast
Albert Serra-Cardona, Chuanhe Yu, Xinmin Zhang, Xu Hua, Yuan Yao, Jiaqi Zhou, Haiyun Gan, Zhiguo Zhang
Proc Natl Acad Sci U S A. 2021 Sep 21; 118(38): e2109334118. Published online 2021 Sep 16. doi: 10.1073/pnas.2109334118
PMCID:
PMC8463864
AbstractArticlePDF–1.7M
15.
Rad53 checkpoint kinase regulation of DNA replication fork rate via Mrc1 phosphorylation
Allison W McClure, John FX Diffley
eLife. 2021; 10: e69726. Published online 2021 Aug 13. doi: 10.7554/eLife.69726
PMCID:
PMC8387023
AbstractArticlePDF–4.9M
16.
Catalytically inactive Cas9 impairs DNA replication fork progression to induce focal genomic instability
Goro Doi, Satoshi Okada, Takehiro Yasukawa, Yuki Sugiyama, Siqin Bala, Shintaro Miyazaki, Dongchon Kang, Takashi Ito
Nucleic Acids Res. 2021 Jan 25; 49(2): 954–968. Published online 2021 Jan 4. doi: 10.1093/nar/gkaa1241
PMCID:
PMC7826275
AbstractArticlePDF–1.5M
17.
Separable functions of Tof1/Timeless in intra-S-checkpoint signalling, replisome stability and DNA topological stress
Rose Westhorpe, Andrea Keszthelyi, Nicola E Minchell, David Jones, Jonathan Baxter
Nucleic Acids Res. 2020 Dec 2; 48(21): 12169–12187. Published online 2020 Nov 9. doi: 10.1093/nar/gkaa963
PMCID:
PMC7708041
AbstractArticlePDF–2.0M
18.
A genetic interaction map centered on cohesin reveals auxiliary factors involved in sister chromatid cohesion in S. cerevisiae
Su Ming Sun, Amandine Batté, Mireille Elmer, Sophie C. van der Horst, Tibor van Welsem, Gordon Bean, Trey Ideker, Fred van Leeuwen, Haico van Attikum
J Cell Sci. 2020 May 15; 133(10): jcs237628. Published online 2020 May 22. doi: 10.1242/jcs.237628
PMCID:
PMC7325435
AbstractArticle
19.
Cohesion is established during DNA replication utilising chromosome associated cohesin rings as well as those loaded de novo onto nascent DNAs
Madhusudhan Srinivasan, Marco Fumasoni, Naomi J Petela, Andrew Murray, Kim A Nasmyth
eLife. 2020; 9: e56611. Published online 2020 Jun 9. doi: 10.7554/eLife.56611
PMCID:
PMC7282809
AbstractArticlePDF–4.9M
20.
Division of Labor between PCNA Loaders in DNA Replication and Sister Chromatid Cohesion Establishment
Hon Wing Liu, Céline Bouchoux, Mélanie Panarotto, Yasutaka Kakui, Harshil Patel, Frank Uhlmann
Mol Cell. 2020 May 21; 78(4): 725–738.e4. doi: 10.1016/j.molcel.2020.03.017
PMCID:
PMC7242910
AbstractArticle

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