PMC Links for GEO Profiles (Select 17160897) - PMC

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 76580104.

Fluidity and Lipid Composition of Membranes of Peroxisomes, Mitochondria and the ER From Oleic Acid-Induced Saccharomyces cerevisiae

Katharina Reglinski, Laura Steinfort-Effelsberg, Erdinc Sezgin, Christian Klose, Harald W. Platta, Wolfgang Girzalsky, Christian Eggeling, Ralf Erdmann

Front Cell Dev Biol. 2020; 8: 574363. Published online 2020 Oct 29. doi: 10.3389/fcell.2020.574363

PMCID:: PMC7658010

Abstract Article PDF–1.8M

Select item 68374595.

Acetate but not propionate induces oxidative stress in bakers’ yeast Saccharomyces cerevisiae

Halyna M Semchyshyn, Oleksandra B Abrat, Jacek Miedzobrodzki, Yoshiharu Inoue, Volodymyr I Lushchak

Redox Rep. 2011; 16(1): 15–23. Published online 2013 Jul 19. doi: 10.1179/174329211X12968219310954

PMCID:: PMC6837459

Abstract Article PDF–437K

Select item 65913606.

Ctt1 catalase activity potentiates antifungal azoles in the emerging opportunistic pathogen Saccharomyces cerevisiae

Dorival Martins, Dao Nguyen, Ann M. English

Sci Rep. 2019; 9: 9185. Published online 2019 Jun 24. doi: 10.1038/s41598-019-45070-w

PMCID:: PMC6591360

Abstract Article PDF–2.2M

Select item 64681677.

Genome-wide analysis of genomic alterations induced by oxidative DNA damage in yeast

Ke Zhang, Dao-Qiong Zheng, Yang Sui, Lei Qi, Thomas D Petes

Nucleic Acids Res. 2019 Apr 23; 47(7): 3521–3535. Published online 2019 Jan 22. doi: 10.1093/nar/gkz027

PMCID:: PMC6468167

Abstract Article PDF–6.5M

Select item 60455468.

Yeast polyubiquitin gene UBI4 deficiency leads to early induction of apoptosis and shortened replicative lifespan

Wei Zhao, Tao Zhou, Hua-Zhen Zheng, Kun-Pei Qiu, Hong-Jing Cui, Hui Yu, Xin-Guang Liu

Cell Stress Chaperones. 2018 Jul; 23(4): 527–537. Published online 2017 Nov 7. doi: 10.1007/s12192-017-0860-3

PMCID:: PMC6045546

Abstract Article PDF–2.6M

Select item 60455419.

Generation and propagation of yeast prion [URE3] are elevated under electromagnetic field

Hui-Yong Lian, Kang-Wei Lin, Chuanjun Yang, Peng Cai

Cell Stress Chaperones. 2018 Jul; 23(4): 581–594. Published online 2017 Dec 6. doi: 10.1007/s12192-017-0867-9

PMCID:: PMC6045541

Abstract Article PDF–2.6M

Select item 579818410.

Association of improved oxidative stress tolerance and alleviation of glucose repression with superior xylose-utilization capability by a natural isolate of Saccharomyces cerevisiae

Cheng Cheng, Rui-Qi Tang, Liang Xiong, Ronald E. Hector, Feng-Wu Bai, Xin-Qing Zhao

Biotechnol Biofuels. 2018; 11: 28. Published online 2018 Feb 5. doi: 10.1186/s13068-018-1018-y

PMCID:: PMC5798184

Abstract Article PDF–2.2M

Select item 570394611.

Modification and functional adaptation of the MBF1 gene family in the lichenized fungus Endocarpon pusillum under environmental stress

Yanyan Wang, Xinli Wei, Jenpan Huang, Jiangchun Wei

Sci Rep. 2017; 7: 16333. Published online 2017 Nov 27. doi: 10.1038/s41598-017-16716-4

PMCID:: PMC5703946

Abstract Article PDF–2.6M

Select item 566188512.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 560025413.

The Genetic Landscape of a Cell

Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Sep 15.

Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823

PMCID:: PMC5600254

Abstract Article PDF–2.4M

Select item 555455014.

MET18 Deficiency Increases the Sensitivity of Yeast to Oxidative Stress and Shortens Replicative Lifespan by Inhibiting Catalase Activity

Ya-qin Chen, Xin-guang Liu, Wei Zhao, Hongjing Cui, Jie Ruan, Yuan Yuan, Zhiguang Tu

Biomed Res Int. 2017; 2017: 7587395. Published online 2017 Jul 30. doi: 10.1155/2017/7587395

PMCID:: PMC5554550

Abstract Article PDF–1.6M

Select item 543825115.

Nonlinear feedback drives homeostatic plasticity in H₂O₂ stress response

Youlian Goulev, Sandrine Morlot, Audrey Matifas, Bo Huang, Mikael Molin, Michel B Toledano, Gilles Charvin

eLife. 2017; 6: e23971. Published online 2017 Apr 18. doi: 10.7554/eLife.23971

PMCID:: PMC5438251

Abstract Article PDF–4.6M

Select item 520924516.

A network of conserved synthetic lethal interactions for exploration of precision cancer therapy

Rohith Srivas, John Paul Shen, Chih Cheng Yang, Su Ming Sun, Jianfeng Li, Andrew M. Gross, James Jensen, Katherine Licon, Ana Bojorquez-Gomez, Kristin Klepper, Justin Huang, Daniel Pekin, Jia L. Xu, Huwate Yeerna, Vignesh Sivaganesh, Leonie Kollenstart, Haico van Attikum, Pedro Aza-Blanc, Robert W. Sobol, Trey Ideker

Mol Cell. Author manuscript; available in PMC 2017 Aug 4.

Published in final edited form as: Mol Cell. 2016 Aug 4; 63(3): 514–525. Published online 2016 Jul 21. doi: 10.1016/j.molcel.2016.06.022

PMCID:: PMC5209245

Abstract Article PDF–1.6M

Select item 520434817.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 491007218.

Respiratory metabolism and calorie restriction relieve persistent endoplasmic reticulum stress induced by calcium shortage in yeast

Stefano Busti, Valeria Mapelli, Farida Tripodi, Rossella Sanvito, Fulvio Magni, Paola Coccetti, Marcella Rocchetti, Jens Nielsen, Lilia Alberghina, Marco Vanoni

Sci Rep. 2016; 6: 27942. Published online 2016 Jun 16. doi: 10.1038/srep27942

PMCID:: PMC4910072

Abstract Article PDF–2.9M

Select item 484875819.

An inter‐species protein–protein interaction network across vast evolutionary distance

Quan Zhong, Samuel J Pevzner, Tong Hao, Yang Wang, Roberto Mosca, Jörg Menche, Mikko Taipale, Murat Taşan, Changyu Fan, Xinping Yang, Patrick Haley, Ryan R Murray, Flora Mer, Fana Gebreab, Stanley Tam, Andrew MacWilliams, Amélie Dricot, Patrick Reichert, Balaji Santhanam, Lila Ghamsari, Michael A Calderwood, Thomas Rolland, Benoit Charloteaux, Susan Lindquist, Albert‐László Barabási, David E Hill, Patrick Aloy, Michael E Cusick, Yu Xia, Frederick P Roth, Marc Vidal

Mol Syst Biol. 2016 Apr; 12(4): 865. Published online 2016 Apr 23. doi: 10.15252/msb.20156484

PMCID:: PMC4848758

Abstract Article PDF–2.1M

Select item 426737720.

Respiration triggers heme transfer from cytochrome c peroxidase to catalase in yeast mitochondria

Meena Kathiresan, Dorival Martins, Ann M. English

Proc Natl Acad Sci U S A. 2014 Dec 9; 111(49): 17468–17473. Published online 2014 Nov 24. doi: 10.1073/pnas.1409692111

PMCID:: PMC4267377

Abstract Article PDF–1.0M

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