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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105517003.

Misregulation of cell cycle-dependent methylation of budding yeast CENP-A contributes to chromosomal instability

Prashant K. Mishra, Wei-Chun Au, Pedro G. Castineira, Nazrin Ali, John Stanton, Lars Boeckmann, Yoshimitsu Takahashi, Michael Costanzo, Charles Boone, Kerry S. Bloom, Peter H. Thorpe, Munira A. Basrai

Mol Biol Cell. 2023 Sep 1; 34(10): ar99. Published online 2023 Aug 17. doi: 10.1091/mbc.E23-03-0108

PMCID:: PMC10551700

Abstract Article PDF–3.7M

Select item 103996094.

Helicase activities of Rad5 and Rrm3 genetically interact in the prevention of recombinogenic DNA lesions in Saccharomyces cerevisiae

Julius Muellner, Kristina Hildegard Schmidt

DNA Repair (Amst) Author manuscript; available in PMC 2024 Jun 1.

Published in final edited form as: DNA Repair (Amst). 2023 Jun; 126: 103488. Published online 2023 Mar 30. doi: 10.1016/j.dnarep.2023.103488

PMCID:: PMC10399609

Abstract Article PDF–1.0M

Select item 101645715.

Widely spaced and divergent inverted repeats become a potent source of chromosomal rearrangements in long single-stranded DNA regions

Anissia Ait Saada, Wenying Guo, Alex B Costa, Jiaxin Yang, Jianrong Wang, Kirill S Lobachev

Nucleic Acids Res. 2023 May 8; 51(8): 3722–3734. Published online 2023 Mar 15. doi: 10.1093/nar/gkad153

PMCID:: PMC10164571

Abstract Article PDF–4.4M

Select item 96309866.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 92098117.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 87489888.

Mechanism for inverted-repeat recombination induced by a replication fork barrier

Léa Marie, Lorraine S. Symington

Nat Commun. 2022; 13: 32. Published online 2022 Jan 10. doi: 10.1038/s41467-021-27443-w

PMCID:: PMC8748988

Abstract Article PDF–24M

Select item 82376529.

Rtt105 promotes high-fidelity DNA replication and repair by regulating the single-stranded DNA-binding factor RPA

Xuejie Wang, Yang Dong, Xiaocong Zhao, Jinbao Li, Jordan Lee, Zhenxin Yan, Shuangshuang Yang, Wenqiang Wu, Ximiao Hou, Guangxue Liu, Yueyue Zhang, Lun Song, Gang Cai, Qing Li, Grzegorz Ira, Xinghua Zhang, Xuefeng Chen

Proc Natl Acad Sci U S A. 2021 Jun 22; 118(25): e2106393118. Published online 2021 Jun 17. doi: 10.1073/pnas.2106393118

PMCID:: PMC8237652

Abstract Article PDF–2.5M

Select item 823060310.

Rad52 Oligomeric N-Terminal Domain Stabilizes Rad51 Nucleoprotein Filaments and Contributes to Their Protection against Srs2

Emilie Ma, Laurent Maloisel, Léa Le Falher, Raphaël Guérois, Eric Coïc

Cells. 2021 Jun; 10(6): 1467. Published online 2021 Jun 11. doi: 10.3390/cells10061467

Correction in:: Cells. 2021 Nov; 10(11): 3207.

PMCID:: PMC8230603

Abstract Article PDF–4.7M

Select item 812350811.

Complex Mechanisms of Antimony Genotoxicity in Budding Yeast Involves Replication and Topoisomerase I-Associated DNA Lesions, Telomere Dysfunction and Inhibition of DNA Repair

Ireneusz Litwin, Seweryn Mucha, Ewa Pilarczyk, Robert Wysocki, Ewa Maciaszczyk-Dziubinska

Int J Mol Sci. 2021 May; 22(9): 4510. Published online 2021 Apr 26. doi: 10.3390/ijms22094510

PMCID:: PMC8123508

Abstract Article PDF–29M

Select item 806601912.

Sir4 Deficiency Reverses Cell Senescence by Sub-Telomere Recombination

Jun Liu, Xiaojing Hong, Lihui Wang, Chao-Ya Liang, Jun-Ping Liu

Cells. 2021 Apr; 10(4): 778. Published online 2021 Apr 1. doi: 10.3390/cells10040778

PMCID:: PMC8066019

Abstract Article PDF–4.6M

Select item 805231213.

A unified alternative telomere lengthening pathway in yeast survivor cells

Zachary W. Kockler, Josep M. Comeron, Anna Malkova

Mol Cell. Author manuscript; available in PMC 2022 Apr 15.

Published in final edited form as: Mol Cell. 2021 Apr 15; 81(8): 1816–1829.e5. Published online 2021 Feb 26. doi: 10.1016/j.molcel.2021.02.004

PMCID:: PMC8052312

Abstract Article PDF–2.6M

Select item 796698214.

Rad52 SUMOylation functions as a molecular switch that determines a balance between the Rad51- and Rad59-dependent survivors

Ferose Charifi, Dmitri Churikov, Nadine Eckert-Boulet, Christopher Minguet, Frédéric Jourquin, Julien Hardy, Michael Lisby, Marie-Noëlle Simon, Vincent Géli

iScience. 2021 Mar 19; 24(3): 102231. Published online 2021 Feb 25. doi: 10.1016/j.isci.2021.102231