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Items: 1 to 20 of 47

1.
Structural and Comparative Analyses of Insects Suggest the Presence of an Ultra-Conserved Regulatory Element of the Genes Encoding Vacuolar-Type ATPase Subunits and Assembly Factors
Domenica Lovero, Damiano Porcelli, Luca Giordano, Claudio Lo Giudice, Ernesto Picardi, Graziano Pesole, Eugenia Pignataro, Antonio Palazzo, René Massimiliano Marsano
Biology (Basel) 2023 Aug; 12(8): 1127. Published online 2023 Aug 13. doi: 10.3390/biology12081127
PMCID:
PMC10452791
AbstractArticlePDF–10M
2.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
3.
Convergence of secretory, endosomal, and autophagic routes in trans-Golgi–associated lysosomes
Lingjian Zhou, Xutong Xue, Ke Yang, Zhi Feng, Min Liu, José C. Pastor-Pareja
J Cell Biol. 2023 Jan 2; 222(1): e202203045. Published online 2022 Oct 14. doi: 10.1083/jcb.202203045
PMCID:
PMC9577102
AbstractArticlePDF–15M
4.
FlyAtlas 2 in 2022: enhancements to the Drosophila melanogaster expression atlas
Sue A Krause, Gayle Overend, Julian A T Dow, David P Leader
Nucleic Acids Res. 2022 Jan 7; 50(D1): D1010–D1015. Published online 2021 Oct 29. doi: 10.1093/nar/gkab971
PMCID:
PMC8728208
AbstractArticlePDF–2.8M
5.
V-ATPase controls tumor growth and autophagy in a Drosophila model of gliomagenesis
Miriam Formica, Alessandra Maria Storaci, Irene Bertolini, Francesca Carminati, Helene Knævelsrud, Valentina Vaira, Thomas Vaccari
Autophagy. 2021; 17(12): 4442–4452. Published online 2021 May 12. doi: 10.1080/15548627.2021.1918915
PMCID:
PMC8726678
AbstractArticlePDF–3.6M
6.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
7.
Transcriptional Correlates of Chronic Alcohol Neuroadaptation in Drosophila Larvae
Amanda Anqueira-González, Jenny P. Acevedo-Gonzalez, Airined Montes-Mercado, Claudia Irizarry-Hernández, Nicolás L. Fuenzalida-Uribe, Alfredo Ghezzi
Front Behav Neurosci. 2021; 15: 768694. Published online 2021 Nov 4. doi: 10.3389/fnbeh.2021.768694
PMCID:
PMC8599819
AbstractArticlePDF–1.0M
8.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
9.
Acetyltransferase GCN5 regulates autophagy and lysosome biogenesis by targeting TFEB
Yusha Wang, Yewei Huang, Jiaqi Liu, Jinna Zhang, Mingming Xu, Zhiyuan You, Chao Peng, Zhefeng Gong, Wei Liu
EMBO Rep. 2020 Jan 7; 21(1): e48335. Published online 2019 Nov 21. doi: 10.15252/embr.201948335
PMCID:
PMC6945067
AbstractArticlePDF–3.1M
10.
A tissue and temporal-specific autophagic switch controls Drosophila pre-metamorphic nutritional checkpoints
Xueyang Pan, Thomas P. Neufeld, Michael B. O’Connor
Curr Biol. Author manuscript; available in PMC 2020 Sep 9.
Published in final edited form as: Curr Biol. 2019 Sep 9; 29(17): 2840–2851.e4. Published online 2019 Aug 15. doi: 10.1016/j.cub.2019.07.027
PMCID:
PMC6736734
AbstractArticlePDF–1.4M
11.
Specific V-ATPase expression sub-classifies IDHwt lower-grade gliomas and impacts glioma growth in vivo
Andrea Terrasi, Irene Bertolini, Cristina Martelli, Gabriella Gaudioso, Andrea Di Cristofori, Alessandra Maria Storaci, Miriam Formica, Silvano Bosari, Manuela Caroli, Luisa Ottobrini, Thomas Vaccari, Valentina Vaira
EBioMedicine. 2019 Mar; 41: 214–224. Published online 2019 Feb 5. doi: 10.1016/j.ebiom.2019.01.052
PMCID:
PMC6441867
AbstractArticlePDF–4.3M
12.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
13.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
14.
Molecular mechanism and functional significance of acid generation in the Drosophila midgut
Gayle Overend, Yuan Luo, Louise Henderson, Angela E. Douglas, Shireen A. Davies, Julian A. T. Dow
Sci Rep. 2016; 6: 27242. Published online 2016 Jun 2. doi: 10.1038/srep27242
PMCID:
PMC4890030
AbstractArticlePDF–1.4M
15.
Control of lysosomal biogenesis and Notch-dependent tissue patterning by components of the TFEB-V-ATPase axis in Drosophila melanogaster
Emiliana Tognon, Francis Kobia, Ilaria Busi, Arianna Fumagalli, Federico De Masi, Thomas Vaccari
Autophagy. 2016 Mar; 12(3): 499–514. Published online 2016 Jan 4. doi: 10.1080/15548627.2015.1134080
PMCID:
PMC4836007
AbstractArticlePDF–1.9M
16.
Drosophila Mitf regulates the V-ATPase and the lysosomal-autophagic pathway
Valentina Bouché, Alma Perez Espinosa, Luigi Leone, Marco Sardiello, Andrea Ballabio, Juan Botas
Autophagy. 2016 Mar; 12(3): 484–498. Published online 2016 Jan 13. doi: 10.1080/15548627.2015.1134081
PMCID:
PMC4835958
AbstractArticlePDF–2.2M
17.
Mitf is a master regulator of the v-ATPase, forming a control module for cellular homeostasis with v-ATPase and TORC1
Tianyi Zhang, Qingxiang Zhou, Margret Helga Ogmundsdottir, Katrin Möller, Robert Siddaway, Lionel Larue, Michael Hsing, Sek Won Kong, Colin Ronald Goding, Arnar Palsson, Eirikur Steingrimsson, Francesca Pignoni
J Cell Sci. 2015 Aug 1; 128(15): 2938–2950. doi: 10.1242/jcs.173807
PMCID:
PMC4540953
AbstractArticle
18.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
19.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
20.
Compensatory branching morphogenesis of stalk cells in the Drosophila trachea
Deanne Francis, Amin S. Ghabrial
Development. 2015 Jun 1; 142(11): 2048–2057. doi: 10.1242/dev.119602
PMCID:
PMC4460740
AbstractArticle

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