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Select item 109627591.

A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins

Annabel Guichard, Shenzhao Lu, Oguz Kanca, Daniel Bressan, Yan Huang, Mengqi Ma, Sara Sanz Juste, Jonathan C. Andrews, Kristy L. Jay, Marketta Sneider, Ruth Schwartz, Mei-Chu Huang, Danqing Bei, Hongling Pan, Liwen Ma, Wen-Wen Lin, Ankush Auradkar, Pranjali Bhagwat, Soo Park, Kenneth H. Wan, Takashi Ohsako, Toshiyuki Takano-Shimizu, Susan E. Celniker, Michael F. Wangler, Shinya Yamamoto, Hugo J. Bellen, Ethan Bier

Cell Rep. Author manuscript; available in PMC 2024 Mar 25.

Published in final edited form as: Cell Rep. 2023 Aug 29; 42(8): 112842. Published online 2023 Jul 20. doi: 10.1016/j.celrep.2023.112842

PMCID:: PMC10962759

Abstract Article PDF–3.0M

Select item 92152502.

Identification of Cellular Genes Involved in Baculovirus GP64 Trafficking to the Plasma Membrane

Jeffrey J. Hodgson, Nicolas Buchon, Gary W. Blissard

J Virol. 2022 Jun; 96(12): e00215-22. Published online 2022 May 24. doi: 10.1128/jvi.00215-22

PMCID:: PMC9215250

Abstract Article PDF–3.0M

Select item 86644863.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 82736004.

Interactions and Feedbacks in E-Cadherin Transcriptional Regulation

Miguel Ramirez Moreno, Przemyslaw A. Stempor, Natalia A. Bulgakova

Front Cell Dev Biol. 2021; 9: 701175. Published online 2021 Jun 28. doi: 10.3389/fcell.2021.701175

PMCID:: PMC8273600

Abstract Article PDF–1.5M

Select item 80994795.

Modeling human brain tumors in flies, worms, and zebrafish: From proof of principle to novel therapeutic targets

Uswa Shahzad, Michael S Taccone, Sachin A Kumar, Hidehiro Okura, Stacey Krumholtz, Joji Ishida, Coco Mine, Kyle Gouveia, Julia Edgar, Christian Smith, Madeline Hayes, Xi Huang, W Brent Derry, Michael D Taylor, James T Rutka

Neuro Oncol. 2021 May; 23(5): 718–731. Published online 2020 Dec 30. doi: 10.1093/neuonc/noaa306

PMCID:: PMC8099479

Abstract Article PDF–10M

Select item 75039736.

Investigating Developmental and Epileptic Encephalopathy Using Drosophila melanogaster

Akari Takai, Masamitsu Yamaguchi, Hideki Yoshida, Tomohiro Chiyonobu

Int J Mol Sci. 2020 Sep; 21(17): 6442. Published online 2020 Sep 3. doi: 10.3390/ijms21176442

PMCID:: PMC7503973

Abstract Article PDF–1.6M

Select item 67032257.

Spinster Controls Dpp Signaling during Glial Migration in the Drosophila Eye

Yeliz Yuva-Aydemir, Ann-Christin Bauke, Christian Klämbt

J Neurosci. 2011 May 11; 31(19): 7005–7015. doi: 10.1523/JNEUROSCI.0459-11.2011

PMCID:: PMC6703225

Abstract Article PDF–3.9M

Select item 63734548.

Entry is a rate-limiting step for viral infection in a Drosophila melanogaster model of pathogenesis

Sara Cherry, Norbert Perrimon

Nat Immunol. Author manuscript; available in PMC 2019 Feb 13.

Published in final edited form as: Nat Immunol. 2004 Jan; 5(1): 81–87. Published online 2003 Dec 14. doi: 10.1038/ni1019

PMCID:: PMC6373454

Abstract Article PDF–666K

Select item 62333239.

Integration of Drosophila and Human Genetics to understand Notch signaling related diseases

Jose L. Salazar, Shinya Yamamoto

Adv Exp Med Biol. Author manuscript; available in PMC 2018 Nov 13.

Published in final edited form as: Adv Exp Med Biol. 2018; 1066: 141–185. doi: 10.1007/978-3-319-89512-3_8

PMCID:: PMC6233323

Abstract Article PDF–2.0M

Select item 589770310.

Biogenesis of zinc storage granules in Drosophila melanogaster

Carlos Tejeda-Guzmán, Abraham Rosas-Arellano, Thomas Kroll, Samuel M. Webb, Martha Barajas-Aceves, Beatriz Osorio, Fanis Missirlis

J Exp Biol. 2018 Mar 15; 221(6): jeb168419. doi: 10.1242/jeb.168419

PMCID:: PMC5897703

Abstract Article

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 556080113.

Genomic Analysis of Genotype-by-Social Environment Interaction for Drosophila melanogaster Aggressive Behavior

Palle Duun Rohde, Bryn Gaertner, Kirsty Ward, Peter Sørensen, Trudy F. C. Mackay

Genetics. 2017 Aug; 206(4): 1969–1984. Published online 2017 May 26. doi: 10.1534/genetics.117.200642

PMCID:: PMC5560801

Abstract Article PDF–887K

Select item 478205214.

Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs

Ronit Wilk, Jack Hu, Dmitry Blotsky, Henry M. Krause

Genes Dev. 2016 Mar 1; 30(5): 594–609. doi: 10.1101/gad.276931.115

PMCID:: PMC4782052

Abstract Article PDF–883K

Select item 473800515.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 464399816.

Identification of Atg2 and ArfGAP1 as Candidate Genetic Modifiers of the Eye Pigmentation Phenotype of Adaptor Protein-3 (AP-3) Mutants in Drosophila melanogaster

Imilce A. Rodriguez-Fernandez, Esteban C. Dell’Angelica

PLoS One. 2015; 10(11): e0143026. Published online 2015 Nov 13. doi: 10.1371/journal.pone.0143026

PMCID:: PMC4643998

Abstract Article PDF–2.6M

Select item 452833017.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832918.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288719.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152720.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

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