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Select item 112445261.

N-terminal acetylation of Set1-COMPASS fine-tunes H3K4 methylation patterns

Hyeonju Woo, Junsoo Oh, Yong-Joon Cho, Goo Taeg Oh, Seon-Young Kim, Kisoon Dan, Dohyun Han, Jung-Shin Lee, TaeSoo Kim

Sci Adv. 2024 Jul 12; 10(28): eadl6280. Published online 2024 Jul 12. doi: 10.1126/sciadv.adl6280

PMCID:: PMC11244526

Abstract Article PDF–10M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 102333683.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 96309864.

A balancing act: interactions within NuA4/TIP60 regulate picNuA4 function in Saccharomyces cerevisiae and humans

Phoebe Y T Lu, Alyssa C Kirlin, Maria J Aristizabal, Hilary T Brewis, Nancy Lévesque, Dheva T Setiaputra, Nikita Avvakumov, Joris J Benschop, Marian Groot Koerkamp, Frank C P Holstege, Nevan J Krogan, Calvin K Yip, Jacques Côté, Michael S Kobor

Genetics. 2022 Nov; 222(3): iyac136. Published online 2022 Sep 6. doi: 10.1093/genetics/iyac136

PMCID:: PMC9630986

Abstract Article PDF–2.2M

Select item 92098115.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 91298796.

Mitotically heritable, RNA polymerase II-independent H3K4 dimethylation stimulates INO1 transcriptional memory

Bethany Sump, Donna G Brickner, Agustina D'Urso, Seo Hyun Kim, Jason H Brickner

eLife. 2022; 11: e77646. Published online 2022 May 17. doi: 10.7554/eLife.77646

PMCID:: PMC9129879

Abstract Article PDF–11M

Select item 85274967.

Distinct requirements for the COMPASS core subunits Set1, Swd1, and Swd3 during meiosis in the budding yeast Saccharomyces cerevisiae

Brandon M Trainor, Kerri Ciccaglione, Miranda Czymek, Michael J Law

G3 (Bethesda) 2021 Nov; 11(11): jkab283. Published online 2021 Aug 5. doi: 10.1093/g3journal/jkab283

PMCID:: PMC8527496

Abstract Article PDF–522K

Select item 79460258.

Genetic interaction mapping informs integrative structure determination of protein complexes

Hannes Braberg, Ignacia Echeverria, Stefan Bohn, Peter Cimermancic, Anthony Shiver, Richard Alexander, Jiewei Xu, Michael Shales, Raghuvar Dronamraju, Shuangying Jiang, Gajendradhar Dwivedi, Derek Bogdanoff, Kaitlin K. Chaung, Ruth Hüttenhain, Shuyi Wang, David Mavor, Riccardo Pellarin, Dina Schneidman, Joel S. Bader, James S. Fraser, John Morris, James E. Haber, Brian D. Strahl, Carol A. Gross, Junbiao Dai, Jef D. Boeke, Andrej Sali, Nevan J. Krogan

Science. Author manuscript; available in PMC 2021 Jun 11.

Published in final edited form as: Science. 2020 Dec 11; 370(6522): eaaz4910. doi: 10.1126/science.aaz4910

PMCID:: PMC7946025

Abstract Article PDF–3.4M

Select item 77187519.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 703968210.

Structural basis for COMPASS recognition of an H2B-ubiquitinated nucleosome

Evan J Worden, Xiangbin Zhang, Cynthia Wolberger

eLife. 2020; 9: e53199. Published online 2020 Jan 10. doi: 10.7554/eLife.53199

PMCID:: PMC7039682

Abstract Article PDF–19M

Select item 626545711.

Crosstalk among Set1 complex subunits involved in H2B ubiquitylation-dependent H3K4 methylation

Jongcheol Jeon, Robert K McGinty, Tom W Muir, Jung-Ae Kim, Jaehoon Kim

Nucleic Acids Res. 2018 Nov 30; 46(21): 11129–11143. Published online 2018 Oct 16. doi: 10.1093/nar/gky920

PMCID:: PMC6265457

Abstract Article PDF–3.8M

Select item 625871012.

Architecture and subunit arrangement of the complete Saccharomyces cerevisiae COMPASS complex

Yanxing Wang, Zhanyu Ding, Xiangyang Liu, Yu Bao, Min Huang, Catherine C. L. Wong, Xiaoyu Hong, Yao Cong

Sci Rep. 2018; 8: 17405. Published online 2018 Nov 27. doi: 10.1038/s41598-018-35609-8

PMCID:: PMC6258710

Abstract Article PDF–2.2M

Select item 621571313.

Systematic Analysis of Complex Genetic Interactions

Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers

Science. Author manuscript; available in PMC 2018 Nov 4.

Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729

PMCID:: PMC6215713

Abstract Article PDF–1.9M

Select item 616828614.

Tri-methylation of histone H3 lysine 4 facilitates gene expression in ageing cells

Cristina Cruz, Monica Della Rosa, Christel Krueger, Qian Gao, Dorottya Horkai, Michelle King, Lucy Field, Jonathan Houseley

eLife. 2018; 7: e34081. Published online 2018 Oct 2. doi: 10.7554/eLife.34081

PMCID:: PMC6168286

Abstract Article PDF–2.4M

Select item 612638415.

Cell Lysate Microarray for Mapping the Network of Genetic Regulators for Histone Marks

Li Cheng, Cheng-xi Liu, Shuangying Jiang, Sha Hou, Jin-guo Huang, Zi-qing Chen, Yang-yang Sun, Huan Qi, He-wei Jiang, Jing-fang Wang, Yi-ming Zhou, Daniel M. Czajkowsky, Junbiao Dai, Sheng-ce Tao

Mol Cell Proteomics. 2018 Sep; 17(9): 1720–1736. Published online 2018 Jun 5. doi: 10.1074/mcp.RA117.000550

PMCID:: PMC6126384

Abstract Article PDF–4.2M

Select item 611694916.

A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A

Sultan Ciftci-Yilmaz, Wei-Chun Au, Prashant K. Mishra, Jessica R. Eisenstatt, Joy Chang, Anthony R. Dawson, Iris Zhu, Mahfuzur Rahman, Sven Bilke, Michael Costanzo, Anastasia Baryshnikova, Chad L. Myers, Paul S. Meltzer, David Landsman, Richard E. Baker, Charles Boone, Munira A. Basrai

Genetics. 2018 Sep; 210(1): 203–218. Published online 2018 Jul 16. doi: 10.1534/genetics.118.301305

PMCID:: PMC6116949

Abstract Article PDF–2.1M

Select item 610894017.

Crystal Structure of the COMPASS H3K4 Methyltransferase Catalytic Module

Peter L. Hsu, Heng Li, Ho-Tak Lau, Calvin Leonen, Abhinav Dhall, Shao-En Ong, Champak Chatterjee, Ning Zheng

Cell. Author manuscript; available in PMC 2019 Aug 23.

Published in final edited form as: Cell. 2018 Aug 23; 174(5): 1106–1116.e9. Published online 2018 Aug 9. doi: 10.1016/j.cell.2018.06.038

PMCID:: PMC6108940

Abstract Article PDF–1.2M

Select item 610893618.

Structure and conformational dynamics of a COMPASS histone H3K4 methyltransferase complex

Qianhui Qu, Yohhei Takahashi, Yidai Yang, Hongli Hu, Yan Zhang, Joseph S. Brunzelle, Jean-Francois Couture, Ali Shilatifard, Georgios Skiniotis

Cell. Author manuscript; available in PMC 2019 Aug 23.

Published in final edited form as: Cell. 2018 Aug 23; 174(5): 1117–1126.e12. Published online 2018 Aug 9. doi: 10.1016/j.cell.2018.07.020

PMCID:: PMC6108936

Abstract Article PDF–1.2M

Select item 592252819.

Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs

Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen

PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319

PMCID:: PMC5922528

Abstract Article PDF–7.1M

Select item 582852920.

The PHD finger protein Spp1 has distinct functions in the Set1 and the meiotic DSB formation complexes

Céline Adam, Raphaël Guérois, Anna Citarella, Laura Verardi, Florine Adolphe, Claire Béneut, Vérane Sommermeyer, Claire Ramus, Jérôme Govin, Yohann Couté, Valérie Borde

PLoS Genet. 2018 Feb; 14(2): e1007223. Published online 2018 Feb 14. doi: 10.1371/journal.pgen.1007223

PMCID:: PMC5828529

Abstract Article PDF–4.5M

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